Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01553

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,704,979	-				-1.0
1,705,043	+		MIT1002_01552	0.15	-0.3
1,705,056	-		MIT1002_01552	0.20	-0.7
1,705,089	+		MIT1002_01552	0.32	-0.9
1,705,276	-				+2.0
1,705,292	-				-1.5
1,705,295	-				+0.3
1,705,376	-				-1.5
1,705,488	-		MIT1002_01553	0.17	-1.2
1,705,674	+		MIT1002_01553	0.34	-2.2
1,705,686	+		MIT1002_01553	0.35	+0.5
1,705,849	+		MIT1002_01553	0.50	-2.9
1,705,882	+		MIT1002_01553	0.54	-2.7
1,705,882	+		MIT1002_01553	0.54	-0.9
1,705,882	+		MIT1002_01553	0.54	-0.2
1,705,890	-		MIT1002_01553	0.54	-3.7
1,705,890	-		MIT1002_01553	0.54	-1.8
1,705,890	-		MIT1002_01553	0.54	-4.4
1,705,890	-		MIT1002_01553	0.54	-2.1
1,705,890	-		MIT1002_01553	0.54	-0.2
1,705,890	-		MIT1002_01553	0.54	-3.2
1,705,890	-		MIT1002_01553	0.54	-1.1
1,705,910	-		MIT1002_01553	0.56	-1.6
1,706,004	-		MIT1002_01553	0.65	-4.5
1,706,011	-		MIT1002_01553	0.66	-3.0
1,706,026	-		MIT1002_01553	0.67	-4.8
1,706,070	+		MIT1002_01553	0.71	-4.5
1,706,077	+		MIT1002_01553	0.72	-7.5
1,706,078	-		MIT1002_01553	0.72	-1.3
1,706,137	-		MIT1002_01553	0.77	-1.6
1,706,250	+		MIT1002_01553	0.88	-0.5
1,706,516	-				-0.6
1,706,647	+				-0.0
1,706,822	-		MIT1002_01554	0.11	-2.9
1,706,868	+		MIT1002_01554	0.15	+0.7
1,706,876	+		MIT1002_01554	0.16	-0.9
1,706,878	+		MIT1002_01554	0.16	+1.1
1,706,886	-		MIT1002_01554	0.16	+0.1
1,707,065	+		MIT1002_01554	0.30	+0.3
1,707,094	-		MIT1002_01554	0.32	-2.0
1,707,118	-		MIT1002_01554	0.34	+0.5
1,707,126	+		MIT1002_01554	0.35	-0.4
1,707,172	-		MIT1002_01554	0.39	-1.6
1,707,172	-		MIT1002_01554	0.39	+1.8
1,707,172	-		MIT1002_01554	0.39	+0.5
1,707,178	+		MIT1002_01554	0.39	-0.3
1,707,178	+		MIT1002_01554	0.39	-1.3
1,707,204	-		MIT1002_01554	0.41	-1.7
1,707,252	+		MIT1002_01554	0.45	-0.1
1,707,261	-		MIT1002_01554	0.45	+1.8
1,707,272	+		MIT1002_01554	0.46	+1.3
1,707,280	-		MIT1002_01554	0.47	+1.5
1,707,280	-		MIT1002_01554	0.47	-0.8
1,707,280	-		MIT1002_01554	0.47	-2.2
1,707,280	-		MIT1002_01554	0.47	-0.2
1,707,280	-		MIT1002_01554	0.47	-0.9
1,707,316	-		MIT1002_01554	0.50	+0.8