Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02047

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
2,299,827	-		MIT1002_02046	0.58	-0.6
2,299,863	-		MIT1002_02046	0.60	+2.0
2,299,896	-		MIT1002_02046	0.62	-0.3
2,299,916	+		MIT1002_02046	0.64	-0.6
2,299,975	+		MIT1002_02046	0.67	+0.1
2,299,975	+		MIT1002_02046	0.67	-3.0
2,299,975	+		MIT1002_02046	0.67	+0.1
2,299,983	-		MIT1002_02046	0.68	+0.3
2,299,983	-		MIT1002_02046	0.68	+0.8
2,300,042	+		MIT1002_02046	0.72	+0.0
2,300,114	-		MIT1002_02046	0.76	-0.1
2,300,116	+		MIT1002_02046	0.77	+1.3
2,300,124	-		MIT1002_02046	0.77	-0.7
2,300,185	+		MIT1002_02046	0.81	-0.6
2,300,210	-		MIT1002_02046	0.83	+0.3
2,300,285	+		MIT1002_02046	0.88	-0.7
2,300,376	-				-1.7
2,300,383	+				-0.6
2,300,391	-				+0.6
2,300,741	+				+0.2
2,300,957	-		MIT1002_02047	0.13	+0.2
2,300,988	+		MIT1002_02047	0.15	+0.6
2,301,022	-		MIT1002_02047	0.18	+0.4
2,301,092	+		MIT1002_02047	0.23	-1.0
2,301,111	+		MIT1002_02047	0.24	+0.2
2,301,119	-		MIT1002_02047	0.25	+0.3
2,301,239	+		MIT1002_02047	0.33	-0.5
2,301,263	+		MIT1002_02047	0.35	-0.1
2,301,264	-		MIT1002_02047	0.35	-0.4
2,301,271	-		MIT1002_02047	0.36	-2.0
2,301,277	-		MIT1002_02047	0.36	+0.4
2,301,291	-		MIT1002_02047	0.37	-1.1
2,301,363	+		MIT1002_02047	0.42	+1.9
2,301,485	-		MIT1002_02047	0.51	-1.2
2,301,490	-		MIT1002_02047	0.52	-1.8
2,301,551	+		MIT1002_02047	0.56	-0.2
2,301,551	+		MIT1002_02047	0.56	+0.2
2,301,641	-		MIT1002_02047	0.63	+0.9
2,301,669	-		MIT1002_02047	0.65	-2.5
2,301,669	-		MIT1002_02047	0.65	-0.2
2,301,718	-		MIT1002_02047	0.68	-0.8
2,301,792	-		MIT1002_02047	0.74	-2.1
2,301,859	-		MIT1002_02047	0.79	-1.0
2,301,908	-		MIT1002_02047	0.82	-0.3
2,301,908	-		MIT1002_02047	0.82	+0.8
2,301,965	-		MIT1002_02047	0.86	-2.4
2,302,073	+				+0.4
2,302,148	+				+0.5
2,302,234	-				-1.5
2,302,239	-				+1.8
2,302,239	-				-1.5
2,302,242	-				-0.0
2,302,274	+				-1.1
2,302,363	-				+0.2
2,302,396	+				+1.0
2,302,487	+		MIT1002_02048	0.13	-1.3
2,302,489	+		MIT1002_02048	0.13	-0.0
2,302,575	+		MIT1002_02048	0.18	-0.9
2,302,608	+		MIT1002_02048	0.20	-0.5
2,302,608	+		MIT1002_02048	0.20	-0.0
2,302,608	+		MIT1002_02048	0.20	-0.5
2,302,608	+		MIT1002_02048	0.20	+0.2
2,302,616	-		MIT1002_02048	0.20	+0.6
2,302,616	-		MIT1002_02048	0.20	+1.2
2,302,616	-		MIT1002_02048	0.20	+0.7
2,302,616	-		MIT1002_02048	0.20	-1.0
2,302,616	-		MIT1002_02048	0.20	-1.7
2,302,616	-		MIT1002_02048	0.20	-0.1
2,302,748	-		MIT1002_02048	0.27	+3.3
2,302,758	+		MIT1002_02048	0.28	+1.2
2,302,766	-		MIT1002_02048	0.28	+1.0
2,302,818	+		MIT1002_02048	0.31	-1.6
2,302,828	+		MIT1002_02048	0.31	+0.2
2,302,828	+		MIT1002_02048	0.31	-0.4
2,302,857	-		MIT1002_02048	0.33	+0.1
2,302,869	-		MIT1002_02048	0.33	+0.2
2,303,003	+		MIT1002_02048	0.41	-0.3
2,303,003	+		MIT1002_02048	0.41	+1.3
2,303,011	-		MIT1002_02048	0.41	-0.0
2,303,028	+		MIT1002_02048	0.42	-0.4
2,303,078	-		MIT1002_02048	0.45	+0.7
2,303,121	-		MIT1002_02048	0.47	-1.5