Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01964

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,192,727	+		MIT1002_01963	0.31	+0.7
2,192,754	+		MIT1002_01963	0.34	+2.2
2,192,869	+		MIT1002_01963	0.45	+0.6
2,192,869	+		MIT1002_01963	0.45	-1.2
2,192,911	+		MIT1002_01963	0.49	+0.8
2,192,944	+		MIT1002_01963	0.52	+0.2
2,192,947	-		MIT1002_01963	0.52	+0.7
2,192,949	+		MIT1002_01963	0.53	+2.1
2,192,952	-		MIT1002_01963	0.53	+0.1
2,193,155	-		MIT1002_01963	0.73	+0.8
2,193,238	+		MIT1002_01963	0.81	-1.3
2,193,319	-		MIT1002_01963	0.88	+1.1
2,193,367	+				+2.6
2,193,402	+				-0.1
2,193,682	-				-1.8
2,195,401	-				-0.7
2,195,533	+				+1.2
2,195,569	-		MIT1002_01965	0.11	-0.9
2,195,646	+		MIT1002_01965	0.21	-0.6
2,195,695	+		MIT1002_01965	0.28	-1.2
2,195,695	+		MIT1002_01965	0.28	-1.3
2,195,695	+		MIT1002_01965	0.28	+0.5
2,195,703	-		MIT1002_01965	0.29	-1.8
2,195,731	+		MIT1002_01965	0.33	-2.0
2,195,769	+		MIT1002_01965	0.38	+2.3
2,195,776	-		MIT1002_01965	0.39	-1.2
2,195,914	-		MIT1002_01965	0.57	+1.1
2,196,047	-		MIT1002_01965	0.75	+0.1
2,196,056	+		MIT1002_01965	0.76	+0.1
2,196,075	-		MIT1002_01965	0.79	-0.2
2,196,077	+		MIT1002_01965	0.79	+1.1
2,196,093	+		MIT1002_01965	0.81	-0.5
2,196,274	-				-1.2
2,196,307	-				+0.1
2,196,315	+				+0.3