Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01767

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,959,703	+		MIT1002_01763	0.24	-3.5
1,959,719	-		MIT1002_01763	0.29	-1.2
1,959,726	-		MIT1002_01763	0.32	-4.4
1,959,922	+				+0.5
1,960,249	+				+0.3
1,960,309	+		MIT1002_01765	0.58	-1.8
1,960,525	-				+0.8
1,960,692	-				-0.8
1,960,709	-				+0.4
1,960,836	+				-0.4
1,960,926	+				+0.1
1,960,995	+		MIT1002_01767	0.10	+1.0
1,961,025	+		MIT1002_01767	0.11	+1.3
1,961,040	-		MIT1002_01767	0.12	-3.6
1,961,059	+		MIT1002_01767	0.12	+3.3
1,961,059	+		MIT1002_01767	0.12	+0.8
1,961,151	-		MIT1002_01767	0.15	-0.2
1,961,207	-		MIT1002_01767	0.17	+1.0
1,961,269	+		MIT1002_01767	0.18	-1.0
1,961,277	-		MIT1002_01767	0.19	-0.9
1,961,300	-		MIT1002_01767	0.19	-0.9
1,961,484	-		MIT1002_01767	0.25	-1.4
1,961,539	+		MIT1002_01767	0.27	-0.7
1,961,539	+		MIT1002_01767	0.27	-1.6
1,961,547	-		MIT1002_01767	0.27	-0.7
1,961,555	+		MIT1002_01767	0.27	+1.1
1,961,556	+		MIT1002_01767	0.27	+1.2
1,961,570	-		MIT1002_01767	0.28	-0.5
1,961,570	-		MIT1002_01767	0.28	+0.7
1,961,570	-		MIT1002_01767	0.28	-2.0
1,961,595	+		MIT1002_01767	0.28	-1.5
1,961,647	-		MIT1002_01767	0.30	-0.0
1,961,660	+		MIT1002_01767	0.30	-1.3
1,961,667	-		MIT1002_01767	0.30	-3.0
1,961,705	-		MIT1002_01767	0.32	+0.9
1,961,722	+		MIT1002_01767	0.32	-1.0
1,961,722	+		MIT1002_01767	0.32	-0.2
1,961,722	+		MIT1002_01767	0.32	+0.0
1,961,722	+		MIT1002_01767	0.32	+0.9
1,961,722	+		MIT1002_01767	0.32	-1.1
1,961,722	+		MIT1002_01767	0.32	+0.7
1,961,722	+		MIT1002_01767	0.32	-1.0
1,961,722	+		MIT1002_01767	0.32	+0.4
1,961,730	-		MIT1002_01767	0.32	+1.1
1,961,730	-		MIT1002_01767	0.32	-0.7
1,961,730	-		MIT1002_01767	0.32	-0.2
1,961,830	+		MIT1002_01767	0.35	+0.2
1,961,882	+		MIT1002_01767	0.37	-0.3
1,961,957	-		MIT1002_01767	0.39	+1.0
1,961,975	-		MIT1002_01767	0.40	+1.2
1,962,011	-		MIT1002_01767	0.41	-2.0
1,962,053	-		MIT1002_01767	0.42	+0.6
1,962,100	+		MIT1002_01767	0.43	+1.0
1,962,100	+		MIT1002_01767	0.43	-0.8
1,962,100	+		MIT1002_01767	0.43	-3.6
1,962,113	+		MIT1002_01767	0.44	+0.1
1,962,116	-		MIT1002_01767	0.44	-0.0
1,962,147	+		MIT1002_01767	0.45	+0.8
1,962,147	+		MIT1002_01767	0.45	-0.5
1,962,157	+		MIT1002_01767	0.45	+0.2
1,962,159	+		MIT1002_01767	0.45	-0.9
1,962,234	-		MIT1002_01767	0.47	+0.1
1,962,332	-		MIT1002_01767	0.50	-1.3
1,962,355	+		MIT1002_01767	0.51	-0.8
1,962,392	-		MIT1002_01767	0.52	-0.2
1,962,580	+		MIT1002_01767	0.58	-2.8
1,962,588	-		MIT1002_01767	0.58	+0.5
1,962,596	-		MIT1002_01767	0.58	+0.3
1,962,656	+		MIT1002_01767	0.60	-0.6
1,962,662	-		MIT1002_01767	0.60	-1.9
1,962,674	-		MIT1002_01767	0.61	+1.0
1,962,722	+		MIT1002_01767	0.62	-1.5
1,962,750	-		MIT1002_01767	0.63	-0.8
1,962,750	-		MIT1002_01767	0.63	-1.4
1,962,788	+		MIT1002_01767	0.64	-0.3
1,962,789	+		MIT1002_01767	0.64	-0.4
1,962,789	+		MIT1002_01767	0.64	+0.0
1,962,804	-		MIT1002_01767	0.65	+0.1
1,962,809	+		MIT1002_01767	0.65	-2.5
1,962,809	+		MIT1002_01767	0.65	-0.5
1,962,817	-		MIT1002_01767	0.65	-1.7
1,962,817	-		MIT1002_01767	0.65	+2.0
1,962,822	-		MIT1002_01767	0.65	-0.4
1,963,062	+		MIT1002_01767	0.72	-0.2
1,963,062	+		MIT1002_01767	0.72	+0.7
1,963,070	-		MIT1002_01767	0.72	+1.3
1,963,144	-		MIT1002_01767	0.75	-1.1
1,963,169	-		MIT1002_01767	0.75	-2.7
1,963,244	-		MIT1002_01767	0.78	-1.6
1,963,253	-		MIT1002_01767	0.78	+0.4
1,963,289	-		MIT1002_01767	0.79	-0.1
1,963,345	+		MIT1002_01767	0.81	+0.1
1,963,358	-		MIT1002_01767	0.81	-0.4
1,963,376	+		MIT1002_01767	0.82	-0.3
1,963,384	-		MIT1002_01767	0.82	-0.1
1,963,475	-		MIT1002_01767	0.85	-1.6
1,963,526	+		MIT1002_01767	0.86	-1.1
1,963,541	-		MIT1002_01767	0.87	+0.3
1,963,582	+		MIT1002_01767	0.88	+0.9
1,963,589	+		MIT1002_01767	0.88	-1.3
1,963,597	+		MIT1002_01767	0.88	-0.3
1,963,625	+		MIT1002_01767	0.89	-0.3
1,963,646	-		MIT1002_01767	0.90	+0.5
1,963,668	+				-0.9
1,963,690	+				-0.9
1,963,698	-				-0.3
1,963,709	+				-0.7
1,963,811	-				+1.8
1,963,814	+				+0.1
1,963,824	+				-1.0
1,963,832	-				+0.3
1,963,832	-				-1.4
1,963,837	-				+0.9
1,963,872	+				+0.0
1,963,872	+				-0.1
1,963,873	+				-0.6
1,963,967	-				-0.6
1,964,068	+				+0.2
1,964,198	+		MIT1002_01768	0.20	+0.5
1,964,198	+		MIT1002_01768	0.20	+0.2
1,964,314	+		MIT1002_01768	0.31	-0.8
1,964,327	-		MIT1002_01768	0.32	-2.4
1,964,327	-		MIT1002_01768	0.32	+0.0
1,964,331	+		MIT1002_01768	0.33	-1.3
1,964,332	-		MIT1002_01768	0.33	+0.1
1,964,339	-		MIT1002_01768	0.34	-0.8
1,964,346	+		MIT1002_01768	0.34	-0.2
1,964,361	+		MIT1002_01768	0.36	-1.6
1,964,369	-		MIT1002_01768	0.37	-0.3
1,964,401	+		MIT1002_01768	0.40	+0.3
1,964,419	+		MIT1002_01768	0.42	+0.7
1,964,425	-		MIT1002_01768	0.42	+1.3
1,964,566	+		MIT1002_01768	0.56	-1.1
1,964,574	-		MIT1002_01768	0.57	+0.4
1,964,600	+		MIT1002_01768	0.60	-0.8
1,964,659	+		MIT1002_01768	0.66	-0.1
1,964,729	+		MIT1002_01768	0.73	+1.7
1,964,764	-		MIT1002_01768	0.76	-0.2
1,964,764	-		MIT1002_01768	0.76	-1.5
1,964,765	+		MIT1002_01768	0.76	-0.3
1,964,773	-		MIT1002_01768	0.77	-0.5
1,964,773	-		MIT1002_01768	0.77	-0.7
1,964,773	-		MIT1002_01768	0.77	+0.2
1,964,782	+		MIT1002_01768	0.78	+1.7
1,964,808	+		MIT1002_01768	0.80	+1.3