Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01027

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,136,991	+		MIT1002_01026	0.43	-0.0
1,136,999	-		MIT1002_01026	0.44	+0.0
1,137,025	-		MIT1002_01026	0.46	+1.3
1,137,036	+		MIT1002_01026	0.46	+0.9
1,137,074	+		MIT1002_01026	0.49	-0.9
1,137,082	-		MIT1002_01026	0.50	-0.9
1,137,126	+		MIT1002_01026	0.53	-0.2
1,137,152	-		MIT1002_01026	0.55	-0.6
1,137,168	+		MIT1002_01026	0.56	+0.2
1,137,177	-		MIT1002_01026	0.56	+0.8
1,137,357	+		MIT1002_01026	0.69	+0.0
1,137,422	-		MIT1002_01026	0.74	+0.1
1,137,522	+		MIT1002_01026	0.81	+0.2
1,137,522	+		MIT1002_01026	0.81	+1.3
1,137,565	-		MIT1002_01026	0.84	-2.0
1,137,648	+		MIT1002_01026	0.90	+0.8
1,137,658	-				+0.7
1,137,711	+				+0.0
1,137,718	+				+1.7
1,137,786	+				-1.9
1,137,786	+				-0.6
1,137,799	-				-1.0
1,137,862	-				-1.9
1,137,864	-				-1.5
1,137,879	-				+0.0
1,137,921	-				-2.2
1,137,975	-				-2.5
1,137,999	-				-2.3
1,138,141	-				+0.7
1,138,161	+				-1.6
1,138,198	-				-5.0
1,138,226	-				-1.1
1,138,233	-				-2.1
1,138,281	+				-1.6
1,138,370	+		MIT1002_01027	0.10	-0.7
1,138,380	+		MIT1002_01027	0.11	-3.1
1,138,444	+		MIT1002_01027	0.12	-3.7
1,138,452	-		MIT1002_01027	0.12	-0.6
1,138,541	-		MIT1002_01027	0.15	-2.9
1,138,603	+		MIT1002_01027	0.16	+0.0
1,138,603	+		MIT1002_01027	0.16	-2.2
1,138,638	+		MIT1002_01027	0.17	-4.3
1,138,904	-		MIT1002_01027	0.24	-2.1
1,138,939	+		MIT1002_01027	0.25	-4.1
1,138,974	-		MIT1002_01027	0.26	-5.4
1,139,031	+		MIT1002_01027	0.27	-4.2
1,139,032	-		MIT1002_01027	0.27	-1.8
1,139,039	-		MIT1002_01027	0.28	-5.1
1,139,070	+		MIT1002_01027	0.28	-1.8
1,139,078	+		MIT1002_01027	0.29	-6.3
1,139,088	+		MIT1002_01027	0.29	-5.0
1,139,096	-		MIT1002_01027	0.29	-4.1
1,139,096	-		MIT1002_01027	0.29	-1.1
1,139,115	+		MIT1002_01027	0.30	-4.3
1,139,118	-		MIT1002_01027	0.30	-2.5
1,139,137	+		MIT1002_01027	0.30	-3.0
1,139,148	+		MIT1002_01027	0.30	+0.7
1,139,159	+		MIT1002_01027	0.31	-3.0
1,139,167	+		MIT1002_01027	0.31	-3.8
1,139,167	+		MIT1002_01027	0.31	-1.6
1,139,175	-		MIT1002_01027	0.31	-4.2
1,139,175	-		MIT1002_01027	0.31	-0.2
1,139,175	-		MIT1002_01027	0.31	-3.7
1,139,263	+		MIT1002_01027	0.33	-3.6
1,139,271	-		MIT1002_01027	0.34	-2.5
1,139,295	-		MIT1002_01027	0.34	-4.0
1,139,317	+		MIT1002_01027	0.35	-2.1
1,139,355	+		MIT1002_01027	0.36	-2.9
1,139,363	-		MIT1002_01027	0.36	-0.9
1,139,376	-		MIT1002_01027	0.36	-3.1
1,139,389	-		MIT1002_01027	0.37	-2.9
1,139,415	-		MIT1002_01027	0.37	-2.8
1,139,439	+		MIT1002_01027	0.38	-0.9
1,139,440	+		MIT1002_01027	0.38	-3.3
1,139,444	+		MIT1002_01027	0.38	-0.2
1,139,447	-		MIT1002_01027	0.38	-1.8
1,139,510	+		MIT1002_01027	0.40	-1.8
1,139,610	-		MIT1002_01027	0.42	-4.0
1,139,619	+		MIT1002_01027	0.43	-1.4
1,139,712	+		MIT1002_01027	0.45	-3.4
1,139,715	-		MIT1002_01027	0.45	-5.9
1,139,786	-		MIT1002_01027	0.47	-3.4
1,139,838	+		MIT1002_01027	0.48	-2.3
1,139,867	-		MIT1002_01027	0.49	-4.3
1,139,951	-		MIT1002_01027	0.51	-4.3
1,139,977	+		MIT1002_01027	0.52	-0.6
1,140,062	+		MIT1002_01027	0.54	-4.3
1,140,070	-		MIT1002_01027	0.54	-4.0
1,140,070	-		MIT1002_01027	0.54	-4.0
1,140,128	-		MIT1002_01027	0.56	-3.8
1,140,163	+		MIT1002_01027	0.57	-5.4
1,140,207	+		MIT1002_01027	0.58	-3.6
1,140,233	+		MIT1002_01027	0.58	-5.3
1,140,241	-		MIT1002_01027	0.59	-2.7
1,140,241	-		MIT1002_01027	0.59	-2.9
1,140,241	-		MIT1002_01027	0.59	-4.3
1,140,254	+		MIT1002_01027	0.59	-3.4
1,140,262	-		MIT1002_01027	0.59	-3.5
1,140,264	+		MIT1002_01027	0.59	-2.5
1,140,265	+		MIT1002_01027	0.59	-4.3
1,140,277	+		MIT1002_01027	0.59	-2.2
1,140,288	+		MIT1002_01027	0.60	-0.8
1,140,296	-		MIT1002_01027	0.60	-4.3
1,140,365	+		MIT1002_01027	0.62	-3.1
1,140,427	-		MIT1002_01027	0.63	-0.7
1,140,471	+		MIT1002_01027	0.64	-3.4
1,140,479	+		MIT1002_01027	0.65	-0.2
1,140,506	+		MIT1002_01027	0.65	+0.2
1,140,506	+		MIT1002_01027	0.65	-1.3
1,140,507	+		MIT1002_01027	0.65	-1.7
1,140,507	+		MIT1002_01027	0.65	-1.6
1,140,508	+		MIT1002_01027	0.65	-2.3
1,140,511	+		MIT1002_01027	0.65	-0.8
1,140,511	+		MIT1002_01027	0.65	-4.5
1,140,514	-		MIT1002_01027	0.66	-3.0
1,140,514	-		MIT1002_01027	0.66	-2.5
1,140,514	-		MIT1002_01027	0.66	-4.1
1,140,516	-		MIT1002_01027	0.66	-2.5
1,140,537	-		MIT1002_01027	0.66	-4.7
1,140,572	-		MIT1002_01027	0.67	-1.2
1,140,600	+		MIT1002_01027	0.68	-4.3
1,140,608	-		MIT1002_01027	0.68	-0.9
1,140,608	-		MIT1002_01027	0.68	-1.9
1,140,615	+		MIT1002_01027	0.68	-4.1
1,140,618	-		MIT1002_01027	0.68	-1.1
1,140,632	-		MIT1002_01027	0.69	-3.1
1,140,633	-		MIT1002_01027	0.69	-1.2
1,140,633	-		MIT1002_01027	0.69	-4.6
1,140,639	-		MIT1002_01027	0.69	+1.0
1,140,649	-		MIT1002_01027	0.69	-0.3
1,140,649	-		MIT1002_01027	0.69	-0.9
1,140,689	-		MIT1002_01027	0.70	-4.7
1,140,704	-		MIT1002_01027	0.70	-1.7
1,140,711	-		MIT1002_01027	0.71	-3.0
1,140,785	+		MIT1002_01027	0.73	-2.2
1,140,790	+		MIT1002_01027	0.73	-4.9
1,140,795	+		MIT1002_01027	0.73	+0.7
1,140,798	-		MIT1002_01027	0.73	-2.4
1,140,803	-		MIT1002_01027	0.73	-1.2
1,140,853	-		MIT1002_01027	0.74	-1.1
1,140,981	-		MIT1002_01027	0.78	+0.7
1,141,017	+		MIT1002_01027	0.78	-1.0
1,141,042	-		MIT1002_01027	0.79	-3.2
1,141,146	+		MIT1002_01027	0.82	-3.8
1,141,146	+		MIT1002_01027	0.82	-3.0
1,141,154	-		MIT1002_01027	0.82	-2.4
1,141,154	-		MIT1002_01027	0.82	-4.7
1,141,163	+		MIT1002_01027	0.82	-2.7
1,141,179	+		MIT1002_01027	0.83	-2.3
1,141,194	+		MIT1002_01027	0.83	-2.8
1,141,213	+		MIT1002_01027	0.84	-5.1
1,141,213	+		MIT1002_01027	0.84	-0.6
1,141,213	+		MIT1002_01027	0.84	-0.9
1,141,221	-		MIT1002_01027	0.84	+1.0
1,141,221	-		MIT1002_01027	0.84	-4.8
1,141,221	-		MIT1002_01027	0.84	-1.5
1,141,273	-		MIT1002_01027	0.85	-1.1
1,141,278	+		MIT1002_01027	0.85	-2.8
1,141,278	+		MIT1002_01027	0.85	-2.0
1,141,278	+		MIT1002_01027	0.85	-5.8
1,141,278	+		MIT1002_01027	0.85	-2.5
1,141,278	+		MIT1002_01027	0.85	-3.3
1,141,278	+		MIT1002_01027	0.85	-4.5
1,141,278	+		MIT1002_01027	0.85	-1.1
1,141,286	-		MIT1002_01027	0.85	-3.9
1,141,286	-		MIT1002_01027	0.85	-1.1
1,141,286	-		MIT1002_01027	0.85	-0.3
1,141,286	-		MIT1002_01027	0.85	-4.3
1,141,286	-		MIT1002_01027	0.85	-3.2
1,141,286	-		MIT1002_01027	0.85	-2.2
1,141,299	+		MIT1002_01027	0.86	-5.6
1,141,304	+		MIT1002_01027	0.86	-2.9
1,141,346	+		MIT1002_01027	0.87	-4.7
1,141,358	+		MIT1002_01027	0.87	-6.4
1,141,363	+		MIT1002_01027	0.87	-5.2
1,141,363	+		MIT1002_01027	0.87	-4.0
1,141,363	+		MIT1002_01027	0.87	-1.9
1,141,371	-		MIT1002_01027	0.88	-1.2
1,141,371	-		MIT1002_01027	0.88	-3.6
1,141,427	+		MIT1002_01027	0.89	-5.0
1,141,435	-		MIT1002_01027	0.89	+0.4
1,141,492	-				-3.8
1,141,499	+				+0.2
1,141,499	+				+0.0
1,141,499	+				-2.8
1,141,499	+				-5.3
1,141,507	-				-1.4
1,141,507	-				-4.6
1,141,553	+				-3.2
1,141,561	+				-0.8
1,141,561	+				-4.3
1,141,569	-				-4.0
1,141,569	-				-5.5
1,141,569	-				-2.8
1,141,598	+				-0.9
1,141,606	-				-4.2
1,141,606	-				-1.6
1,141,616	+				-3.3
1,141,625	+				-0.7
1,141,643	-				-3.2
1,141,699	-				-3.4
1,141,709	-				-3.7
1,141,709	-				-1.5
1,141,709	-				-2.1
1,141,709	-				-5.6
1,141,714	-				-4.4
1,141,739	+				-4.2
1,141,753	-				-2.2
1,141,757	+				-2.8
1,141,757	+				-0.2
1,141,757	+				-5.0
1,141,765	-				-1.7
1,141,765	-				-1.8
1,141,765	-				-0.6
1,141,791	-				-4.6
1,141,996	-				-0.9
1,142,004	-				-3.0
1,142,058	+				-2.0
1,142,066	-				-3.4
1,142,131	+		MIT1002_01028	0.23	-2.5
1,142,131	-		MIT1002_01028	0.23	-1.7
1,142,161	+		MIT1002_01028	0.32	+1.0
1,142,167	-		MIT1002_01028	0.34	-0.4
1,142,203	-		MIT1002_01028	0.45	-1.9
1,142,246	-		MIT1002_01028	0.58	-1.0
1,142,354	+				-0.5
1,142,354	+				+0.3
1,142,376	-				+0.3
1,142,603	+		MIT1002_01029	0.31	+0.2
1,142,622	+		MIT1002_01029	0.34	-1.5
1,142,692	+		MIT1002_01029	0.46	-1.1
1,142,692	+		MIT1002_01029	0.46	-1.2
1,142,700	-		MIT1002_01029	0.47	-0.9
1,142,700	-		MIT1002_01029	0.47	-0.5
1,142,700	-		MIT1002_01029	0.47	+0.2
1,142,731	-		MIT1002_01029	0.52	+0.0
1,142,743	-		MIT1002_01029	0.54	-2.5
1,142,768	+		MIT1002_01029	0.59	+1.2
1,142,785	+		MIT1002_01029	0.62	+0.7
1,142,818	+		MIT1002_01029	0.67	+0.2
1,142,818	+		MIT1002_01029	0.67	-1.3
1,142,818	+		MIT1002_01029	0.67	+0.7
1,142,826	+		MIT1002_01029	0.69	-0.3
1,142,826	-		MIT1002_01029	0.69	-0.5
1,142,826	-		MIT1002_01029	0.69	+1.2
1,142,826	-		MIT1002_01029	0.69	-1.7