Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01035

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,145,616	+		MIT1002_01033	0.30	+0.3
1,145,624	-		MIT1002_01033	0.31	+0.2
1,145,707	+		MIT1002_01033	0.48	-0.3
1,145,764	-		MIT1002_01033	0.60	-1.6
1,145,772	+		MIT1002_01033	0.62	-0.2
1,145,780	-		MIT1002_01033	0.63	-1.9
1,145,780	-		MIT1002_01033	0.63	-0.0
1,145,780	-		MIT1002_01033	0.63	-0.3
1,145,797	+		MIT1002_01033	0.67	-0.0
1,145,800	+		MIT1002_01033	0.67	-3.3
1,145,808	-		MIT1002_01033	0.69	+1.2
1,145,810	-		MIT1002_01033	0.70	-0.4
1,145,910	-				-0.7
1,146,001	+				-1.1
1,146,052	+				+0.2
1,146,053	+				-0.8
1,146,062	+				-0.3
1,146,083	-				-2.7
1,146,083	-				+1.5
1,146,199	+		MIT1002_01034	0.22	+1.2
1,146,237	-		MIT1002_01034	0.31	+0.8
1,146,319	+		MIT1002_01034	0.50	-0.7
1,146,319	+		MIT1002_01034	0.50	-3.3
1,146,327	-		MIT1002_01034	0.52	+0.0
1,146,369	+		MIT1002_01034	0.62	+1.1
1,146,369	+		MIT1002_01034	0.62	-2.3
1,146,434	-		MIT1002_01034	0.77	+1.4
1,146,468	-		MIT1002_01034	0.84	+1.4
1,146,544	+				+0.7
1,146,627	+		MIT1002_01035	0.16	-2.5
1,146,627	+		MIT1002_01035	0.16	-2.4
1,146,665	+		MIT1002_01035	0.28	-3.6
1,146,722	+		MIT1002_01035	0.45	+1.0
1,146,728	-		MIT1002_01035	0.47	-2.7
1,146,782	-		MIT1002_01035	0.63	-2.9
1,146,798	+		MIT1002_01035	0.68	-3.5
1,146,817	+		MIT1002_01035	0.74	-1.9
1,146,912	-				-2.9
1,146,947	-				-0.7
1,147,004	+				+1.3
1,147,020	-				+2.3
1,147,026	+				-0.4
1,147,034	-				+0.9
1,147,043	+				+0.2
1,147,080	+		MIT1002_01036	0.10	-1.1
1,147,113	-		MIT1002_01036	0.15	+0.4
1,147,187	+		MIT1002_01036	0.25	+0.3
1,147,189	+		MIT1002_01036	0.25	-0.0
1,147,197	-		MIT1002_01036	0.27	+2.4
1,147,206	+		MIT1002_01036	0.28	+1.1
1,147,212	-		MIT1002_01036	0.29	+0.4
1,147,289	-		MIT1002_01036	0.39	+0.3
1,147,301	+		MIT1002_01036	0.41	+0.1
1,147,456	+		MIT1002_01036	0.62	-0.3
1,147,499	-		MIT1002_01036	0.68	+1.0
1,147,558	-		MIT1002_01036	0.77	-1.0
1,147,622	-		MIT1002_01036	0.86	-0.9
1,147,749	-				+0.7
1,147,757	-				-0.5
1,147,761	+				+0.8
1,147,767	-				+0.0
1,147,825	-				+0.7
1,147,864	+				+0.5
1,147,871	+				-0.2
1,147,872	-				-0.9