Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01192

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,305,119	+		MIT1002_01191	0.56	+1.8
1,305,124	-		MIT1002_01191	0.57	+0.6
1,305,129	+		MIT1002_01191	0.57	+0.6
1,305,129	+		MIT1002_01191	0.57	-0.1
1,305,137	-		MIT1002_01191	0.58	+0.0
1,305,137	-		MIT1002_01191	0.58	+0.7
1,305,142	-		MIT1002_01191	0.58	+1.0
1,305,275	-		MIT1002_01191	0.67	+0.7
1,305,358	-		MIT1002_01191	0.72	+0.7
1,305,481	+		MIT1002_01191	0.81	+0.5
1,305,481	+		MIT1002_01191	0.81	-0.8
1,305,489	-		MIT1002_01191	0.81	+0.4
1,305,489	-		MIT1002_01191	0.81	+1.0
1,305,508	+		MIT1002_01191	0.83	-0.9
1,305,508	+		MIT1002_01191	0.83	+0.6
1,305,516	-		MIT1002_01191	0.83	+0.0
1,305,559	-		MIT1002_01191	0.86	+0.7
1,305,613	-		MIT1002_01191	0.90	-2.9
1,305,613	-		MIT1002_01191	0.90	-0.5
1,305,626	-				+0.2
1,305,626	-				+0.1
1,305,644	-				+0.8
1,305,660	+				-0.7
1,305,660	+				+1.0
1,305,660	+				-1.0
1,305,665	+				+2.3
1,305,665	+				+1.2
1,305,665	+				+0.8
1,305,668	-				+0.4
1,305,668	-				-0.3
1,305,673	-				+1.3
1,305,673	-				-0.9
1,305,675	+				+1.7
1,305,689	+				-1.2
1,305,772	+				+2.4
1,305,772	+				-0.9
1,305,836	+				-0.4
1,305,945	+				+0.5
1,305,950	-				-0.0
1,305,953	-				+1.3
1,306,108	+				+0.1
1,306,108	+				-1.1
1,306,218	+				-3.2
1,306,412	+		MIT1002_01192	0.19	-1.7
1,306,466	+		MIT1002_01192	0.22	-1.6
1,306,481	+		MIT1002_01192	0.23	-1.8
1,306,639	+		MIT1002_01192	0.33	-1.1
1,306,704	+		MIT1002_01192	0.37	-1.7
1,306,714	+		MIT1002_01192	0.38	-0.2
1,306,714	+		MIT1002_01192	0.38	-1.7
1,306,738	+		MIT1002_01192	0.39	-2.2
1,307,187	+		MIT1002_01192	0.67	-2.2
1,307,188	+		MIT1002_01192	0.68	-1.6
1,307,239	+		MIT1002_01192	0.71	-1.7
1,307,441	+		MIT1002_01192	0.83	-3.4
1,307,514	+		MIT1002_01192	0.88	+1.0
1,307,531	+		MIT1002_01192	0.89	-3.3