Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03896

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
4,363,197	+		MIT1002_03895	0.32	+0.4
4,363,249	-		MIT1002_03895	0.38	-0.4
4,363,284	-		MIT1002_03895	0.41	+1.7
4,363,310	+		MIT1002_03895	0.44	+2.1
4,363,336	+		MIT1002_03895	0.47	+0.0
4,363,338	+		MIT1002_03895	0.47	-0.6
4,363,338	+		MIT1002_03895	0.47	-0.3
4,363,338	+		MIT1002_03895	0.47	-2.0
4,363,338	+		MIT1002_03895	0.47	-2.6
4,363,346	-		MIT1002_03895	0.48	-0.9
4,363,346	-		MIT1002_03895	0.48	-1.3
4,363,348	+		MIT1002_03895	0.48	-1.5
4,363,348	+		MIT1002_03895	0.48	-0.1
4,363,348	+		MIT1002_03895	0.48	+0.6
4,363,348	+		MIT1002_03895	0.48	+0.7
4,363,348	+		MIT1002_03895	0.48	+0.2
4,363,348	+		MIT1002_03895	0.48	+0.6
4,363,348	+		MIT1002_03895	0.48	-0.2
4,363,348	+		MIT1002_03895	0.48	-0.9
4,363,348	+		MIT1002_03895	0.48	+1.0
4,363,348	+		MIT1002_03895	0.48	-1.9
4,363,354	-		MIT1002_03895	0.48	+0.4
4,363,354	-		MIT1002_03895	0.48	+1.0
4,363,356	-		MIT1002_03895	0.49	-0.8
4,363,356	-		MIT1002_03895	0.49	-2.0
4,363,356	-		MIT1002_03895	0.49	+0.1
4,363,356	-		MIT1002_03895	0.49	-0.9
4,363,356	-		MIT1002_03895	0.49	-0.7
4,363,356	-		MIT1002_03895	0.49	+0.0
4,363,356	-		MIT1002_03895	0.49	+0.0
4,363,356	-		MIT1002_03895	0.49	+0.2
4,363,356	-		MIT1002_03895	0.49	-0.1
4,363,356	-		MIT1002_03895	0.49	+1.7
4,363,369	+		MIT1002_03895	0.50	-1.7
4,363,375	+		MIT1002_03895	0.50	-0.1
4,363,438	-		MIT1002_03895	0.57	+1.3
4,363,438	-		MIT1002_03895	0.57	-0.2
4,363,438	-		MIT1002_03895	0.57	-0.1
4,363,441	+		MIT1002_03895	0.57	+1.9
4,363,441	+		MIT1002_03895	0.57	+2.0
4,363,482	-		MIT1002_03895	0.61	-0.2
4,363,552	-		MIT1002_03895	0.68	-1.1
4,363,552	-		MIT1002_03895	0.68	+1.2
4,363,583	+		MIT1002_03895	0.72	-0.1
4,363,583	+		MIT1002_03895	0.72	-0.1
4,363,591	-		MIT1002_03895	0.72	+2.1
4,363,591	-		MIT1002_03895	0.72	-1.4
4,363,591	-		MIT1002_03895	0.72	-2.3
4,363,601	-		MIT1002_03895	0.73	+2.1
4,363,601	-		MIT1002_03895	0.73	+1.7
4,363,601	-		MIT1002_03895	0.73	+1.0
4,363,626	+		MIT1002_03895	0.76	-0.3
4,363,634	-		MIT1002_03895	0.77	-0.5
4,363,655	-		MIT1002_03895	0.79	+0.1
4,363,655	-		MIT1002_03895	0.79	+0.1
4,363,685	-		MIT1002_03895	0.82	+0.5
4,363,694	-		MIT1002_03895	0.83	-0.9
4,363,711	+		MIT1002_03895	0.84	-0.8
4,363,715	+		MIT1002_03895	0.85	+0.8
4,363,816	+				+1.1
4,363,862	-				+1.4
4,363,906	+				+0.2
4,363,908	-				-0.1
4,363,908	-				+1.0
4,363,914	-				-0.9
4,363,929	+				+1.9
4,363,942	+				-0.3
4,363,950	-				+0.6
4,364,019	-				+1.4
4,364,019	-				-0.5
4,366,002	-				+0.1
4,366,007	-				+0.7
4,366,012	-				-0.7
4,366,103	-		MIT1002_03897	0.16	+0.6
4,366,196	-		MIT1002_03897	0.27	-0.3
4,366,293	-		MIT1002_03897	0.39	+0.5
4,366,390	-		MIT1002_03897	0.51	+1.1
4,366,390	-		MIT1002_03897	0.51	+2.1
4,366,390	-		MIT1002_03897	0.51	-0.1
4,366,390	-		MIT1002_03897	0.51	-0.1
4,366,508	-		MIT1002_03897	0.66	+1.9
4,366,605	-		MIT1002_03897	0.78	-0.3
4,366,764	-				-2.1
4,366,863	-				-1.8