Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01266

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,392,596	+				-1.2
1,392,596	+				+0.3
1,392,596	+				+2.0
1,392,604	-				-0.5
1,392,604	-				+0.4
1,392,671	-				-1.5
1,392,686	+		MIT1002_01265	0.11	+0.8
1,392,705	-		MIT1002_01265	0.13	-1.5
1,392,744	+		MIT1002_01265	0.17	-0.8
1,392,849	+		MIT1002_01265	0.29	+1.3
1,392,849	+		MIT1002_01265	0.29	+1.1
1,392,864	+		MIT1002_01265	0.31	-0.6
1,392,867	-		MIT1002_01265	0.31	+1.7
1,392,872	+		MIT1002_01265	0.32	+0.7
1,392,872	-		MIT1002_01265	0.32	+0.8
1,393,010	+		MIT1002_01265	0.47	+0.9
1,393,067	+		MIT1002_01265	0.53	+1.0
1,393,075	-		MIT1002_01265	0.54	+2.3
1,393,075	-		MIT1002_01265	0.54	+0.0
1,393,092	-		MIT1002_01265	0.56	+0.3
1,393,102	+		MIT1002_01265	0.57	+0.9
1,393,130	-		MIT1002_01265	0.60	+1.1
1,393,158	+		MIT1002_01265	0.63	-0.9
1,393,168	+		MIT1002_01265	0.65	-0.5
1,393,176	-		MIT1002_01265	0.65	+1.0
1,393,224	+		MIT1002_01265	0.71	+0.7
1,393,232	-		MIT1002_01265	0.72	+0.1
1,393,232	-		MIT1002_01265	0.72	+1.0
1,393,232	-		MIT1002_01265	0.72	+1.0
1,393,232	-		MIT1002_01265	0.72	-2.1
1,393,232	-		MIT1002_01265	0.72	-0.3
1,393,232	-		MIT1002_01265	0.72	+0.3
1,393,238	-		MIT1002_01265	0.72	+2.1
1,393,264	+		MIT1002_01265	0.75	+0.9
1,393,294	+		MIT1002_01265	0.79	-1.6
1,393,302	-		MIT1002_01265	0.79	+0.4
1,393,302	-		MIT1002_01265	0.79	+0.1
1,393,359	-		MIT1002_01265	0.86	+0.3
1,393,373	+		MIT1002_01265	0.87	-0.2
1,393,381	-		MIT1002_01265	0.88	+0.5
1,393,625	-				-3.1
1,393,645	+				-6.0
1,393,736	-		MIT1002_01266	0.11	-3.5
1,393,845	+		MIT1002_01266	0.17	-5.8
1,394,035	-		MIT1002_01266	0.29	-2.6
1,394,035	-		MIT1002_01266	0.29	+0.7
1,394,043	-		MIT1002_01266	0.29	-1.6
1,394,377	+		MIT1002_01266	0.49	-5.9
1,394,384	+		MIT1002_01266	0.50	-2.5
1,394,385	-		MIT1002_01266	0.50	-1.0
1,394,385	-		MIT1002_01266	0.50	-3.4
1,394,385	-		MIT1002_01266	0.50	+0.4
1,394,385	-		MIT1002_01266	0.50	-3.1
1,394,408	+		MIT1002_01266	0.51	-1.9
1,394,408	+		MIT1002_01266	0.51	-2.5
1,394,416	-		MIT1002_01266	0.52	-0.0
1,394,416	-		MIT1002_01266	0.52	-4.5
1,394,431	-		MIT1002_01266	0.52	-1.8
1,394,475	+		MIT1002_01266	0.55	-2.1
1,394,483	-		MIT1002_01266	0.56	-1.3
1,394,491	+		MIT1002_01266	0.56	-1.9
1,394,499	-		MIT1002_01266	0.57	-2.1
1,394,500	+		MIT1002_01266	0.57	-3.7
1,394,586	+		MIT1002_01266	0.62	-2.6
1,394,608	+		MIT1002_01266	0.63	-3.3
1,394,625	+		MIT1002_01266	0.64	+0.2
1,394,633	-		MIT1002_01266	0.65	-3.1
1,394,703	-		MIT1002_01266	0.69	-2.6
1,394,721	-		MIT1002_01266	0.70	-4.8
1,394,753	-		MIT1002_01266	0.72	-2.6
1,394,782	+		MIT1002_01266	0.73	-1.4
1,394,790	-		MIT1002_01266	0.74	-1.5
1,394,790	-		MIT1002_01266	0.74	-2.3
1,394,876	-		MIT1002_01266	0.79	-2.4
1,394,937	+		MIT1002_01266	0.83	+0.4
1,394,955	-		MIT1002_01266	0.84	-1.5
1,394,955	-		MIT1002_01266	0.84	-2.5
1,395,033	+		MIT1002_01266	0.89	-3.4
1,395,184	-				-2.0
1,395,295	-				-1.5
1,395,473	+				+0.2
1,395,478	+				-0.0
1,395,486	-				+0.7
1,395,486	-				-0.5
1,395,486	-				+0.2
1,395,486	-				+0.8
1,395,491	-				+0.3
1,395,621	-				+0.9
1,395,659	-				+1.0
1,395,664	-				+0.4
1,395,664	-				-1.0
1,395,679	+				-1.6
1,395,680	+				-2.2
1,395,688	-				+0.0
1,395,724	+				-1.7
1,395,770	-				+1.4
1,395,770	-				+0.2
1,395,795	-		MIT1002_01267	0.11	+0.1
1,395,814	+		MIT1002_01267	0.12	-0.5
1,395,822	-		MIT1002_01267	0.12	-1.7
1,395,885	+		MIT1002_01267	0.16	-0.3
1,395,885	-		MIT1002_01267	0.16	-0.1
1,395,898	+		MIT1002_01267	0.17	+0.1
1,395,906	-		MIT1002_01267	0.17	-1.6
1,395,914	+		MIT1002_01267	0.18	+2.2
1,395,919	+		MIT1002_01267	0.18	+0.0
1,395,933	+		MIT1002_01267	0.19	-0.1
1,395,933	+		MIT1002_01267	0.19	-2.6
1,395,933	+		MIT1002_01267	0.19	+0.4
1,395,941	-		MIT1002_01267	0.19	-1.2
1,395,941	-		MIT1002_01267	0.19	+3.3
1,395,941	-		MIT1002_01267	0.19	+1.2
1,395,941	-		MIT1002_01267	0.19	-0.3
1,395,941	-		MIT1002_01267	0.19	-0.3
1,395,941	-		MIT1002_01267	0.19	+0.1
1,395,941	-		MIT1002_01267	0.19	+0.2
1,396,176	-		MIT1002_01267	0.34	-0.8
1,396,178	+		MIT1002_01267	0.34	+0.7
1,396,181	-		MIT1002_01267	0.34	-0.2
1,396,181	-		MIT1002_01267	0.34	-0.8
1,396,195	+		MIT1002_01267	0.35	+0.1
1,396,222	+		MIT1002_01267	0.36	-1.7