Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02153

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
2,408,628	-				-2.5
2,409,187	-				-0.7
2,409,264	-				+0.3
2,409,308	+				-0.5
2,409,328	+				-1.0
2,409,328	+				-1.9
2,409,336	+				-0.4
2,409,336	-				+1.8
2,409,343	-				-1.6
2,409,394	-				+0.2
2,409,412	+				-1.5
2,409,420	-				+0.3
2,409,491	-		MIT1002_02153	0.11	-1.6
2,409,496	+		MIT1002_02153	0.11	+0.3
2,409,535	+		MIT1002_02153	0.13	+1.1
2,409,540	+		MIT1002_02153	0.14	-2.3
2,409,541	+		MIT1002_02153	0.14	-0.3
2,409,595	+		MIT1002_02153	0.17	+0.3
2,409,595	+		MIT1002_02153	0.17	+2.2
2,409,714	-		MIT1002_02153	0.23	+0.4
2,409,817	-		MIT1002_02153	0.29	-0.7
2,409,822	-		MIT1002_02153	0.29	-1.1
2,409,880	+		MIT1002_02153	0.32	+1.3
2,409,894	-		MIT1002_02153	0.33	-0.5
2,409,901	+		MIT1002_02153	0.33	-0.3
2,409,935	+		MIT1002_02153	0.35	+0.4
2,410,010	+		MIT1002_02153	0.39	+0.4
2,410,017	+		MIT1002_02153	0.40	-2.8
2,410,037	-		MIT1002_02153	0.41	+1.1
2,410,043	-		MIT1002_02153	0.41	-0.5
2,410,052	+		MIT1002_02153	0.42	-1.0
2,410,091	+		MIT1002_02153	0.44	+0.4
2,410,110	+		MIT1002_02153	0.45	-0.4
2,410,118	+		MIT1002_02153	0.45	-0.9
2,410,161	-		MIT1002_02153	0.48	-0.3
2,410,173	-		MIT1002_02153	0.48	+0.3
2,410,173	-		MIT1002_02153	0.48	-1.1
2,410,248	+		MIT1002_02153	0.53	+1.0
2,410,364	+		MIT1002_02153	0.59	-0.7
2,410,432	+		MIT1002_02153	0.63	+0.3
2,410,590	+		MIT1002_02153	0.71	-0.0
2,410,590	+		MIT1002_02153	0.71	-0.2
2,410,593	-		MIT1002_02153	0.72	-2.0
2,410,620	+		MIT1002_02153	0.73	-1.3
2,410,628	-		MIT1002_02153	0.73	-0.2
2,410,685	+		MIT1002_02153	0.77	-2.0
2,410,710	+		MIT1002_02153	0.78	+0.2
2,410,730	+		MIT1002_02153	0.79	+0.5
2,410,807	-		MIT1002_02153	0.83	-1.5
2,410,814	-		MIT1002_02153	0.84	-0.5
2,410,814	-		MIT1002_02153	0.84	-2.0
2,410,898	+		MIT1002_02153	0.88	-1.4
2,410,898	+		MIT1002_02153	0.88	-0.9
2,410,906	-		MIT1002_02153	0.89	-1.1
2,410,906	-		MIT1002_02153	0.89	-1.5
2,411,051	+				+0.0
2,411,059	-				-0.9
2,411,114	-				+0.7
2,411,193	-				-1.5
2,411,236	+		MIT1002_02154	0.15	-0.6
2,411,242	+		MIT1002_02154	0.16	+0.1
2,411,400	-		MIT1002_02154	0.40	-0.7
2,411,746	-				-1.5
2,411,809	-				+0.4
2,411,858	+				-2.5
2,411,866	+				+1.8
2,411,866	+				+1.0
2,411,866	+				+1.3
2,411,874	-				+3.3
2,411,874	-				-0.8
2,411,874	-				+1.2
2,412,087	+		MIT1002_02155	0.17	-0.2
2,412,087	+		MIT1002_02155	0.17	-0.2
2,412,095	-		MIT1002_02155	0.18	+0.2
2,412,095	-		MIT1002_02155	0.18	-0.2
2,412,095	-		MIT1002_02155	0.18	-0.3
2,412,097	+		MIT1002_02155	0.18	+0.6
2,412,099	+		MIT1002_02155	0.18	-0.3
2,412,109	-		MIT1002_02155	0.20	-0.9