Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00946

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,047,699	+		MIT1002_00945	0.54	+2.5
1,047,712	+		MIT1002_00945	0.55	+0.1
1,047,758	+		MIT1002_00945	0.59	+1.8
1,047,758	+		MIT1002_00945	0.59	-1.3
1,047,763	+		MIT1002_00945	0.59	-0.8
1,047,763	+		MIT1002_00945	0.59	-2.4
1,047,766	-		MIT1002_00945	0.60	+1.4
1,047,766	-		MIT1002_00945	0.60	-1.8
1,047,790	-		MIT1002_00945	0.62	+3.1
1,047,794	+		MIT1002_00945	0.62	+0.2
1,047,797	-		MIT1002_00945	0.62	+1.0
1,047,797	-		MIT1002_00945	0.62	-0.0
1,047,802	-		MIT1002_00945	0.63	-1.1
1,047,802	-		MIT1002_00945	0.63	-1.9
1,047,822	+		MIT1002_00945	0.64	-1.3
1,047,880	+		MIT1002_00945	0.69	+1.0
1,047,964	-		MIT1002_00945	0.76	+0.5
1,047,965	-		MIT1002_00945	0.76	-0.7
1,047,972	-		MIT1002_00945	0.77	+0.2
1,047,985	+		MIT1002_00945	0.78	-1.1
1,047,999	+		MIT1002_00945	0.79	-1.3
1,048,019	-		MIT1002_00945	0.81	+0.3
1,048,080	-		MIT1002_00945	0.86	-1.7
1,048,125	-		MIT1002_00945	0.90	-0.0
1,048,263	-				+0.3
1,048,344	+				+0.3
1,048,363	-				-0.7
1,048,406	+				-1.5
1,048,505	+				+1.0
1,048,514	-				+0.6
1,048,528	+				+0.7
1,048,546	+				+0.2
1,048,549	+				-2.0
1,048,557	-				-1.2
1,048,585	+				-0.8
1,048,646	+				-4.6
1,048,654	-				-0.7
1,048,667	+		MIT1002_00946	0.12	-1.6
1,048,683	-		MIT1002_00946	0.14	-2.5
1,048,683	-		MIT1002_00946	0.14	-1.3
1,048,729	-		MIT1002_00946	0.22	-6.5
1,048,794	-		MIT1002_00946	0.33	-4.7
1,048,850	+		MIT1002_00946	0.42	-4.7
1,048,995	+		MIT1002_00946	0.66	-0.6
1,048,998	-		MIT1002_00946	0.66	-4.3
1,049,002	+		MIT1002_00946	0.67	-2.1
1,049,002	+		MIT1002_00946	0.67	-3.0
1,049,002	+		MIT1002_00946	0.67	+0.4
1,049,010	-		MIT1002_00946	0.68	-3.5
1,049,010	-		MIT1002_00946	0.68	-2.4
1,049,010	-		MIT1002_00946	0.68	-4.4
1,049,010	-		MIT1002_00946	0.68	-0.3
1,049,164	+				-1.1
1,049,172	+				+0.4
1,049,175	-				-0.9
1,049,178	-				-0.2
1,049,264	+				-2.6
1,049,274	+				-3.8
1,049,298	+				-3.6
1,049,341	-				-4.5
1,049,609	+		MIT1002_00947	0.29	-3.2
1,049,653	-		MIT1002_00947	0.32	-1.3
1,049,653	-		MIT1002_00947	0.32	-1.8
1,049,689	+		MIT1002_00947	0.35	-1.5
1,049,706	+		MIT1002_00947	0.36	-3.9
1,049,723	+		MIT1002_00947	0.37	-0.9
1,049,726	-		MIT1002_00947	0.37	-1.5
1,049,729	+		MIT1002_00947	0.37	-7.8
1,049,731	-		MIT1002_00947	0.38	-3.8
1,049,731	-		MIT1002_00947	0.38	-3.3
1,049,740	+		MIT1002_00947	0.38	-1.8
1,049,752	+		MIT1002_00947	0.39	-3.6
1,049,812	-		MIT1002_00947	0.43	-2.1
1,049,847	+		MIT1002_00947	0.46	-1.5
1,049,847	+		MIT1002_00947	0.46	-0.9
1,049,861	-		MIT1002_00947	0.47	+0.7
1,049,874	+		MIT1002_00947	0.48	-3.9
1,049,874	+		MIT1002_00947	0.48	+1.0
1,049,875	+		MIT1002_00947	0.48	+0.2
1,049,884	-		MIT1002_00947	0.48	-2.7
1,049,884	-		MIT1002_00947	0.48	-4.2
1,049,884	-		MIT1002_00947	0.48	-4.3
1,049,956	+		MIT1002_00947	0.54	-3.0
1,049,962	-		MIT1002_00947	0.54	-2.4
1,049,988	+		MIT1002_00947	0.56	-2.4
1,049,988	+		MIT1002_00947	0.56	-2.8
1,050,022	+		MIT1002_00947	0.58	-4.2
1,050,134	-		MIT1002_00947	0.66	-1.1
1,050,155	-		MIT1002_00947	0.68	-3.8
1,050,161	+		MIT1002_00947	0.68	-1.5
1,050,161	+		MIT1002_00947	0.68	-2.2
1,050,163	+		MIT1002_00947	0.68	-5.2
1,050,169	-		MIT1002_00947	0.69	-2.2
1,050,179	-		MIT1002_00947	0.70	-1.3