Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01048

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,156,065	+		MIT1002_01046	0.63	-1.2
1,156,135	+		MIT1002_01046	0.72	+0.4
1,156,145	-		MIT1002_01046	0.74	-1.2
1,156,153	+		MIT1002_01046	0.75	+0.1
1,156,171	-		MIT1002_01046	0.77	-0.4
1,156,211	+		MIT1002_01046	0.83	-3.3
1,156,219	-		MIT1002_01046	0.84	+0.7
1,156,272	+				+0.3
1,156,338	-				+1.2
1,156,561	+		MIT1002_01047	0.31	+0.8
1,156,569	-		MIT1002_01047	0.33	+0.4
1,156,604	+		MIT1002_01047	0.38	-1.0
1,156,612	-		MIT1002_01047	0.39	+2.6
1,156,628	+		MIT1002_01047	0.41	+0.6
1,156,636	-		MIT1002_01047	0.42	+0.9
1,156,650	-		MIT1002_01047	0.44	-0.0
1,156,761	-		MIT1002_01047	0.61	+0.7
1,156,767	+		MIT1002_01047	0.62	-0.5
1,156,767	+		MIT1002_01047	0.62	+0.3
1,156,775	-		MIT1002_01047	0.63	-0.5
1,156,779	-		MIT1002_01047	0.63	-0.6
1,156,794	-		MIT1002_01047	0.66	-0.0
1,156,799	-		MIT1002_01047	0.66	+0.4
1,156,799	-		MIT1002_01047	0.66	+0.0
1,156,897	-		MIT1002_01047	0.81	-1.6
1,156,897	-		MIT1002_01047	0.81	-0.6
1,156,915	+		MIT1002_01047	0.83	+0.8
1,156,915	+		MIT1002_01047	0.83	+0.3
1,156,977	-				+0.7
1,157,096	-				+1.6
1,157,178	+		MIT1002_01048	0.12	+0.0
1,157,179	+		MIT1002_01048	0.12	-0.9
1,157,187	-		MIT1002_01048	0.12	-0.3
1,157,242	-		MIT1002_01048	0.17	-1.7
1,157,269	-		MIT1002_01048	0.20	+0.5
1,157,418	-		MIT1002_01048	0.33	+0.3
1,157,450	-		MIT1002_01048	0.36	+0.3
1,157,458	-		MIT1002_01048	0.37	-1.2
1,157,463	-		MIT1002_01048	0.37	-1.8
1,157,473	-		MIT1002_01048	0.38	-0.4
1,157,478	-		MIT1002_01048	0.38	-0.3
1,157,566	-		MIT1002_01048	0.46	-2.7
1,157,568	-		MIT1002_01048	0.47	+0.2
1,157,600	+		MIT1002_01048	0.49	-1.6
1,157,614	-		MIT1002_01048	0.51	-0.5
1,157,616	+		MIT1002_01048	0.51	+0.5
1,157,712	+		MIT1002_01048	0.59	-1.8
1,157,724	+		MIT1002_01048	0.61	+3.3
1,157,728	+		MIT1002_01048	0.61	+1.5
1,157,827	+		MIT1002_01048	0.70	-1.0
1,157,827	+		MIT1002_01048	0.70	+0.4
1,157,903	+		MIT1002_01048	0.77	+0.8
1,157,911	+		MIT1002_01048	0.77	-0.5
1,157,962	+		MIT1002_01048	0.82	-0.6
1,157,970	-		MIT1002_01048	0.83	+0.3
1,158,000	+		MIT1002_01048	0.85	+0.8
1,158,048	+		MIT1002_01048	0.90	-0.4
1,158,056	-				+0.3
1,158,076	-				+0.6
1,158,080	+				-0.5
1,158,088	-				-0.7
1,158,115	+				-0.3
1,158,180	+				-1.4
1,158,225	-				+1.0
1,158,273	+				+0.5
1,158,304	+				+0.8
1,158,469	+		MIT1002_01049	0.26	-1.0
1,158,469	+		MIT1002_01049	0.26	+0.5
1,158,512	-		MIT1002_01049	0.30	-0.2
1,158,548	-		MIT1002_01049	0.34	-1.0
1,158,564	-		MIT1002_01049	0.36	-0.7
1,158,575	+		MIT1002_01049	0.37	+1.2
1,158,575	+		MIT1002_01049	0.37	+2.0
1,158,583	-		MIT1002_01049	0.38	+1.6
1,158,618	+		MIT1002_01049	0.42	-1.0
1,158,620	+		MIT1002_01049	0.42	-0.8
1,158,620	+		MIT1002_01049	0.42	+2.6
1,158,623	-		MIT1002_01049	0.42	+3.3
1,158,649	-		MIT1002_01049	0.45	-2.5
1,158,649	-		MIT1002_01049	0.45	+0.1
1,158,651	-		MIT1002_01049	0.45	+1.3
1,158,708	+		MIT1002_01049	0.51	+1.0
1,158,714	-		MIT1002_01049	0.52	-0.7
1,158,727	+		MIT1002_01049	0.53	-1.1
1,158,781	-		MIT1002_01049	0.59	-1.1
1,158,801	+		MIT1002_01049	0.61	+2.3
1,158,925	-		MIT1002_01049	0.74	-0.1
1,158,998	-		MIT1002_01049	0.82	-1.7
1,159,005	-		MIT1002_01049	0.82	-2.4
1,159,006	-		MIT1002_01049	0.82	-0.8
1,159,007	+		MIT1002_01049	0.83	-1.2
1,159,023	-		MIT1002_01049	0.84	+1.0
1,159,026	+		MIT1002_01049	0.85	-0.8
1,159,069	+		MIT1002_01049	0.89	-0.5
1,159,110	+				-2.6
1,159,134	+				+0.6
1,159,134	+				-1.4
1,159,136	+				-1.5
1,159,142	-				-0.1
1,159,159	+				+0.2