Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03227

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
3,596,613	-		MIT1002_03226	0.15	-0.5
3,596,881	-		MIT1002_03226	0.40	+0.5
3,597,206	-		MIT1002_03226	0.70	-1.8
3,597,510	-				+0.5
3,597,574	+		MIT1002_03227	0.13	-0.1
3,597,575	-		MIT1002_03227	0.13	-0.3
3,597,685	-		MIT1002_03227	0.34	-0.1
3,597,697	+		MIT1002_03227	0.37	-3.0
3,597,840	+		MIT1002_03227	0.65	+0.4
3,597,848	-		MIT1002_03227	0.66	+2.0
3,597,852	+		MIT1002_03227	0.67	-1.6
3,597,852	+		MIT1002_03227	0.67	-0.7
3,597,860	-		MIT1002_03227	0.68	+0.4
3,597,884	+		MIT1002_03227	0.73	+0.1
3,597,892	-		MIT1002_03227	0.75	-1.9
3,597,921	-		MIT1002_03227	0.80	-0.0
3,597,921	-		MIT1002_03227	0.80	-0.8
3,597,953	+		MIT1002_03227	0.86	-0.6
3,598,012	-				+1.0
3,598,033	+				+0.5
3,598,051	-				-1.9
3,598,075	-				+0.3
3,598,092	-				+0.2
3,598,100	+				-0.8
3,598,103	-				+1.3
3,598,151	-				+0.2
3,598,193	-				-2.8
3,598,209	+				-0.5
3,598,216	+				-2.1
3,598,217	+				+0.2
3,598,222	+		MIT1002_03228	0.10	+3.0
3,598,307	-		MIT1002_03228	0.18	-2.3
3,598,321	-		MIT1002_03228	0.19	-1.8
3,598,344	+		MIT1002_03228	0.22	+2.0
3,598,391	+		MIT1002_03228	0.26	-0.8
3,598,391	+		MIT1002_03228	0.26	+0.0
3,598,391	+		MIT1002_03228	0.26	-0.7
3,598,409	-		MIT1002_03228	0.28	+0.9
3,598,457	-		MIT1002_03228	0.32	+0.0
3,598,500	-		MIT1002_03228	0.37	+0.3
3,598,533	+		MIT1002_03228	0.40	-0.1
3,598,541	-		MIT1002_03228	0.40	-1.7
3,598,541	-		MIT1002_03228	0.40	-0.4
3,598,607	+		MIT1002_03228	0.47	-1.0
3,598,607	+		MIT1002_03228	0.47	+0.2
3,598,722	+		MIT1002_03228	0.58	+1.0
3,598,730	-		MIT1002_03228	0.59	+0.3
3,598,776	-		MIT1002_03228	0.63	+0.3
3,598,864	-		MIT1002_03228	0.71	+0.2
3,598,864	-		MIT1002_03228	0.71	+0.5
3,598,948	-		MIT1002_03228	0.79	-0.7
3,598,955	+		MIT1002_03228	0.80	+2.2
3,599,022	+		MIT1002_03228	0.86	-0.1