Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01752

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,945,930	-		MIT1002_01751	0.20	-1.4
1,945,970	+		MIT1002_01751	0.23	+1.2
1,946,012	+		MIT1002_01751	0.26	-0.1
1,946,025	-		MIT1002_01751	0.28	-3.4
1,946,028	+		MIT1002_01751	0.28	-0.7
1,946,028	+		MIT1002_01751	0.28	-0.6
1,946,028	+		MIT1002_01751	0.28	+2.2
1,946,044	+		MIT1002_01751	0.29	+1.4
1,946,045	+		MIT1002_01751	0.29	+0.9
1,946,102	+		MIT1002_01751	0.34	-0.2
1,946,102	+		MIT1002_01751	0.34	+0.0
1,946,110	-		MIT1002_01751	0.35	-0.8
1,946,110	-		MIT1002_01751	0.35	-0.2
1,946,110	-		MIT1002_01751	0.35	+1.4
1,946,145	+		MIT1002_01751	0.38	-0.6
1,946,153	-		MIT1002_01751	0.38	+0.6
1,946,160	+		MIT1002_01751	0.39	+1.5
1,946,175	+		MIT1002_01751	0.40	-0.6
1,946,226	-		MIT1002_01751	0.45	-1.2
1,946,267	+		MIT1002_01751	0.48	-2.5
1,946,268	+		MIT1002_01751	0.48	+3.8
1,946,287	+		MIT1002_01751	0.50	-1.3
1,946,382	-		MIT1002_01751	0.58	-2.9
1,946,420	+		MIT1002_01751	0.61	-2.2
1,946,539	-		MIT1002_01751	0.71	-0.6
1,946,541	+		MIT1002_01751	0.71	-0.2
1,946,578	+		MIT1002_01751	0.74	+1.6
1,946,578	+		MIT1002_01751	0.74	+0.4
1,946,596	-		MIT1002_01751	0.76	+0.7
1,946,633	+		MIT1002_01751	0.79	+0.9
1,946,686	+		MIT1002_01751	0.84	-0.2
1,946,776	+				+0.1
1,946,777	+				+1.1
1,946,787	+				+2.1
1,946,795	-				-3.0
1,946,941	-				-0.6
1,947,003	-				-0.1
1,947,110	+		MIT1002_01752	0.12	-2.7
1,947,111	+		MIT1002_01752	0.12	-3.2
1,947,118	-		MIT1002_01752	0.13	-4.6
1,947,176	-		MIT1002_01752	0.16	-0.3
1,947,199	+		MIT1002_01752	0.17	-2.1
1,947,257	-		MIT1002_01752	0.20	+0.2
1,947,271	+		MIT1002_01752	0.21	-1.5
1,947,271	+		MIT1002_01752	0.21	-0.7
1,947,271	+		MIT1002_01752	0.21	-1.1
1,947,271	+		MIT1002_01752	0.21	-2.8
1,947,271	+		MIT1002_01752	0.21	+0.4
1,947,271	+		MIT1002_01752	0.21	-3.8
1,947,272	+		MIT1002_01752	0.21	-2.2
1,947,279	-		MIT1002_01752	0.22	-1.3
1,947,280	-		MIT1002_01752	0.22	-1.3
1,947,285	-		MIT1002_01752	0.22	-1.5
1,947,285	-		MIT1002_01752	0.22	-2.6
1,947,290	-		MIT1002_01752	0.22	-2.7
1,947,304	+		MIT1002_01752	0.23	-0.8
1,947,304	+		MIT1002_01752	0.23	-0.4
1,947,319	-		MIT1002_01752	0.24	-3.3
1,947,356	-		MIT1002_01752	0.26	-0.7
1,947,398	+		MIT1002_01752	0.28	-3.4
1,947,398	+		MIT1002_01752	0.28	+0.6
1,947,398	+		MIT1002_01752	0.28	+0.2
1,947,406	-		MIT1002_01752	0.29	-2.0
1,947,406	-		MIT1002_01752	0.29	-3.2
1,947,523	+		MIT1002_01752	0.35	-3.2
1,947,523	+		MIT1002_01752	0.35	+2.0
1,947,531	-		MIT1002_01752	0.36	-2.7
1,947,605	-		MIT1002_01752	0.40	-3.2
1,947,619	+		MIT1002_01752	0.41	-2.2
1,947,759	+		MIT1002_01752	0.48	-3.4
1,947,759	+		MIT1002_01752	0.48	+1.0
1,947,811	-		MIT1002_01752	0.51	-0.7
1,947,816	+		MIT1002_01752	0.51	-0.7
1,947,824	-		MIT1002_01752	0.52	-0.1
1,947,863	+		MIT1002_01752	0.54	-0.7
1,947,863	+		MIT1002_01752	0.54	+0.4
1,948,128	+		MIT1002_01752	0.69	-1.7
1,948,136	-		MIT1002_01752	0.69	-1.6
1,948,136	-		MIT1002_01752	0.69	+3.4
1,948,136	-		MIT1002_01752	0.69	-3.1
1,948,163	+		MIT1002_01752	0.71	-0.4
1,948,171	-		MIT1002_01752	0.71	-2.9
1,948,199	-		MIT1002_01752	0.73	+0.8
1,948,203	+		MIT1002_01752	0.73	-1.7
1,948,203	+		MIT1002_01752	0.73	-1.7
1,948,211	-		MIT1002_01752	0.73	-0.7
1,948,219	-		MIT1002_01752	0.74	-0.1
1,948,335	+		MIT1002_01752	0.80	-0.7
1,948,335	+		MIT1002_01752	0.80	-0.9
1,948,335	+		MIT1002_01752	0.80	+0.1
1,948,342	+		MIT1002_01752	0.81	-3.0
1,948,343	-		MIT1002_01752	0.81	-0.2
1,948,343	-		MIT1002_01752	0.81	-0.6
1,948,361	+		MIT1002_01752	0.82	-0.4
1,948,369	-		MIT1002_01752	0.82	+0.2
1,948,369	-		MIT1002_01752	0.82	-2.2
1,948,375	-		MIT1002_01752	0.82	-1.5
1,948,422	-		MIT1002_01752	0.85	+0.8
1,948,453	+		MIT1002_01752	0.87	-1.3
1,948,483	+		MIT1002_01752	0.89	-3.1
1,948,483	+		MIT1002_01752	0.89	-2.2
1,948,491	-		MIT1002_01752	0.89	-3.0
1,948,514	+				-3.0
1,948,522	-				-2.4
1,948,597	+				-2.8
1,948,628	-				-1.9
1,948,664	-				-2.3
1,948,724	-				-0.9
1,948,859	-				+1.0
1,948,867	+				-0.7
1,948,905	+				-0.6
1,948,977	-				+0.7
1,948,979	+				+0.4
1,948,979	+				+1.3
1,948,990	+				+0.5
1,949,012	+				-0.8
1,949,042	+				+2.2
1,949,133	+		MIT1002_01753	0.16	+0.2
1,949,141	+		MIT1002_01753	0.18	+1.2
1,949,143	+		MIT1002_01753	0.18	-3.0
1,949,143	+		MIT1002_01753	0.18	-1.7
1,949,151	-		MIT1002_01753	0.20	+1.5
1,949,195	+		MIT1002_01753	0.31	-1.7
1,949,206	-		MIT1002_01753	0.34	+3.3
1,949,211	-		MIT1002_01753	0.35	-1.9
1,949,226	+		MIT1002_01753	0.39	-0.8
1,949,231	-		MIT1002_01753	0.40	-0.6
1,949,234	-		MIT1002_01753	0.41	+1.4
1,949,234	-		MIT1002_01753	0.41	-0.4
1,949,296	-		MIT1002_01753	0.57	+0.2
1,949,340	+		MIT1002_01753	0.68	+0.4
1,949,350	+		MIT1002_01753	0.70	+1.9
1,949,397	+		MIT1002_01753	0.82	-1.3
1,949,397	+		MIT1002_01753	0.82	-0.4
1,949,405	-		MIT1002_01753	0.84	+1.3
1,949,405	-		MIT1002_01753	0.84	+0.6
1,949,405	-		MIT1002_01753	0.84	-0.2
1,949,405	-		MIT1002_01753	0.84	+1.6
1,949,469	+				+0.4