Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00947

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,048,263	-				+0.3
1,048,344	+				+0.3
1,048,363	-				-0.7
1,048,406	+				-1.5
1,048,505	+				+1.0
1,048,514	-				+0.6
1,048,528	+				+0.7
1,048,546	+				+0.2
1,048,549	+				-2.0
1,048,557	-				-1.2
1,048,585	+				-0.8
1,048,646	+				-4.6
1,048,654	-				-0.7
1,048,667	+		MIT1002_00946	0.12	-1.6
1,048,683	-		MIT1002_00946	0.14	-2.5
1,048,683	-		MIT1002_00946	0.14	-1.3
1,048,729	-		MIT1002_00946	0.22	-6.5
1,048,794	-		MIT1002_00946	0.33	-4.7
1,048,850	+		MIT1002_00946	0.42	-4.7
1,048,995	+		MIT1002_00946	0.66	-0.6
1,048,998	-		MIT1002_00946	0.66	-4.3
1,049,002	+		MIT1002_00946	0.67	-2.1
1,049,002	+		MIT1002_00946	0.67	-3.0
1,049,002	+		MIT1002_00946	0.67	+0.4
1,049,010	-		MIT1002_00946	0.68	-3.5
1,049,010	-		MIT1002_00946	0.68	-2.4
1,049,010	-		MIT1002_00946	0.68	-4.4
1,049,010	-		MIT1002_00946	0.68	-0.3
1,049,164	+				-1.1
1,049,172	+				+0.4
1,049,175	-				-0.9
1,049,178	-				-0.2
1,049,264	+				-2.6
1,049,274	+				-3.8
1,049,298	+				-3.6
1,049,341	-				-4.5
1,049,609	+		MIT1002_00947	0.29	-3.2
1,049,653	-		MIT1002_00947	0.32	-1.3
1,049,653	-		MIT1002_00947	0.32	-1.8
1,049,689	+		MIT1002_00947	0.35	-1.5
1,049,706	+		MIT1002_00947	0.36	-3.9
1,049,723	+		MIT1002_00947	0.37	-0.9
1,049,726	-		MIT1002_00947	0.37	-1.5
1,049,729	+		MIT1002_00947	0.37	-7.8
1,049,731	-		MIT1002_00947	0.38	-3.8
1,049,731	-		MIT1002_00947	0.38	-3.3
1,049,740	+		MIT1002_00947	0.38	-1.8
1,049,752	+		MIT1002_00947	0.39	-3.6
1,049,812	-		MIT1002_00947	0.43	-2.1
1,049,847	+		MIT1002_00947	0.46	-1.5
1,049,847	+		MIT1002_00947	0.46	-0.9
1,049,861	-		MIT1002_00947	0.47	+0.7
1,049,874	+		MIT1002_00947	0.48	-3.9
1,049,874	+		MIT1002_00947	0.48	+1.0
1,049,875	+		MIT1002_00947	0.48	+0.2
1,049,884	-		MIT1002_00947	0.48	-2.7
1,049,884	-		MIT1002_00947	0.48	-4.2
1,049,884	-		MIT1002_00947	0.48	-4.3
1,049,956	+		MIT1002_00947	0.54	-3.0
1,049,962	-		MIT1002_00947	0.54	-2.4
1,049,988	+		MIT1002_00947	0.56	-2.4
1,049,988	+		MIT1002_00947	0.56	-2.8
1,050,022	+		MIT1002_00947	0.58	-4.2
1,050,134	-		MIT1002_00947	0.66	-1.1
1,050,155	-		MIT1002_00947	0.68	-3.8
1,050,161	+		MIT1002_00947	0.68	-1.5
1,050,161	+		MIT1002_00947	0.68	-2.2
1,050,163	+		MIT1002_00947	0.68	-5.2
1,050,169	-		MIT1002_00947	0.69	-2.2
1,050,179	-		MIT1002_00947	0.70	-1.3
1,050,217	+		MIT1002_00947	0.72	-4.2
1,050,217	+		MIT1002_00947	0.72	-1.9
1,050,217	+		MIT1002_00947	0.72	-0.3
1,050,222	-		MIT1002_00947	0.73	-0.6
1,050,225	-		MIT1002_00947	0.73	-2.8
1,050,227	-		MIT1002_00947	0.73	-3.8
1,050,240	+		MIT1002_00947	0.74	-1.9
1,050,299	-		MIT1002_00947	0.78	-0.8
1,050,388	-		MIT1002_00947	0.84	-3.6
1,050,458	+		MIT1002_00947	0.89	-4.6
1,050,537	-				-0.8
1,050,541	-				-2.6
1,050,594	+				-3.0
1,050,627	+				-2.9
1,050,664	-				-1.8
1,050,730	-		MIT1002_00948	0.10	-5.6
1,050,781	+		MIT1002_00948	0.15	-0.8
1,050,791	+		MIT1002_00948	0.16	-2.9
1,050,837	-		MIT1002_00948	0.20	-3.5
1,050,837	-		MIT1002_00948	0.20	-0.6
1,050,881	+		MIT1002_00948	0.24	-2.3
1,050,881	+		MIT1002_00948	0.24	-1.3
1,050,889	-		MIT1002_00948	0.25	-2.0
1,050,974	+		MIT1002_00948	0.33	-7.0
1,050,974	+		MIT1002_00948	0.33	-3.2
1,050,986	+		MIT1002_00948	0.34	-3.9
1,050,991	+		MIT1002_00948	0.34	-1.2
1,050,999	-		MIT1002_00948	0.35	-3.7
1,051,001	+		MIT1002_00948	0.35	-4.2
1,051,004	-		MIT1002_00948	0.35	-1.8
1,051,017	+		MIT1002_00948	0.37	-2.6
1,051,039	+		MIT1002_00948	0.39	-0.9
1,051,039	+		MIT1002_00948	0.39	-3.4
1,051,055	+		MIT1002_00948	0.40	-0.2
1,051,129	+		MIT1002_00948	0.47	-2.2
1,051,161	+		MIT1002_00948	0.50	-1.2
1,051,161	+		MIT1002_00948	0.50	-7.6
1,051,171	+		MIT1002_00948	0.51	-3.9
1,051,179	-		MIT1002_00948	0.51	-7.5
1,051,239	+		MIT1002_00948	0.57	-2.4
1,051,380	-		MIT1002_00948	0.70	-3.5
1,051,404	-		MIT1002_00948	0.72	-0.7
1,051,404	-		MIT1002_00948	0.72	-3.9
1,051,406	+		MIT1002_00948	0.72	-4.2
1,051,425	+		MIT1002_00948	0.74	-0.0
1,051,449	-		MIT1002_00948	0.76	-3.5
1,051,450	-		MIT1002_00948	0.76	-0.6
1,051,478	-		MIT1002_00948	0.79	-3.2
1,051,483	-		MIT1002_00948	0.79	-5.5
1,051,492	-		MIT1002_00948	0.80	-2.2
1,051,522	+		MIT1002_00948	0.83	-2.8
1,051,524	+		MIT1002_00948	0.83	-1.0
1,051,542	+		MIT1002_00948	0.84	-0.6
1,051,598	+		MIT1002_00948	0.90	-3.7