Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01834

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
2,041,580	+				+1.3
2,041,774	+		MIT1002_01832	0.18	-0.6
2,041,795	-		MIT1002_01832	0.27	-2.8
2,041,835	+		MIT1002_01832	0.46	-1.4
2,041,930	-		MIT1002_01832	0.89	-1.5
2,041,955	-				+0.2
2,041,988	+				-1.1
2,041,990	-				-3.5
2,041,998	+				-1.9
2,042,006	-				-2.5
2,042,202	-				-2.8
2,042,301	+		MIT1002_01833	0.32	-3.6
2,042,370	-		MIT1002_01833	0.54	-0.3
2,042,383	-		MIT1002_01833	0.58	-1.6
2,042,456	+		MIT1002_01833	0.81	+1.5
2,042,464	-		MIT1002_01833	0.83	+0.7
2,042,488	+				-0.8
2,042,504	-				-2.3
2,042,519	-				-2.9
2,042,610	+				-2.2
2,042,758	+				-1.5
2,042,759	+				-3.6
2,042,839	+		MIT1002_01834	0.13	-2.4
2,042,844	+		MIT1002_01834	0.13	-2.7
2,042,852	-		MIT1002_01834	0.14	-2.1
2,042,985	+		MIT1002_01834	0.19	-1.0
2,043,026	-		MIT1002_01834	0.21	+0.4
2,043,127	-		MIT1002_01834	0.26	-2.2
2,043,139	+		MIT1002_01834	0.26	-3.2
2,043,250	-		MIT1002_01834	0.31	-1.2
2,043,296	-		MIT1002_01834	0.33	-1.9
2,043,311	+		MIT1002_01834	0.34	-3.6
2,043,475	-		MIT1002_01834	0.41	-3.7
2,043,497	+		MIT1002_01834	0.42	-2.7
2,043,497	+		MIT1002_01834	0.42	-4.5
2,043,497	+		MIT1002_01834	0.42	+0.4
2,043,497	+		MIT1002_01834	0.42	-2.9
2,043,497	+		MIT1002_01834	0.42	-2.2
2,043,497	+		MIT1002_01834	0.42	-0.8
2,043,505	-		MIT1002_01834	0.42	-1.8
2,043,505	-		MIT1002_01834	0.42	-2.7
2,043,553	+		MIT1002_01834	0.44	-2.7
2,043,581	+		MIT1002_01834	0.46	-1.5
2,043,700	+		MIT1002_01834	0.51	-1.9
2,043,758	-		MIT1002_01834	0.53	-1.4
2,043,859	-		MIT1002_01834	0.58	-2.8
2,043,861	-		MIT1002_01834	0.58	-1.1
2,043,873	-		MIT1002_01834	0.58	-0.7
2,043,897	-		MIT1002_01834	0.60	-2.2
2,043,916	-		MIT1002_01834	0.60	-2.8
2,043,933	+		MIT1002_01834	0.61	-0.6
2,043,941	-		MIT1002_01834	0.61	-2.7
2,043,941	-		MIT1002_01834	0.61	-3.5
2,043,941	-		MIT1002_01834	0.61	-3.5
2,043,941	-		MIT1002_01834	0.61	-2.5
2,043,977	+		MIT1002_01834	0.63	-1.1
2,043,977	-		MIT1002_01834	0.63	-4.1
2,044,027	+		MIT1002_01834	0.65	-0.6
2,044,082	-		MIT1002_01834	0.68	-0.3
2,044,090	-		MIT1002_01834	0.68	-2.6
2,044,116	+		MIT1002_01834	0.69	-2.7
2,044,177	-		MIT1002_01834	0.72	-2.8
2,044,182	-		MIT1002_01834	0.72	-5.2
2,044,220	+		MIT1002_01834	0.74	+1.0
2,044,257	-		MIT1002_01834	0.75	-2.3
2,044,397	+		MIT1002_01834	0.81	-2.4
2,044,418	-		MIT1002_01834	0.82	-0.7
2,044,449	+		MIT1002_01834	0.84	-2.4
2,044,581	+		MIT1002_01834	0.90	-1.6
2,044,590	+		MIT1002_01834	0.90	-3.4
2,044,605	+				-0.8
2,044,624	+				-2.3
2,044,657	-				-2.4
2,044,681	+				-2.0
2,044,695	-				-2.0
2,044,734	+				-3.5
2,044,857	-				-0.1
2,044,924	-				-0.1
2,045,265	-				-0.7
2,045,403	-		MIT1002_01836	0.15	+1.5
2,045,425	+		MIT1002_01836	0.19	-1.7
2,045,433	-		MIT1002_01836	0.20	+1.2
2,045,458	+		MIT1002_01836	0.23	-1.0
2,045,466	-		MIT1002_01836	0.24	-0.2
2,045,486	+		MIT1002_01836	0.27	+0.7
2,045,486	+		MIT1002_01836	0.27	-0.2
2,045,492	-		MIT1002_01836	0.28	+0.5
2,045,597	-		MIT1002_01836	0.42	-1.1
2,045,689	+		MIT1002_01836	0.55	-1.1
2,045,699	-		MIT1002_01836	0.56	-1.5
2,045,766	+		MIT1002_01836	0.66	-0.6
2,045,789	+		MIT1002_01836	0.69	-1.1
2,045,797	+		MIT1002_01836	0.70	+2.3
2,045,799	+		MIT1002_01836	0.70	+1.0