Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02029

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
2,272,062	-		MIT1002_02028	0.61	-0.1
2,272,134	-		MIT1002_02028	0.64	+1.5
2,272,151	-		MIT1002_02028	0.65	+0.1
2,272,198	-		MIT1002_02028	0.66	-0.3
2,272,198	-		MIT1002_02028	0.66	+0.4
2,272,217	+		MIT1002_02028	0.67	-1.2
2,272,217	+		MIT1002_02028	0.67	+0.7
2,272,225	-		MIT1002_02028	0.67	+0.4
2,272,255	-		MIT1002_02028	0.69	+2.1
2,272,258	+		MIT1002_02028	0.69	-0.7
2,272,270	+		MIT1002_02028	0.69	-0.3
2,272,278	-		MIT1002_02028	0.70	+1.4
2,272,354	-		MIT1002_02028	0.72	+0.4
2,272,522	+		MIT1002_02028	0.79	+0.6
2,272,530	-		MIT1002_02028	0.79	-0.1
2,272,604	+		MIT1002_02028	0.82	-1.5
2,272,611	+		MIT1002_02028	0.82	+1.4
2,272,614	+		MIT1002_02028	0.82	-0.6
2,272,622	-		MIT1002_02028	0.83	-1.2
2,272,622	-		MIT1002_02028	0.83	+0.3
2,272,627	+		MIT1002_02028	0.83	+1.5
2,272,846	+				-1.2
2,272,997	-				-1.2
2,273,075	-				-2.3
2,273,075	-				-1.1
2,273,172	+		MIT1002_02029	0.46	-0.1
2,273,180	-		MIT1002_02029	0.49	+0.8
2,273,232	+		MIT1002_02029	0.71	-0.3
2,273,291	-				-1.7
2,273,358	-				+1.2
2,273,361	-				-0.8
2,273,361	-				+1.2
2,273,393	-				-1.8
2,273,539	-				-1.6
2,273,589	+				-0.9
2,273,597	-				-0.2
2,273,609	-				-2.8
2,273,693	+				-1.6
2,273,693	+				-0.6
2,273,701	-				-0.6
2,273,826	+				-1.4
2,273,896	+		MIT1002_02030	0.13	-3.9
2,273,931	+		MIT1002_02030	0.14	-0.9
2,273,954	-		MIT1002_02030	0.15	-1.0
2,273,955	-		MIT1002_02030	0.15	-3.5
2,273,958	+		MIT1002_02030	0.16	-0.7
2,273,983	+		MIT1002_02030	0.17	-4.5
2,274,088	+		MIT1002_02030	0.22	-3.2
2,274,110	+		MIT1002_02030	0.23	-2.0
2,274,148	+		MIT1002_02030	0.25	-1.9
2,274,151	-		MIT1002_02030	0.25	-1.6
2,274,156	-		MIT1002_02030	0.25	-1.7
2,274,159	+		MIT1002_02030	0.25	+0.0
2,274,161	-		MIT1002_02030	0.25	+0.3
2,274,161	-		MIT1002_02030	0.25	+0.2
2,274,167	-		MIT1002_02030	0.26	-0.6
2,274,175	-		MIT1002_02030	0.26	-0.6
2,274,231	+		MIT1002_02030	0.29	-1.9
2,274,250	+		MIT1002_02030	0.30	-0.0
2,274,285	-		MIT1002_02030	0.31	-0.2