Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00933

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,032,757	+		MIT1002_00931	0.39	-1.1
1,032,757	+		MIT1002_00931	0.39	+0.9
1,032,757	+		MIT1002_00931	0.39	+1.1
1,032,757	+		MIT1002_00931	0.39	+1.4
1,032,757	+		MIT1002_00931	0.39	-0.4
1,032,765	-		MIT1002_00931	0.40	-1.8
1,032,837	+		MIT1002_00931	0.50	-0.3
1,032,848	+		MIT1002_00931	0.51	-1.0
1,032,848	+		MIT1002_00931	0.51	-1.6
1,032,909	-		MIT1002_00931	0.59	-0.8
1,032,959	+		MIT1002_00931	0.66	-2.8
1,032,968	+		MIT1002_00931	0.67	-0.2
1,032,976	-		MIT1002_00931	0.68	-0.0
1,032,976	-		MIT1002_00931	0.68	+1.2
1,032,984	+		MIT1002_00931	0.69	-0.3
1,032,986	+		MIT1002_00931	0.69	-2.0
1,033,013	+		MIT1002_00931	0.73	+0.5
1,033,026	-		MIT1002_00931	0.74	-1.1
1,033,026	-		MIT1002_00931	0.74	-0.9
1,033,046	+		MIT1002_00931	0.77	+1.4
1,033,054	+		MIT1002_00931	0.78	-1.2
1,033,060	-		MIT1002_00931	0.79	+0.6
1,033,087	+		MIT1002_00931	0.82	-0.9
1,033,087	-		MIT1002_00931	0.82	+1.0
1,033,100	-		MIT1002_00931	0.84	-2.4
1,033,276	+				+1.4
1,033,284	-				-0.1
1,033,291	+				+0.1
1,033,299	-				-0.0
1,033,332	-				+0.2
1,033,400	-		MIT1002_00932	0.10	-2.4
1,033,511	+		MIT1002_00932	0.38	-1.2
1,033,629	+		MIT1002_00932	0.67	-2.4
1,033,723	+				-0.1
1,033,723	+				+0.5
1,033,731	-				+0.9
1,033,793	+				-2.0
1,033,793	+				-1.4
1,033,827	+				-1.9
1,033,908	-		MIT1002_00933	0.21	-0.9
1,033,929	+		MIT1002_00933	0.24	-4.4
1,033,984	+		MIT1002_00933	0.32	-1.6
1,034,185	+		MIT1002_00933	0.60	-2.2
1,034,208	-		MIT1002_00933	0.63	-2.7
1,034,208	-		MIT1002_00933	0.63	-3.6
1,034,254	-		MIT1002_00933	0.70	-0.3
1,034,269	-		MIT1002_00933	0.72	-1.3
1,034,309	+		MIT1002_00933	0.78	-3.2
1,034,316	+		MIT1002_00933	0.79	-1.0
1,034,316	+		MIT1002_00933	0.79	-2.4
1,034,334	-		MIT1002_00933	0.81	-1.5
1,034,353	+		MIT1002_00933	0.84	-2.2
1,034,353	+		MIT1002_00933	0.84	-0.9
1,034,397	+				-0.1
1,034,397	+				-2.4
1,034,397	+				-0.5
1,034,397	+				-2.4
1,034,397	+				-2.7
1,034,397	+				-0.4
1,034,397	+				-1.3
1,034,397	+				+0.4
1,034,404	-				-2.3
1,034,405	-				+0.9
1,034,405	-				-0.5
1,034,405	-				-1.2
1,034,405	-				-3.1
1,034,497	-				+0.6
1,034,507	+				+0.8
1,034,507	+				-0.9
1,034,517	+				+0.5
1,034,525	-				+1.0
1,034,715	-				+0.6
1,034,719	+				-0.1
1,034,897	+				+2.9
1,034,905	-				-1.9
1,034,905	-				-0.1
1,035,024	+		MIT1002_00934	0.19	-1.1
1,035,123	-		MIT1002_00934	0.29	-0.6
1,035,275	+		MIT1002_00934	0.44	-0.3
1,035,300	-		MIT1002_00934	0.47	-0.6
1,035,309	+		MIT1002_00934	0.48	-1.9
1,035,326	-		MIT1002_00934	0.49	-2.6
1,035,387	-		MIT1002_00934	0.56	-0.2
1,035,397	-		MIT1002_00934	0.57	+0.4
1,035,443	-		MIT1002_00934	0.61	-2.6
1,035,443	-		MIT1002_00934	0.61	-1.8
1,035,455	-		MIT1002_00934	0.62	-0.5