Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04007

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
4,492,693	-		MIT1002_04006	0.23	-1.0
4,492,746	+		MIT1002_04006	0.29	-0.4
4,492,751	+		MIT1002_04006	0.29	+0.5
4,492,848	-		MIT1002_04006	0.39	-1.5
4,492,853	-		MIT1002_04006	0.40	-0.5
4,492,894	+		MIT1002_04006	0.44	+0.2
4,492,948	-		MIT1002_04006	0.49	+0.4
4,492,956	-		MIT1002_04006	0.50	+1.5
4,493,015	-		MIT1002_04006	0.56	-0.3
4,493,066	+		MIT1002_04006	0.62	+0.2
4,493,087	+		MIT1002_04006	0.64	+1.0
4,493,170	-		MIT1002_04006	0.72	+0.6
4,493,179	+		MIT1002_04006	0.73	+0.4
4,493,179	+		MIT1002_04006	0.73	-1.1
4,493,187	-		MIT1002_04006	0.74	+0.8
4,493,189	+		MIT1002_04006	0.74	+0.6
4,493,212	-		MIT1002_04006	0.76	+2.7
4,493,234	-		MIT1002_04006	0.79	+0.0
4,493,240	+		MIT1002_04006	0.79	+0.2
4,493,242	+		MIT1002_04006	0.80	+1.0
4,493,376	+				+0.1
4,493,376	+				+0.4
4,493,376	+				+0.0
4,493,382	-				-0.4
4,493,384	-				+0.3
4,493,389	-				-1.2
4,493,418	+				-3.4
4,493,426	-				-1.4
4,493,436	-				-0.8
4,493,436	-				+0.9
4,493,488	+				+0.4
4,493,490	-				+0.7
4,493,494	-				+0.6
4,493,496	-				+0.7
4,493,520	-				-1.1
4,493,521	+				-1.7
4,493,523	+				+0.1
4,493,523	+				+0.1
4,493,529	-				+0.7
4,493,533	+				-1.2
4,493,533	+				+0.9
4,493,533	+				+0.1
4,493,533	+				-1.0
4,493,533	+				-0.8
4,493,533	+				+0.7
4,493,541	-				+1.1
4,493,541	-				-0.1
4,493,548	+				+1.1
4,493,557	-				-0.1
4,493,561	-				-0.2
4,493,625	-				-1.4
4,493,639	-				+2.6
4,493,661	+				-0.1
4,493,814	+		MIT1002_04007	0.28	-1.9
4,493,859	+		MIT1002_04007	0.34	+0.4
4,493,880	-		MIT1002_04007	0.36	+1.3
4,494,089	-		MIT1002_04007	0.63	+0.3
4,494,107	+		MIT1002_04007	0.65	-1.7
4,494,135	+		MIT1002_04007	0.69	-1.9
4,494,140	+		MIT1002_04007	0.69	-1.3
4,494,140	+		MIT1002_04007	0.69	-2.2
4,494,140	+		MIT1002_04007	0.69	+0.2
4,494,140	+		MIT1002_04007	0.69	-0.1
4,494,207	+		MIT1002_04007	0.78	-1.2
4,494,346	+				-0.3
4,494,354	-				+1.0
4,494,360	-				-3.0
4,494,382	-				+1.4