Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01219

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,340,782	-				-2.4
1,340,910	-		MIT1002_01217	0.16	-2.1
1,340,931	-		MIT1002_01217	0.18	-1.7
1,340,972	-		MIT1002_01217	0.23	-0.3
1,340,996	+		MIT1002_01217	0.25	+0.7
1,341,034	+		MIT1002_01217	0.29	-1.3
1,341,093	-		MIT1002_01217	0.35	-1.8
1,341,156	+		MIT1002_01217	0.42	+0.1
1,341,189	+		MIT1002_01217	0.46	-0.3
1,341,396	-		MIT1002_01217	0.68	-1.1
1,341,399	+		MIT1002_01217	0.68	-0.5
1,341,407	-		MIT1002_01217	0.69	+0.8
1,341,459	+		MIT1002_01217	0.74	-1.6
1,341,519	-		MIT1002_01217	0.81	-1.2
1,341,524	+		MIT1002_01217	0.81	-1.5
1,341,529	+		MIT1002_01217	0.82	-1.7
1,341,613	-				-0.6
1,341,624	-				-0.8
1,341,662	-				-0.0
1,341,763	-		MIT1002_01218	0.48	-0.4
1,341,789	+				+0.4
1,341,833	-				+0.3
1,341,886	-		MIT1002_01219	0.14	+1.6
1,341,888	-		MIT1002_01219	0.14	+0.5
1,341,923	+		MIT1002_01219	0.19	-0.1
1,341,932	-		MIT1002_01219	0.20	-3.9
1,341,955	+		MIT1002_01219	0.23	+0.4
1,341,963	-		MIT1002_01219	0.24	+0.4
1,341,979	-		MIT1002_01219	0.27	-0.2
1,342,074	-		MIT1002_01219	0.39	+0.2
1,342,222	+		MIT1002_01219	0.59	+1.4
1,342,277	+		MIT1002_01219	0.66	+1.4
1,342,300	+		MIT1002_01219	0.69	+0.9
1,342,308	-		MIT1002_01219	0.70	+0.1
1,342,332	-		MIT1002_01219	0.73	+0.4
1,342,498	-				-1.6
1,342,603	+		MIT1002_01220	0.13	+0.7
1,342,617	+		MIT1002_01220	0.15	-2.6
1,342,617	+		MIT1002_01220	0.15	+0.7
1,342,643	+		MIT1002_01220	0.20	-1.5
1,342,656	-		MIT1002_01220	0.22	+0.5
1,342,728	+		MIT1002_01220	0.35	+1.3
1,342,728	+		MIT1002_01220	0.35	+0.8
1,342,757	-		MIT1002_01220	0.40	-0.0
1,342,857	+		MIT1002_01220	0.57	+0.3
1,342,876	+		MIT1002_01220	0.61	+0.8
1,342,890	+		MIT1002_01220	0.63	+0.4
1,342,911	+		MIT1002_01220	0.67	+0.8
1,342,921	+		MIT1002_01220	0.69	-0.1
1,342,921	+		MIT1002_01220	0.69	+2.1
1,342,939	-		MIT1002_01220	0.72	+1.8
1,342,939	-		MIT1002_01220	0.72	+2.2
1,342,993	+		MIT1002_01220	0.81	+1.5
1,343,203	-				+1.2
1,343,226	-				+1.2
1,343,234	-				-0.8
1,343,296	-				-0.2
1,343,298	+				-1.0
1,343,342	-				+0.4
1,343,365	+				+1.6
1,343,367	+				-0.7
1,343,370	-				-0.1
1,343,370	-				+0.3