Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02989

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
3,324,936	-				+0.1
3,325,002	-				-0.9
3,325,002	-				+1.5
3,325,011	+				+1.4
3,325,023	-				+0.2
3,325,026	+				-1.8
3,325,062	-		MIT1002_02988	0.13	-1.4
3,325,064	+		MIT1002_02988	0.13	-0.4
3,325,072	-		MIT1002_02988	0.14	+0.7
3,325,199	-		MIT1002_02988	0.28	-1.8
3,325,281	-		MIT1002_02988	0.37	-0.6
3,325,398	+		MIT1002_02988	0.50	-0.8
3,325,406	-		MIT1002_02988	0.51	-3.5
3,325,432	-		MIT1002_02988	0.54	-2.0
3,325,454	-		MIT1002_02988	0.57	-0.9
3,325,458	-		MIT1002_02988	0.57	-1.4
3,325,465	+		MIT1002_02988	0.58	-0.8
3,325,570	-		MIT1002_02988	0.70	-1.0
3,325,591	+		MIT1002_02988	0.72	+0.5
3,325,651	+		MIT1002_02988	0.79	-2.1
3,325,659	-		MIT1002_02988	0.79	-0.3
3,325,674	-		MIT1002_02988	0.81	+0.1
3,325,712	-		MIT1002_02988	0.85	+0.7
3,325,758	-				+0.2
3,325,788	+				+2.6
3,325,791	-				-1.5
3,325,796	-				+0.7
3,325,878	-				+0.7
3,326,046	-		MIT1002_02989	0.19	+0.9
3,326,050	+		MIT1002_02989	0.20	-0.7
3,326,082	-		MIT1002_02989	0.23	-0.3
3,326,122	-		MIT1002_02989	0.27	-1.7
3,326,139	-		MIT1002_02989	0.29	-3.2
3,326,180	-		MIT1002_02989	0.33	-0.6
3,326,180	-		MIT1002_02989	0.33	-0.5
3,326,182	+		MIT1002_02989	0.34	-1.8
3,326,455	+		MIT1002_02989	0.63	-2.0
3,326,530	+		MIT1002_02989	0.71	-3.2
3,326,538	-		MIT1002_02989	0.71	+0.0
3,326,613	+		MIT1002_02989	0.79	-0.3
3,326,626	-		MIT1002_02989	0.81	-1.0
3,326,682	+		MIT1002_02989	0.87	+2.0
3,326,706	-		MIT1002_02989	0.89	+1.8
3,326,791	+				+0.2
3,326,810	+				-0.2
3,326,855	+				+1.8
3,326,855	+				-0.5
3,326,923	+				-1.2
3,326,971	+				+2.3
3,326,971	+				+0.1
3,326,978	+				+1.4
3,326,986	-				+3.1
3,326,986	-				-0.5
3,327,011	-				-0.3
3,327,045	+		MIT1002_02990	0.11	-1.2
3,327,070	-		MIT1002_02990	0.12	+0.1
3,327,070	-		MIT1002_02990	0.12	-0.8
3,327,070	-		MIT1002_02990	0.12	-2.0
3,327,187	-		MIT1002_02990	0.19	-1.6
3,327,229	-		MIT1002_02990	0.22	-0.1
3,327,241	-		MIT1002_02990	0.23	-0.3
3,327,259	+		MIT1002_02990	0.24	-3.5
3,327,269	-		MIT1002_02990	0.24	-2.0
3,327,342	+		MIT1002_02990	0.29	-0.4
3,327,436	+		MIT1002_02990	0.35	-1.2
3,327,453	+		MIT1002_02990	0.36	-1.9
3,327,538	-		MIT1002_02990	0.41	-1.6
3,327,548	-		MIT1002_02990	0.41	+0.9