Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01334
Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6 |
|---|---|---|---|---|---|
| remove | |||||
| 1,480,228 | - | +1.0 | |||
| 1,480,315 | + | +0.6 | |||
| 1,480,343 | + | -1.3 | |||
| 1,480,520 | + | -0.7 | |||
| 1,480,538 | - | +1.3 | |||
| 1,480,538 | - | -0.2 | |||
| 1,480,548 | + | -0.1 | |||
| 1,480,679 | - | -1.4 | |||
| 1,480,702 | - | -0.0 | |||
| 1,480,856 | + | MIT1002_01334 | 0.23 | +0.8 | |
| 1,480,862 | - | MIT1002_01334 | 0.24 | +0.4 | |
| 1,480,883 | + | MIT1002_01334 | 0.30 | -0.2 | |
| 1,480,891 | - | MIT1002_01334 | 0.32 | +1.1 | |
| 1,481,059 | + | MIT1002_01334 | 0.74 | +1.1 | |
| 1,481,095 | + | MIT1002_01334 | 0.83 | +1.0 | |
| 1,481,837 | + | -0.3 | |||
| 1,481,837 | + | -0.0 |
Or see this region's nucleotide sequence