Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01119

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,228,048	+		MIT1002_01118	0.59	+0.2
1,228,056	+		MIT1002_01118	0.59	-0.2
1,228,056	+		MIT1002_01118	0.59	+0.7
1,228,056	+		MIT1002_01118	0.59	+0.7
1,228,056	+		MIT1002_01118	0.59	+0.6
1,228,056	+		MIT1002_01118	0.59	-0.6
1,228,056	+		MIT1002_01118	0.59	-0.2
1,228,056	+		MIT1002_01118	0.59	-0.2
1,228,056	+		MIT1002_01118	0.59	-1.5
1,228,064	-		MIT1002_01118	0.60	+1.4
1,228,099	+		MIT1002_01118	0.62	-0.0
1,228,146	-		MIT1002_01118	0.64	+0.3
1,228,160	-		MIT1002_01118	0.65	+0.2
1,228,202	+		MIT1002_01118	0.67	+0.6
1,228,212	+		MIT1002_01118	0.67	-2.4
1,228,212	+		MIT1002_01118	0.67	-0.3
1,228,220	-		MIT1002_01118	0.68	+1.7
1,228,220	-		MIT1002_01118	0.68	-0.0
1,228,220	-		MIT1002_01118	0.68	-0.9
1,228,251	+		MIT1002_01118	0.69	+0.4
1,228,327	+		MIT1002_01118	0.73	-0.4
1,228,371	+		MIT1002_01118	0.75	-0.0
1,228,396	-		MIT1002_01118	0.76	+0.0
1,228,436	-		MIT1002_01118	0.78	+0.7
1,228,450	+		MIT1002_01118	0.79	+0.9
1,228,488	-		MIT1002_01118	0.81	-2.1
1,228,559	+		MIT1002_01118	0.84	-2.3
1,228,559	+		MIT1002_01118	0.84	+0.1
1,228,562	-		MIT1002_01118	0.84	-1.9
1,228,567	-		MIT1002_01118	0.85	-1.4
1,228,567	-		MIT1002_01118	0.85	+0.0
1,228,569	+		MIT1002_01118	0.85	-1.9
1,228,577	+		MIT1002_01118	0.85	+0.2
1,228,585	-		MIT1002_01118	0.86	-0.0
1,228,585	-		MIT1002_01118	0.86	+0.9
1,228,591	+		MIT1002_01118	0.86	-0.2
1,228,599	-		MIT1002_01118	0.86	-0.7
1,228,662	+		MIT1002_01118	0.89	+0.9
1,228,662	+		MIT1002_01118	0.89	-0.7
1,228,662	+		MIT1002_01118	0.89	-0.0
1,228,670	-		MIT1002_01118	0.90	-2.0
1,228,670	-		MIT1002_01118	0.90	+0.0
1,228,670	-		MIT1002_01118	0.90	-1.9
1,228,670	-		MIT1002_01118	0.90	-0.3
1,228,709	-				-0.5
1,228,798	-				-1.2
1,228,821	+				-0.4
1,228,829	-				+0.4
1,228,829	-				+0.0
1,228,829	-				+0.3
1,228,829	-				-2.4
1,229,018	-				+0.1
1,229,018	-				+0.6
1,229,064	-				-7.3
1,229,226	-		MIT1002_01119	0.24	+0.4
1,229,255	-		MIT1002_01119	0.27	-2.4
1,229,268	-		MIT1002_01119	0.29	-1.1
1,229,325	-		MIT1002_01119	0.35	-4.4
1,229,326	-		MIT1002_01119	0.35	-1.4
1,229,342	-		MIT1002_01119	0.37	-0.5
1,229,343	-		MIT1002_01119	0.37	-2.1
1,229,375	+		MIT1002_01119	0.41	-2.9
1,229,377	-		MIT1002_01119	0.41	-2.3
1,229,418	-		MIT1002_01119	0.46	-4.5
1,229,420	+		MIT1002_01119	0.46	-1.5
1,229,459	-		MIT1002_01119	0.50	-4.4
1,229,491	+		MIT1002_01119	0.54	-0.5
1,229,526	+		MIT1002_01119	0.58	-4.2
1,229,578	-		MIT1002_01119	0.64	-3.6
1,229,623	+		MIT1002_01119	0.69	-4.3
1,229,667	+		MIT1002_01119	0.74	-1.4
1,229,685	-		MIT1002_01119	0.76	-3.5
1,229,698	+		MIT1002_01119	0.77	-3.4
1,229,698	+		MIT1002_01119	0.77	-3.4
1,229,698	+		MIT1002_01119	0.77	-1.4
1,229,698	+		MIT1002_01119	0.77	-2.6
1,229,706	-		MIT1002_01119	0.78	-1.4
1,229,706	-		MIT1002_01119	0.78	-1.0
1,229,706	-		MIT1002_01119	0.78	-2.2
1,229,706	-		MIT1002_01119	0.78	-3.4
1,229,707	+		MIT1002_01119	0.78	-4.1
1,229,707	+		MIT1002_01119	0.78	-1.2
1,229,707	+		MIT1002_01119	0.78	-0.2
1,229,707	+		MIT1002_01119	0.78	-2.8
1,229,733	+		MIT1002_01119	0.81	-2.5
1,229,782	+		MIT1002_01119	0.87	-1.8
1,229,797	+		MIT1002_01119	0.89	-3.0
1,229,797	+		MIT1002_01119	0.89	-3.7
1,229,805	-		MIT1002_01119	0.89	-5.0
1,229,805	-		MIT1002_01119	0.89	-3.4
1,229,805	-		MIT1002_01119	0.89	-3.1
1,229,805	-		MIT1002_01119	0.89	-1.7
1,229,934	+				-0.7
1,229,939	+				-1.3
1,229,939	+				-2.4
1,229,941	-				+0.2
1,229,942	-				-1.6
1,229,944	+				-4.8
1,229,949	+				-1.4
1,229,952	-				-1.4
1,230,037	+		MIT1002_01120	0.12	+1.1
1,230,052	+		MIT1002_01120	0.14	-2.0
1,230,104	+		MIT1002_01120	0.19	-1.0
1,230,104	+		MIT1002_01120	0.19	+0.3
1,230,117	-		MIT1002_01120	0.21	+1.0
1,230,150	+		MIT1002_01120	0.24	+2.6
1,230,150	-		MIT1002_01120	0.24	+1.1
1,230,157	+		MIT1002_01120	0.25	-0.0
1,230,158	-		MIT1002_01120	0.25	+0.7
1,230,158	-		MIT1002_01120	0.25	+0.4
1,230,158	-		MIT1002_01120	0.25	-1.4
1,230,165	-		MIT1002_01120	0.26	+0.5
1,230,222	+		MIT1002_01120	0.32	-2.4
1,230,224	-		MIT1002_01120	0.32	-1.0
1,230,278	-		MIT1002_01120	0.37	-0.4
1,230,285	+		MIT1002_01120	0.38	-2.3
1,230,285	+		MIT1002_01120	0.38	-0.7
1,230,325	-		MIT1002_01120	0.42	-0.2
1,230,439	-		MIT1002_01120	0.54	-2.3
1,230,530	-		MIT1002_01120	0.63	-2.1
1,230,544	-		MIT1002_01120	0.65	-1.0
1,230,593	+		MIT1002_01120	0.70	-1.1
1,230,635	+		MIT1002_01120	0.74	-2.8
1,230,643	-		MIT1002_01120	0.75	-0.0
1,230,669	+		MIT1002_01120	0.78	-1.2
1,230,683	-		MIT1002_01120	0.79	-1.1
1,230,725	+		MIT1002_01120	0.83	-0.9
1,230,733	-		MIT1002_01120	0.84	-1.2
1,230,751	+		MIT1002_01120	0.86	-1.5
1,230,756	+		MIT1002_01120	0.87	-2.6
1,230,759	-		MIT1002_01120	0.87	+0.6
1,230,759	-		MIT1002_01120	0.87	+0.8
1,230,759	-		MIT1002_01120	0.87	-2.6
1,230,759	-		MIT1002_01120	0.87	+1.7
1,230,765	+		MIT1002_01120	0.88	-0.6
1,230,765	+		MIT1002_01120	0.88	+0.6
1,230,773	-		MIT1002_01120	0.88	-1.1
1,230,773	-		MIT1002_01120	0.88	-0.8
1,230,773	-		MIT1002_01120	0.88	-1.2
1,230,773	-		MIT1002_01120	0.88	-0.4
1,230,773	-		MIT1002_01120	0.88	-0.6
1,230,778	-		MIT1002_01120	0.89	+0.3