Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01295

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,433,906	-		MIT1002_01294	0.42	-0.9
1,433,936	+		MIT1002_01294	0.44	-1.0
1,433,953	-		MIT1002_01294	0.46	-2.7
1,433,955	+		MIT1002_01294	0.46	-1.6
1,433,962	+		MIT1002_01294	0.46	+0.3
1,433,970	-		MIT1002_01294	0.47	-1.8
1,434,002	-		MIT1002_01294	0.49	-2.3
1,434,038	-		MIT1002_01294	0.52	-2.3
1,434,047	-		MIT1002_01294	0.53	-2.7
1,434,061	+		MIT1002_01294	0.54	-2.7
1,434,128	+		MIT1002_01294	0.59	-1.0
1,434,138	+		MIT1002_01294	0.60	+1.4
1,434,138	+		MIT1002_01294	0.60	-1.7
1,434,146	-		MIT1002_01294	0.60	-2.3
1,434,213	+		MIT1002_01294	0.66	-0.5
1,434,244	+		MIT1002_01294	0.68	-1.3
1,434,261	+		MIT1002_01294	0.69	-2.6
1,434,269	-		MIT1002_01294	0.70	-1.2
1,434,354	+		MIT1002_01294	0.77	-3.6
1,434,385	-		MIT1002_01294	0.79	-1.5
1,434,459	+		MIT1002_01294	0.85	-2.5
1,434,467	-		MIT1002_01294	0.85	-1.3
1,434,467	-		MIT1002_01294	0.85	-1.1
1,434,467	-		MIT1002_01294	0.85	+0.3
1,434,513	-		MIT1002_01294	0.89	+1.8
1,434,513	-		MIT1002_01294	0.89	-0.3
1,434,539	+				-1.7
1,434,623	+				-1.4
1,434,631	-				-1.0
1,434,886	-				-4.0
1,434,902	-				-1.5
1,435,134	-		MIT1002_01295	0.38	-1.8
1,435,147	-		MIT1002_01295	0.40	-1.5
1,435,194	+		MIT1002_01295	0.46	-2.1
1,435,284	+		MIT1002_01295	0.57	-1.8
1,435,296	+		MIT1002_01295	0.58	-2.5
1,435,296	+		MIT1002_01295	0.58	-2.5
1,435,304	-		MIT1002_01295	0.59	-0.5
1,435,318	+		MIT1002_01295	0.61	-2.4
1,435,318	+		MIT1002_01295	0.61	-0.9
1,435,406	+		MIT1002_01295	0.72	+0.6
1,435,416	+		MIT1002_01295	0.74	-1.4
1,435,450	-		MIT1002_01295	0.78	-3.6
1,435,469	-		MIT1002_01295	0.80	-1.2
1,435,549	-				-0.9
1,435,549	-				-3.2
1,435,592	-				-2.3
1,435,597	-				+0.1
1,435,597	-				-3.3
1,435,635	+				-3.0
1,435,635	+				+0.3
1,435,744	+				+0.5
1,435,744	+				+0.9
1,435,752	-				-3.0