Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03258

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
3,629,544	+				+0.3
3,629,617	-				-2.3
3,629,620	+				+3.0
3,629,750	+		MIT1002_03257	0.21	-1.3
3,629,750	+		MIT1002_03257	0.21	+1.0
3,629,750	+		MIT1002_03257	0.21	-2.4
3,629,758	-		MIT1002_03257	0.22	-0.6
3,629,758	-		MIT1002_03257	0.22	+0.7
3,629,782	+		MIT1002_03257	0.26	-0.9
3,629,838	-		MIT1002_03257	0.33	-1.9
3,629,889	-		MIT1002_03257	0.39	-0.1
3,629,893	+		MIT1002_03257	0.40	-0.4
3,629,893	+		MIT1002_03257	0.40	-2.6
3,629,981	+		MIT1002_03257	0.51	-0.3
3,629,989	-		MIT1002_03257	0.52	-0.2
3,629,992	+		MIT1002_03257	0.52	-1.0
3,630,125	+		MIT1002_03257	0.69	+0.7
3,630,146	-		MIT1002_03257	0.72	-0.0
3,630,152	+		MIT1002_03257	0.73	-0.5
3,630,160	-		MIT1002_03257	0.74	+0.2
3,630,213	+		MIT1002_03257	0.81	-1.0
3,630,213	+		MIT1002_03257	0.81	+0.2
3,630,247	+		MIT1002_03257	0.85	+0.7
3,630,255	-		MIT1002_03257	0.86	-2.1
3,630,349	+				+0.8
3,630,354	+				+0.7
3,630,354	+				+0.4
3,630,362	-				-1.7
3,630,362	-				-1.2
3,630,403	+				+0.1
3,630,413	-				-0.3
3,630,484	-				+0.7
3,630,542	+				+0.1
3,630,544	+				-1.3
3,630,552	-				+0.7
3,630,558	-				-0.5
3,630,595	+		MIT1002_03258	0.14	-0.3
3,630,595	+		MIT1002_03258	0.14	-1.1
3,630,612	-		MIT1002_03258	0.17	-1.1
3,630,621	-		MIT1002_03258	0.18	-0.7
3,630,781	-		MIT1002_03258	0.42	-1.0
3,630,853	+		MIT1002_03258	0.53	+0.1
3,630,898	+		MIT1002_03258	0.60	+1.0
3,630,906	-		MIT1002_03258	0.61	+0.2
3,630,919	+		MIT1002_03258	0.63	-1.8
3,630,939	+		MIT1002_03258	0.66	-0.8
3,630,939	+		MIT1002_03258	0.66	+0.6
3,630,998	-		MIT1002_03258	0.75	+1.0
3,631,019	+		MIT1002_03258	0.78	-0.1
3,631,045	+		MIT1002_03258	0.82	-0.2
3,631,053	-		MIT1002_03258	0.83	-1.4
3,631,074	-		MIT1002_03258	0.86	-1.6
3,631,160	-				-0.7
3,631,214	-				+0.1
3,631,225	+				-0.4
3,631,248	+				-1.1
3,631,248	+				-0.6
3,631,248	+				-1.4
3,631,297	+				+0.4
3,631,300	-				-2.4
3,631,331	-		MIT1002_03259	0.12	+2.5
3,631,331	-		MIT1002_03259	0.12	-0.1
3,631,331	-		MIT1002_03259	0.12	+0.0
3,631,364	-		MIT1002_03259	0.15	+0.3
3,631,457	+		MIT1002_03259	0.22	-2.5
3,631,467	+		MIT1002_03259	0.22	+0.0
3,631,469	-		MIT1002_03259	0.23	+1.3
3,631,551	+		MIT1002_03259	0.29	-1.8
3,631,621	+		MIT1002_03259	0.34	-1.8
3,631,646	-		MIT1002_03259	0.36	-0.0
3,631,682	-		MIT1002_03259	0.39	+0.7
3,631,693	+		MIT1002_03259	0.39	+1.0
3,631,775	-		MIT1002_03259	0.46	-0.4
3,631,782	+		MIT1002_03259	0.46	-0.1
3,631,838	+		MIT1002_03259	0.50	+0.3
3,631,889	+		MIT1002_03259	0.54	-0.2
3,631,968	+		MIT1002_03259	0.60	+0.6
3,632,020	+		MIT1002_03259	0.64	+1.1
3,632,054	+		MIT1002_03259	0.67	-0.5
3,632,061	+		MIT1002_03259	0.67	-0.6
3,632,061	+		MIT1002_03259	0.67	+0.7
3,632,099	+		MIT1002_03259	0.70	-0.2
3,632,099	+		MIT1002_03259	0.70	+2.2
3,632,099	+		MIT1002_03259	0.70	-1.1
3,632,099	+		MIT1002_03259	0.70	-1.2
3,632,107	-		MIT1002_03259	0.71	-3.7
3,632,107	-		MIT1002_03259	0.71	+0.2
3,632,153	+		MIT1002_03259	0.74	+0.2