Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01887

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,099,423	+				-1.9
2,099,423	+				+3.6
2,099,544	+		MIT1002_01886	0.14	-1.0
2,099,596	-		MIT1002_01886	0.20	+0.7
2,099,610	-		MIT1002_01886	0.21	-0.0
2,099,667	+		MIT1002_01886	0.27	-1.2
2,099,685	-		MIT1002_01886	0.29	+2.3
2,099,719	-		MIT1002_01886	0.33	-0.9
2,099,760	+		MIT1002_01886	0.37	+0.3
2,099,760	+		MIT1002_01886	0.37	+0.4
2,099,765	+		MIT1002_01886	0.38	+0.4
2,099,765	+		MIT1002_01886	0.38	-0.7
2,099,768	-		MIT1002_01886	0.38	-0.7
2,099,773	+		MIT1002_01886	0.38	-3.1
2,099,773	-		MIT1002_01886	0.38	-1.6
2,099,773	-		MIT1002_01886	0.38	+2.2
2,099,823	+		MIT1002_01886	0.44	+0.6
2,099,831	-		MIT1002_01886	0.45	-1.5
2,099,831	-		MIT1002_01886	0.45	-1.1
2,099,851	+		MIT1002_01886	0.47	-0.9
2,099,889	+		MIT1002_01886	0.51	+1.0
2,099,908	+		MIT1002_01886	0.53	-2.6
2,099,990	+		MIT1002_01886	0.61	+0.6
2,100,058	-		MIT1002_01886	0.68	+0.6
2,100,063	-		MIT1002_01886	0.69	-1.2
2,100,121	-		MIT1002_01886	0.75	-1.7
2,100,190	+		MIT1002_01886	0.82	-0.3
2,100,224	+		MIT1002_01886	0.86	-1.9
2,100,224	+		MIT1002_01886	0.86	-2.3
2,100,224	+		MIT1002_01886	0.86	-1.0
2,100,232	-		MIT1002_01886	0.87	-2.5
2,100,232	-		MIT1002_01886	0.87	-0.9
2,100,277	+				-2.1
2,100,349	+				+1.3
2,100,349	+				-0.4
2,100,366	-				+1.2
2,100,423	-		MIT1002_01887	0.11	-0.1
2,100,492	+		MIT1002_01887	0.24	+0.8
2,100,549	-		MIT1002_01887	0.34	+0.6
2,100,552	-		MIT1002_01887	0.34	+0.3
2,100,614	-		MIT1002_01887	0.46	+0.5
2,100,619	-		MIT1002_01887	0.46	-0.8
2,100,654	-		MIT1002_01887	0.53	+2.4
2,100,706	+		MIT1002_01887	0.62	+0.9
2,100,748	-		MIT1002_01887	0.70	+0.8
2,100,748	-		MIT1002_01887	0.70	+1.1
2,100,751	+		MIT1002_01887	0.70	-2.1
2,100,788	+		MIT1002_01887	0.77	-1.8
2,100,795	+		MIT1002_01887	0.78	-0.8
2,100,847	-		MIT1002_01887	0.88	+0.1
2,100,861	-				-0.2
2,100,967	-				+1.8
2,101,106	+				-0.7
2,101,108	+				-1.9
2,101,166	-				-1.2