Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01966

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,195,569	-		MIT1002_01965	0.11	-0.9
2,195,646	+		MIT1002_01965	0.21	-0.6
2,195,695	+		MIT1002_01965	0.28	-1.2
2,195,695	+		MIT1002_01965	0.28	-1.3
2,195,695	+		MIT1002_01965	0.28	+0.5
2,195,703	-		MIT1002_01965	0.29	-1.8
2,195,731	+		MIT1002_01965	0.33	-2.0
2,195,769	+		MIT1002_01965	0.38	+2.3
2,195,776	-		MIT1002_01965	0.39	-1.2
2,195,914	-		MIT1002_01965	0.57	+1.1
2,196,047	-		MIT1002_01965	0.75	+0.1
2,196,056	+		MIT1002_01965	0.76	+0.1
2,196,075	-		MIT1002_01965	0.79	-0.2
2,196,077	+		MIT1002_01965	0.79	+1.1
2,196,093	+		MIT1002_01965	0.81	-0.5
2,196,274	-				-1.2
2,196,307	-				+0.1
2,196,315	+				+0.3
2,196,468	-				-0.5
2,196,474	+				-1.4
2,196,474	+				-0.1
2,196,479	+				+0.5
2,196,479	+				-2.8
2,196,482	-				+0.7
2,196,487	-				-2.2
2,196,544	-				-2.7
2,196,583	+				+0.4
2,196,595	+				-2.7
2,196,601	-				+0.8
2,196,601	-				-0.3
2,196,603	-				-1.8
2,196,615	-				-2.2
2,196,618	+				+0.4
2,196,707	-				+0.1
2,196,835	+		MIT1002_01966	0.11	+0.8
2,196,947	+		MIT1002_01966	0.15	+0.4
2,196,947	+		MIT1002_01966	0.15	-1.0
2,196,953	+		MIT1002_01966	0.15	-1.1
2,196,955	-		MIT1002_01966	0.16	+0.8
2,196,968	+		MIT1002_01966	0.16	-0.8
2,196,968	+		MIT1002_01966	0.16	-2.4
2,196,969	-		MIT1002_01966	0.16	-0.2
2,196,976	-		MIT1002_01966	0.16	-0.1
2,196,976	-		MIT1002_01966	0.16	+0.4
2,197,044	-		MIT1002_01966	0.19	+0.2
2,197,049	-		MIT1002_01966	0.19	+0.3
2,197,094	+		MIT1002_01966	0.21	-0.9
2,197,097	-		MIT1002_01966	0.21	+0.4
2,197,097	-		MIT1002_01966	0.21	-0.9
2,197,151	+		MIT1002_01966	0.23	-1.0
2,197,151	+		MIT1002_01966	0.23	-0.9
2,197,159	-		MIT1002_01966	0.23	-1.6
2,197,159	-		MIT1002_01966	0.23	-1.6
2,197,159	-		MIT1002_01966	0.23	-0.7
2,197,159	-		MIT1002_01966	0.23	-2.2
2,197,159	-		MIT1002_01966	0.23	-1.3
2,197,171	+		MIT1002_01966	0.24	-0.0
2,197,179	-		MIT1002_01966	0.24	-3.0
2,197,197	-		MIT1002_01966	0.25	-0.4
2,197,210	-		MIT1002_01966	0.25	-1.7
2,197,247	+		MIT1002_01966	0.27	+0.3
2,197,252	+		MIT1002_01966	0.27	-0.2
2,197,252	+		MIT1002_01966	0.27	-1.4
2,197,269	+		MIT1002_01966	0.28	-0.0
2,197,269	+		MIT1002_01966	0.28	-0.4
2,197,296	-		MIT1002_01966	0.29	-0.7
2,197,349	+		MIT1002_01966	0.31	+0.1
2,197,445	+		MIT1002_01966	0.34	-1.3
2,197,462	+		MIT1002_01966	0.35	-1.0
2,197,485	+		MIT1002_01966	0.36	+0.9
2,197,506	-		MIT1002_01966	0.37	-1.7
2,197,508	+		MIT1002_01966	0.37	-1.5
2,197,584	+		MIT1002_01966	0.40	-2.2
2,197,617	+		MIT1002_01966	0.41	-1.1
2,197,625	-		MIT1002_01966	0.41	-0.3
2,197,698	-		MIT1002_01966	0.44	-2.8
2,197,703	-		MIT1002_01966	0.44	+1.2
2,197,703	-		MIT1002_01966	0.44	-1.2
2,197,703	-		MIT1002_01966	0.44	-0.2
2,197,703	-		MIT1002_01966	0.44	-1.1
2,197,709	+		MIT1002_01966	0.45	-1.5
2,197,717	-		MIT1002_01966	0.45	-2.5
2,197,799	-		MIT1002_01966	0.48	-0.4
2,197,812	-		MIT1002_01966	0.48	-1.6
2,197,858	-		MIT1002_01966	0.50	-2.1
2,197,862	-		MIT1002_01966	0.50	+1.3
2,197,885	+		MIT1002_01966	0.51	-2.3
2,197,914	+		MIT1002_01966	0.52	-1.3
2,197,914	+		MIT1002_01966	0.52	-1.1
2,197,914	+		MIT1002_01966	0.52	-1.8
2,197,922	-		MIT1002_01966	0.53	-1.2
2,197,976	-		MIT1002_01966	0.55	-0.6
2,198,018	-		MIT1002_01966	0.56	+0.9
2,198,093	+		MIT1002_01966	0.59	-2.8
2,198,139	-		MIT1002_01966	0.61	-1.1
2,198,197	+		MIT1002_01966	0.63	-1.0
2,198,197	+		MIT1002_01966	0.63	-0.1
2,198,218	+		MIT1002_01966	0.64	-3.4
2,198,243	+		MIT1002_01966	0.65	-2.8
2,198,251	-		MIT1002_01966	0.65	-2.5
2,198,268	-		MIT1002_01966	0.66	-1.2
2,198,332	+		MIT1002_01966	0.69	+0.2
2,198,337	+		MIT1002_01966	0.69	-3.0
2,198,357	+		MIT1002_01966	0.69	-1.7
2,198,507	+		MIT1002_01966	0.75	+0.4
2,198,525	-		MIT1002_01966	0.76	+2.7
2,198,539	+		MIT1002_01966	0.76	-0.5
2,198,547	-		MIT1002_01966	0.77	+0.4
2,198,552	-		MIT1002_01966	0.77	-0.0
2,198,608	-		MIT1002_01966	0.79	+0.4
2,198,616	-		MIT1002_01966	0.79	-2.4
2,198,642	+		MIT1002_01966	0.80	+0.2
2,198,650	-		MIT1002_01966	0.81	-0.1
2,198,658	-		MIT1002_01966	0.81	-2.1
2,198,710	+		MIT1002_01966	0.83	-1.5
2,198,712	+		MIT1002_01966	0.83	-0.2
2,198,799	-		MIT1002_01966	0.86	-0.7
2,198,917	+				-4.0
2,198,995	+				-0.5
2,199,005	+				-0.6
2,199,005	+				-1.5
2,199,005	+				-0.4
2,199,005	+				-0.3
2,199,005	+				-0.3
2,199,013	-				-2.2
2,199,013	-				-1.9
2,199,038	-				+0.9
2,199,154	+				-0.3
2,199,185	-				-2.8
2,199,185	-				-0.7
2,199,242	-				-1.1