Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00926

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,027,584	+		MIT1002_00925	0.68	+0.1
1,027,620	+		MIT1002_00925	0.69	+0.4
1,027,628	-		MIT1002_00925	0.70	+0.2
1,027,639	+		MIT1002_00925	0.70	-1.2
1,027,693	-		MIT1002_00925	0.72	+0.5
1,027,721	+		MIT1002_00925	0.73	-0.6
1,027,749	+		MIT1002_00925	0.74	-0.5
1,027,785	-		MIT1002_00925	0.75	-1.7
1,027,798	+		MIT1002_00925	0.76	+0.8
1,027,903	-		MIT1002_00925	0.80	+0.4
1,027,916	+		MIT1002_00925	0.80	-1.1
1,027,944	+		MIT1002_00925	0.81	-3.1
1,027,978	-		MIT1002_00925	0.82	-1.2
1,027,978	-		MIT1002_00925	0.82	-2.1
1,027,993	-		MIT1002_00925	0.83	+1.0
1,028,002	+		MIT1002_00925	0.83	-0.4
1,028,010	-		MIT1002_00925	0.84	+1.2
1,028,128	+		MIT1002_00925	0.88	-2.4
1,028,136	-		MIT1002_00925	0.88	+1.0
1,028,146	-		MIT1002_00925	0.89	+0.5
1,028,306	-				-0.2
1,028,347	+				+0.7
1,028,381	+				+0.0
1,028,389	-				+2.9
1,028,389	-				+0.6
1,028,391	+				-2.5
1,028,399	-				+0.4
1,028,406	-				-1.7
1,028,434	+				+0.2
1,028,434	+				-0.8
1,028,566	+				+0.4
1,028,568	+				+0.2
1,028,578	+				-0.8
1,028,601	+				-0.2
1,028,606	-				+2.2
1,028,612	+				-1.0
1,028,622	+				-0.5
1,028,713	-		MIT1002_00926	0.21	+0.7
1,028,713	-		MIT1002_00926	0.21	-0.0
1,028,741	+		MIT1002_00926	0.24	+1.9
1,028,756	+		MIT1002_00926	0.26	-0.9
1,028,756	+		MIT1002_00926	0.26	-0.4
1,028,764	-		MIT1002_00926	0.27	-2.2
1,028,764	-		MIT1002_00926	0.27	-1.7
1,028,790	+		MIT1002_00926	0.30	+0.5
1,028,825	+		MIT1002_00926	0.35	-0.7
1,028,869	-		MIT1002_00926	0.40	-1.9
1,028,887	+		MIT1002_00926	0.42	-1.5
1,028,927	-		MIT1002_00926	0.47	+1.7
1,028,943	+		MIT1002_00926	0.49	+0.2
1,028,944	+		MIT1002_00926	0.49	-0.7
1,028,947	-		MIT1002_00926	0.50	+0.4
1,029,047	+		MIT1002_00926	0.62	-0.6
1,029,057	+		MIT1002_00926	0.63	-0.6
1,029,070	+		MIT1002_00926	0.65	-0.8
1,029,094	+		MIT1002_00926	0.68	+0.4
1,029,094	+		MIT1002_00926	0.68	+0.4
1,029,094	+		MIT1002_00926	0.68	-0.7
1,029,102	-		MIT1002_00926	0.69	+1.0
1,029,102	-		MIT1002_00926	0.69	+0.6
1,029,102	-		MIT1002_00926	0.69	-1.2
1,029,181	-		MIT1002_00926	0.79	+2.5
1,029,203	-		MIT1002_00926	0.81	-1.3
1,029,203	-		MIT1002_00926	0.81	+0.5
1,029,234	-		MIT1002_00926	0.85	+1.0
1,029,262	+		MIT1002_00926	0.89	+0.8
1,029,392	-				-0.2
1,029,392	-				+1.5
1,029,436	-				+1.2
1,029,436	-				-2.0
1,029,451	+				-0.6
1,029,574	-		MIT1002_00927	0.20	-1.3
1,029,681	+		MIT1002_00927	0.30	-0.3
1,029,878	-		MIT1002_00927	0.47	+0.4
1,029,934	+		MIT1002_00927	0.52	+0.6
1,029,942	-		MIT1002_00927	0.53	+1.7
1,029,952	-		MIT1002_00927	0.54	+1.5
1,030,015	-		MIT1002_00927	0.59	-0.3
1,030,065	+		MIT1002_00927	0.64	+1.0
1,030,065	+		MIT1002_00927	0.64	+0.4
1,030,073	-		MIT1002_00927	0.64	+0.5
1,030,073	-		MIT1002_00927	0.64	+1.0
1,030,073	-		MIT1002_00927	0.64	-0.2
1,030,073	-		MIT1002_00927	0.64	-1.7
1,030,092	-		MIT1002_00927	0.66	-0.0
1,030,113	+		MIT1002_00927	0.68	-1.9
1,030,121	-		MIT1002_00927	0.69	-0.2
1,030,129	+		MIT1002_00927	0.69	+0.4
1,030,129	+		MIT1002_00927	0.69	-0.7
1,030,129	+		MIT1002_00927	0.69	+0.4
1,030,129	+		MIT1002_00927	0.69	+1.0
1,030,137	-		MIT1002_00927	0.70	-0.3
1,030,137	-		MIT1002_00927	0.70	+0.2
1,030,139	+		MIT1002_00927	0.70	-1.5
1,030,139	+		MIT1002_00927	0.70	-0.0
1,030,214	-		MIT1002_00927	0.77	+1.6
1,030,244	-		MIT1002_00927	0.79	-1.5
1,030,246	+		MIT1002_00927	0.80	+0.6
1,030,254	-		MIT1002_00927	0.80	+1.8
1,030,254	-		MIT1002_00927	0.80	+0.6
1,030,254	-		MIT1002_00927	0.80	-1.4
1,030,342	+		MIT1002_00927	0.88	-1.7
1,030,343	+		MIT1002_00927	0.88	+0.1
1,030,343	+		MIT1002_00927	0.88	+2.1
1,030,343	+		MIT1002_00927	0.88	+0.8
1,030,343	+		MIT1002_00927	0.88	-0.0
1,030,350	-		MIT1002_00927	0.89	-0.0