Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01031

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,142,603	+		MIT1002_01029	0.31	+0.2
1,142,622	+		MIT1002_01029	0.34	-1.5
1,142,692	+		MIT1002_01029	0.46	-1.1
1,142,692	+		MIT1002_01029	0.46	-1.2
1,142,700	-		MIT1002_01029	0.47	-0.9
1,142,700	-		MIT1002_01029	0.47	-0.5
1,142,700	-		MIT1002_01029	0.47	+0.2
1,142,731	-		MIT1002_01029	0.52	+0.0
1,142,743	-		MIT1002_01029	0.54	-2.5
1,142,768	+		MIT1002_01029	0.59	+1.2
1,142,785	+		MIT1002_01029	0.62	+0.7
1,142,818	+		MIT1002_01029	0.67	+0.2
1,142,818	+		MIT1002_01029	0.67	-1.3
1,142,818	+		MIT1002_01029	0.67	+0.7
1,142,826	+		MIT1002_01029	0.69	-0.3
1,142,826	-		MIT1002_01029	0.69	-0.5
1,142,826	-		MIT1002_01029	0.69	+1.2
1,142,826	-		MIT1002_01029	0.69	-1.7
1,142,908	+		MIT1002_01029	0.82	+0.7
1,143,009	+				-2.0
1,143,046	-				+0.2
1,143,066	+				+0.0
1,143,074	-				-1.5
1,143,074	-				+1.3
1,143,074	-				-0.2
1,143,076	+				-0.5
1,143,082	-				+2.5
1,143,082	-				+0.2
1,143,097	-				+0.0
1,143,097	-				-0.3
1,143,201	+		MIT1002_01030	0.23	-2.2
1,143,207	-		MIT1002_01030	0.28	-1.7
1,143,209	-		MIT1002_01030	0.29	-0.2
1,143,327	-				+0.0
1,143,465	-		MIT1002_01031	0.47	+1.0
1,143,466	-		MIT1002_01031	0.48	+1.8
1,143,466	-		MIT1002_01031	0.48	+1.0
1,143,471	-		MIT1002_01031	0.55	+1.0
1,143,475	+		MIT1002_01031	0.60	+1.7
1,143,483	-		MIT1002_01031	0.71	+1.6
1,143,502	+				+1.6
1,143,575	-				-0.8
1,143,625	-				-0.1
1,143,735	+				-2.7
1,143,942	-				-1.2
1,144,062	-				+0.5
1,144,105	+				+0.9
1,144,282	-		MIT1002_01032	0.25	+2.0
1,144,407	-		MIT1002_01032	0.35	-1.3
1,144,430	-		MIT1002_01032	0.37	+2.9