Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03271

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
3,642,520	+		MIT1002_03270	0.30	-0.1
3,642,524	+		MIT1002_03270	0.31	-0.4
3,642,530	+		MIT1002_03270	0.31	-1.0
3,642,538	-		MIT1002_03270	0.31	+2.0
3,642,565	-		MIT1002_03270	0.33	-1.2
3,642,570	-		MIT1002_03270	0.34	-0.4
3,642,645	+		MIT1002_03270	0.39	-0.1
3,642,664	+		MIT1002_03270	0.40	-0.9
3,642,664	+		MIT1002_03270	0.40	-0.3
3,642,672	-		MIT1002_03270	0.41	-0.8
3,642,672	-		MIT1002_03270	0.41	+0.2
3,642,672	-		MIT1002_03270	0.41	-0.8
3,642,672	-		MIT1002_03270	0.41	-0.8
3,642,788	+		MIT1002_03270	0.49	+1.2
3,642,823	+		MIT1002_03270	0.52	-0.9
3,642,831	-		MIT1002_03270	0.52	+1.2
3,642,831	-		MIT1002_03270	0.52	+0.4
3,642,917	+		MIT1002_03270	0.58	+0.7
3,642,925	-		MIT1002_03270	0.59	+1.0
3,642,927	+		MIT1002_03270	0.59	-0.4
3,642,984	+		MIT1002_03270	0.63	-0.2
3,642,987	+		MIT1002_03270	0.63	+0.2
3,643,086	+		MIT1002_03270	0.70	+0.1
3,643,091	+		MIT1002_03270	0.71	+2.5
3,643,094	-		MIT1002_03270	0.71	-2.2
3,643,094	-		MIT1002_03270	0.71	-1.3
3,643,114	-		MIT1002_03270	0.72	+0.2
3,643,127	+		MIT1002_03270	0.73	+0.4
3,643,145	+		MIT1002_03270	0.74	-2.5
3,643,251	+		MIT1002_03270	0.82	-0.1
3,643,253	+		MIT1002_03270	0.82	-1.0
3,643,269	+		MIT1002_03270	0.83	+0.9
3,643,276	-		MIT1002_03270	0.84	-0.1
3,643,339	+		MIT1002_03270	0.88	+0.4
3,643,361	+		MIT1002_03270	0.90	+1.1
3,643,376	-				-0.0
3,643,421	-				+1.1
3,643,426	+				+1.5
3,643,431	+				+1.1
3,643,441	-				+0.2
3,643,443	+				+1.3
3,643,443	+				-0.1
3,643,451	-				-0.3
3,643,516	+				-2.1
3,643,542	-				-0.1
3,643,552	-				+0.2
3,643,569	+				+2.4
3,643,569	+				+2.9
3,643,577	-				-0.1
3,643,590	+				-1.4
3,643,695	-		MIT1002_03271	0.11	-1.3
3,643,724	+		MIT1002_03271	0.12	-1.3
3,643,869	+		MIT1002_03271	0.21	+0.8
3,643,869	-		MIT1002_03271	0.21	+0.8
3,643,877	-		MIT1002_03271	0.22	+0.3
3,643,885	-		MIT1002_03271	0.22	+0.7
3,643,924	+		MIT1002_03271	0.24	+0.2
3,644,016	+		MIT1002_03271	0.30	-0.5
3,644,039	-		MIT1002_03271	0.31	-0.2
3,644,082	-		MIT1002_03271	0.34	+0.1
3,644,141	-		MIT1002_03271	0.37	+0.3
3,644,187	-		MIT1002_03271	0.40	+1.2
3,644,191	+		MIT1002_03271	0.40	+0.8
3,644,209	+		MIT1002_03271	0.41	-0.1
3,644,282	+		MIT1002_03271	0.46	-0.0
3,644,290	-		MIT1002_03271	0.46	-0.4
3,644,300	-		MIT1002_03271	0.47	-0.0
3,644,311	-		MIT1002_03271	0.48	-0.3
3,644,344	-		MIT1002_03271	0.50	+0.4
3,644,410	+		MIT1002_03271	0.54	+1.6
3,644,487	-		MIT1002_03271	0.58	+0.7
3,644,524	+		MIT1002_03271	0.60	-1.5
3,644,561	-		MIT1002_03271	0.63	+0.1
3,644,575	+		MIT1002_03271	0.63	+0.2
3,644,731	-		MIT1002_03271	0.73	+0.8
3,644,833	-		MIT1002_03271	0.79	+1.3
3,644,864	-		MIT1002_03271	0.81	+2.2
3,644,936	-		MIT1002_03271	0.85	+0.2
3,644,942	-		MIT1002_03271	0.85	+0.3
3,644,962	-		MIT1002_03271	0.87	-0.2
3,644,973	-		MIT1002_03271	0.87	+0.5
3,645,023	+				+0.1
3,645,035	+				-1.5
3,645,096	+				+0.8
3,645,103	-				+0.2
3,645,168	+				+0.5
3,645,176	-				+1.5
3,645,176	-				+0.3
3,645,176	-				+0.4
3,645,282	+				+1.1
3,645,306	+				-0.6
3,645,307	-				+0.8
3,645,313	+				-0.2
3,645,317	-				+0.2
3,645,326	-				-0.7
3,645,353	+				+0.4
3,645,353	+				+0.3
3,645,361	-				-2.4
3,645,361	-				+0.8
3,645,379	-				+0.5
3,645,441	+				+1.3
3,645,472	-				+1.2
3,645,491	+				-1.2
3,645,519	+				-0.1
3,645,556	-				-1.3
3,645,585	+				-0.5
3,645,585	+				-0.8
3,645,586	-				-1.8
3,645,593	+				-0.6
3,645,607	-				-0.1
3,645,632	+				-1.1
3,645,640	-				-1.4
3,645,640	-				+0.2
3,645,640	-				+0.9
3,645,640	-				+0.1
3,645,640	-				+1.3
3,645,684	-				-0.6
3,645,788	-		MIT1002_03272	0.15	-2.3
3,645,823	+		MIT1002_03272	0.17	-1.8
3,645,858	-		MIT1002_03272	0.19	-0.7
3,645,867	+		MIT1002_03272	0.20	-1.1
3,645,867	+		MIT1002_03272	0.20	-0.9
3,645,882	-		MIT1002_03272	0.21	+0.6
3,645,888	+		MIT1002_03272	0.21	+0.8
3,645,888	+		MIT1002_03272	0.21	-0.2
3,645,896	-		MIT1002_03272	0.22	+0.5
3,645,898	+		MIT1002_03272	0.22	+0.3
3,645,906	-		MIT1002_03272	0.22	-2.2
3,645,906	-		MIT1002_03272	0.22	-2.6
3,645,945	+		MIT1002_03272	0.24	-0.9
3,645,951	-		MIT1002_03272	0.25	-0.1
3,645,972	+		MIT1002_03272	0.26	-1.6
3,645,980	+		MIT1002_03272	0.26	-2.1
3,646,009	+		MIT1002_03272	0.28	-3.1
3,646,015	-		MIT1002_03272	0.29	-2.6
3,646,024	+		MIT1002_03272	0.29	-0.1
3,646,029	+		MIT1002_03272	0.29	-0.6
3,646,032	-		MIT1002_03272	0.30	+0.0
3,646,060	+		MIT1002_03272	0.31	+0.2
3,646,067	+		MIT1002_03272	0.32	+0.2
3,646,068	-		MIT1002_03272	0.32	-0.5
3,646,136	+		MIT1002_03272	0.36	-1.1
3,646,145	+		MIT1002_03272	0.36	+0.7