Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01981

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,214,914	-		MIT1002_01980	0.19	+0.8
2,215,065	-		MIT1002_01980	0.37	+2.0
2,215,067	-		MIT1002_01980	0.37	+0.9
2,215,080	-		MIT1002_01980	0.39	-1.3
2,215,085	+		MIT1002_01980	0.39	-0.4
2,215,108	+		MIT1002_01980	0.42	-2.2
2,215,108	+		MIT1002_01980	0.42	-0.6
2,215,158	-		MIT1002_01980	0.48	-0.5
2,215,170	-		MIT1002_01980	0.49	+2.0
2,215,268	-		MIT1002_01980	0.61	-0.4
2,215,268	-		MIT1002_01980	0.61	-0.4
2,215,345	+		MIT1002_01980	0.70	+0.3
2,215,369	+		MIT1002_01980	0.73	-0.7
2,215,377	-		MIT1002_01980	0.73	+1.3
2,215,408	+		MIT1002_01980	0.77	+1.0
2,215,517	-				+0.7
2,215,620	-				+0.5
2,215,631	+				-0.3
2,215,633	+				-0.6
2,215,643	+				+0.1
2,215,651	+				-0.9
2,215,659	-				+0.4
2,215,659	-				-1.9
2,215,696	+				+1.6
2,215,813	+				-1.3
2,215,821	-				-0.0
2,215,821	-				-1.9
2,215,821	-				-1.3
2,215,821	-				+0.4
2,215,890	+				-3.0
2,215,999	-				-3.0
2,216,018	+				-2.0
2,216,018	+				-1.7
2,216,035	+		MIT1002_01981	0.11	-3.2
2,216,059	+		MIT1002_01981	0.12	-2.1
2,216,117	+		MIT1002_01981	0.16	+0.7
2,216,120	-		MIT1002_01981	0.16	-3.6
2,216,167	-		MIT1002_01981	0.19	+0.1
2,216,176	+		MIT1002_01981	0.20	-1.3
2,216,184	+		MIT1002_01981	0.20	-1.5
2,216,184	+		MIT1002_01981	0.20	-2.7
2,216,184	+		MIT1002_01981	0.20	-0.3
2,216,184	+		MIT1002_01981	0.20	-2.7
2,216,184	-		MIT1002_01981	0.20	-2.3
2,216,186	+		MIT1002_01981	0.21	-0.1
2,216,186	+		MIT1002_01981	0.21	-3.6
2,216,189	+		MIT1002_01981	0.21	-0.8
2,216,192	-		MIT1002_01981	0.21	-2.2
2,216,197	-		MIT1002_01981	0.21	-0.6
2,216,197	-		MIT1002_01981	0.21	-1.6
2,216,216	+		MIT1002_01981	0.23	-1.8
2,216,216	+		MIT1002_01981	0.23	-1.2
2,216,269	-		MIT1002_01981	0.26	-3.2
2,216,487	-		MIT1002_01981	0.40	-2.8
2,216,497	+		MIT1002_01981	0.41	-5.4
2,216,544	+		MIT1002_01981	0.44	-1.0
2,216,567	+		MIT1002_01981	0.46	-1.6
2,216,587	-		MIT1002_01981	0.47	+0.1
2,216,631	+		MIT1002_01981	0.50	-1.7
2,216,663	-		MIT1002_01981	0.52	-2.4
2,216,681	-		MIT1002_01981	0.53	-1.2
2,216,681	-		MIT1002_01981	0.53	-3.9
2,216,757	+		MIT1002_01981	0.58	-1.2
2,217,772	+				+1.0
2,217,944	+		MIT1002_01983	0.14	-1.9
2,217,944	+		MIT1002_01983	0.14	-2.0
2,218,020	-		MIT1002_01983	0.21	-1.6
2,218,052	+		MIT1002_01983	0.24	-0.3
2,218,052	+		MIT1002_01983	0.24	+0.4
2,218,059	+		MIT1002_01983	0.25	+0.4
2,218,060	-		MIT1002_01983	0.25	-0.1
2,218,060	-		MIT1002_01983	0.25	+0.3
2,218,060	-		MIT1002_01983	0.25	-0.6
2,218,102	+		MIT1002_01983	0.29	-0.1
2,218,144	+		MIT1002_01983	0.33	-1.2
2,218,247	-		MIT1002_01983	0.42	-1.8
2,218,264	+		MIT1002_01983	0.43	+0.7
2,218,274	-		MIT1002_01983	0.44	+1.2
2,218,305	-		MIT1002_01983	0.47	+0.8