Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00923

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 6
1,023,179	-		MIT1002_00921	0.62	-1.2
1,023,314	+		MIT1002_00921	0.74	+0.8
1,023,324	+		MIT1002_00921	0.75	-2.2
1,023,367	+		MIT1002_00921	0.79	+1.9
1,023,375	+		MIT1002_00921	0.80	-0.6
1,023,389	+		MIT1002_00921	0.81	+0.2
1,023,395	+		MIT1002_00921	0.81	+1.1
1,023,403	-		MIT1002_00921	0.82	-1.6
1,023,408	-		MIT1002_00921	0.83	+0.2
1,023,416	+		MIT1002_00921	0.83	+1.2
1,023,424	-		MIT1002_00921	0.84	-0.5
1,023,483	+		MIT1002_00921	0.89	-0.2
1,023,483	+		MIT1002_00921	0.89	+0.1
1,023,491	-				-1.8
1,023,491	-				-0.6
1,023,491	-				+0.1
1,023,491	-				-0.2
1,023,491	-				-0.9
1,023,491	-				-0.8
1,023,522	-				-0.8
1,023,564	+				-0.5
1,023,653	-				-0.0
1,023,689	-				-0.8
1,023,689	-				+0.3
1,023,726	-				-0.0
1,023,726	-				+1.0
1,023,726	-				+0.9
1,023,726	-				-0.2
1,023,755	+				+0.1
1,023,800	-				-0.5
1,023,883	-				+1.0
1,023,917	+				-1.3
1,023,988	+				-0.6
1,023,993	+				+1.1
1,023,996	-				+0.6
1,024,001	-				+0.2
1,024,001	-				+0.5
1,024,001	-				-2.2
1,024,005	+				-1.2
1,024,037	-				-0.8
1,024,108	+		MIT1002_00922	0.35	-0.7
1,024,116	+		MIT1002_00922	0.41	+1.6
1,024,116	+		MIT1002_00922	0.41	-0.4
1,024,162	+		MIT1002_00922	0.74	+1.0
1,024,192	-				-0.6
1,024,197	-				-0.9
1,024,197	-				-0.5
1,024,202	-				+1.2
1,024,211	+				-0.2
1,024,219	-				+2.1
1,024,250	+				+1.0
1,024,364	+		MIT1002_00923	0.16	-2.2
1,024,372	+		MIT1002_00923	0.17	+0.7
1,024,499	+		MIT1002_00923	0.28	-2.4
1,024,573	-		MIT1002_00923	0.34	-1.3
1,024,577	+		MIT1002_00923	0.34	-1.9
1,024,609	+		MIT1002_00923	0.37	+0.4
1,024,609	+		MIT1002_00923	0.37	+1.0
1,024,617	-		MIT1002_00923	0.38	+1.7
1,024,617	-		MIT1002_00923	0.38	-0.7
1,024,792	-		MIT1002_00923	0.52	-1.0
1,024,829	-		MIT1002_00923	0.55	+0.8
1,024,873	-		MIT1002_00923	0.59	-3.9
1,024,875	-		MIT1002_00923	0.59	-2.2
1,025,033	-		MIT1002_00923	0.73	+1.1
1,025,072	+		MIT1002_00923	0.76	-0.4
1,025,078	+		MIT1002_00923	0.76	-0.5
1,025,084	+		MIT1002_00923	0.77	-0.4
1,025,100	+		MIT1002_00923	0.78	+2.0
1,025,237	-		MIT1002_00923	0.90	-1.2
1,025,240	-				+0.0
1,025,285	+				+0.1
1,025,349	-				+0.2
1,025,352	-				+0.1
1,025,365	+				+0.3
1,025,385	+				+0.2
1,025,398	-				-1.5
1,025,406	+				-0.1
1,025,420	-				+1.4
1,025,725	+				-1.2
1,025,775	+				+0.3
1,025,776	-				-1.2
1,025,786	+				+1.9
1,025,794	-				+0.5
1,025,816	+				-2.5
1,025,824	-				-0.6
1,025,863	-				-0.4
1,025,881	+				+1.5
1,025,974	+				-0.4
1,025,983	-				-0.7
1,026,172	+		MIT1002_00925	0.17	-1.9
1,026,190	-		MIT1002_00925	0.18	+2.6
1,026,191	-		MIT1002_00925	0.18	+1.0
1,026,198	-		MIT1002_00925	0.18	-0.8
1,026,205	-		MIT1002_00925	0.18	-1.6
1,026,219	-		MIT1002_00925	0.19	-0.5
1,026,273	-		MIT1002_00925	0.21	-0.7
1,026,339	-		MIT1002_00925	0.23	-0.4
1,026,351	-		MIT1002_00925	0.23	-2.1