Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01625

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,789,594	+				+0.1
1,789,594	+				+0.1
1,789,602	-				+0.0
1,789,609	-				+0.0
1,789,609	-				+0.1
1,789,609	-				+0.4
1,789,625	-				+0.0
1,789,819	+		MIT1002_01624	0.15	+0.3
1,789,831	+		MIT1002_01624	0.17	+1.0
1,790,025	-		MIT1002_01624	0.39	-0.3
1,790,068	-		MIT1002_01624	0.44	-0.2
1,790,078	+		MIT1002_01624	0.45	+2.7
1,790,080	+		MIT1002_01624	0.45	-2.9
1,790,123	-		MIT1002_01624	0.50	-1.4
1,790,207	+		MIT1002_01624	0.59	-0.2
1,790,231	-		MIT1002_01624	0.62	-0.9
1,790,256	+		MIT1002_01624	0.65	+0.8
1,790,401	-		MIT1002_01624	0.81	+0.6
1,790,412	-		MIT1002_01624	0.83	-0.1
1,790,438	-		MIT1002_01624	0.86	+0.2
1,790,487	+				-3.7
1,790,551	+				-0.2
1,790,619	-				+0.6
1,790,901	+		MIT1002_01625	0.22	+0.4
1,790,973	+		MIT1002_01625	0.27	+0.8
1,790,984	-		MIT1002_01625	0.28	+1.2
1,790,994	+		MIT1002_01625	0.29	+2.5
1,790,995	-		MIT1002_01625	0.29	-0.9
1,791,002	-		MIT1002_01625	0.29	-0.0
1,791,032	-		MIT1002_01625	0.32	-0.3
1,791,069	+		MIT1002_01625	0.34	+1.3
1,791,082	-		MIT1002_01625	0.35	-0.7
1,791,124	+		MIT1002_01625	0.38	+0.4
1,791,189	-		MIT1002_01625	0.43	+1.5
1,791,192	+		MIT1002_01625	0.43	-1.1
1,791,228	+		MIT1002_01625	0.45	+0.5
1,791,287	-		MIT1002_01625	0.49	+0.9
1,791,318	+		MIT1002_01625	0.52	-0.9
1,791,326	+		MIT1002_01625	0.52	+0.4
1,791,326	-		MIT1002_01625	0.52	+0.9
1,791,331	+		MIT1002_01625	0.52	+0.3
1,791,334	-		MIT1002_01625	0.53	+1.1
1,791,339	-		MIT1002_01625	0.53	+1.8
1,791,339	-		MIT1002_01625	0.53	-0.6
1,791,437	-		MIT1002_01625	0.60	+1.2
1,791,453	+		MIT1002_01625	0.61	+1.0
1,791,521	+		MIT1002_01625	0.66	-0.4
1,791,528	+		MIT1002_01625	0.66	+1.1
1,791,529	-		MIT1002_01625	0.66	+0.9
1,791,536	-		MIT1002_01625	0.67	+1.0
1,791,587	+		MIT1002_01625	0.70	+2.4
1,791,595	-		MIT1002_01625	0.71	+0.3
1,791,616	+		MIT1002_01625	0.72	+0.1
1,791,616	+		MIT1002_01625	0.72	-1.1
1,791,616	+		MIT1002_01625	0.72	+1.9
1,791,616	+		MIT1002_01625	0.72	+0.6
1,791,622	+		MIT1002_01625	0.73	-0.7
1,791,622	+		MIT1002_01625	0.73	+1.2
1,791,624	-		MIT1002_01625	0.73	+0.4
1,791,624	-		MIT1002_01625	0.73	+0.1
1,791,640	-		MIT1002_01625	0.74	+1.4
1,791,640	-		MIT1002_01625	0.74	+0.8
1,791,672	-		MIT1002_01625	0.76	+1.6
1,791,703	+		MIT1002_01625	0.79	-1.2
1,791,744	+		MIT1002_01625	0.81	-0.3
1,791,753	-		MIT1002_01625	0.82	+0.2
1,791,753	-		MIT1002_01625	0.82	+1.1
1,791,753	-		MIT1002_01625	0.82	+1.5
1,791,753	-		MIT1002_01625	0.82	+1.9
1,791,779	+		MIT1002_01625	0.84	+0.7
1,791,817	-		MIT1002_01625	0.87	+0.1
1,791,823	+		MIT1002_01625	0.87	-0.7
1,791,826	-		MIT1002_01625	0.87	+0.3
1,791,836	-		MIT1002_01625	0.88	+0.6
1,791,880	+				+1.3
1,791,880	+				+1.2
1,791,891	+				-0.2
1,791,910	+				+1.5
1,791,918	+				+1.2
1,791,921	-				+1.1
1,791,921	-				-0.2
1,791,921	-				+0.1
1,791,924	+				+0.3
1,791,925	+				+0.6
1,791,925	+				-3.4
1,791,933	-				+2.5
1,791,934	-				-0.4
1,791,992	+				+1.2
1,792,105	+				+0.4
1,792,105	+				-1.7
1,792,105	+				+1.4
1,792,105	+				-2.5
1,792,105	+				+0.6
1,792,105	+				+0.1
1,792,113	-				+0.4
1,792,113	-				-2.0
1,792,113	-				+0.1
1,792,113	-				-1.5
1,792,113	-				+0.7
1,792,113	-				+0.7
1,792,113	-				-0.1
1,792,113	-				+1.3
1,792,118	+				-2.6
1,792,119	-				-0.4
1,792,126	-				-0.1
1,792,132	+		MIT1002_01626	0.10	+0.5
1,792,133	+		MIT1002_01626	0.10	-0.3
1,792,141	-		MIT1002_01626	0.11	+0.1
1,792,150	-		MIT1002_01626	0.12	+1.5
1,792,150	-		MIT1002_01626	0.12	+0.9
1,792,159	+		MIT1002_01626	0.12	-0.3
1,792,166	+		MIT1002_01626	0.13	+0.9
1,792,166	+		MIT1002_01626	0.13	+1.0
1,792,166	+		MIT1002_01626	0.13	+1.4
1,792,174	-		MIT1002_01626	0.13	-1.1
1,792,187	+		MIT1002_01626	0.15	+0.1
1,792,187	+		MIT1002_01626	0.15	+0.2
1,792,187	+		MIT1002_01626	0.15	+1.2
1,792,187	+		MIT1002_01626	0.15	-1.3
1,792,187	+		MIT1002_01626	0.15	+0.6
1,792,187	+		MIT1002_01626	0.15	-0.6
1,792,187	+		MIT1002_01626	0.15	-1.7
1,792,195	-		MIT1002_01626	0.15	-0.8
1,792,195	-		MIT1002_01626	0.15	+0.1
1,792,195	-		MIT1002_01626	0.15	+0.4
1,792,195	-		MIT1002_01626	0.15	+0.1
1,792,195	-		MIT1002_01626	0.15	-0.4
1,792,195	-		MIT1002_01626	0.15	-3.0
1,792,195	-		MIT1002_01626	0.15	+0.4
1,792,195	-		MIT1002_01626	0.15	+0.4
1,792,195	-		MIT1002_01626	0.15	+0.5
1,792,198	+		MIT1002_01626	0.15	+1.4
1,792,203	+		MIT1002_01626	0.16	+0.9
1,792,203	+		MIT1002_01626	0.16	+0.5
1,792,206	-		MIT1002_01626	0.16	+0.2
1,792,210	+		MIT1002_01626	0.16	+2.4
1,792,210	+		MIT1002_01626	0.16	+1.4
1,792,218	-		MIT1002_01626	0.17	+0.4
1,792,223	-		MIT1002_01626	0.17	+0.4
1,792,245	-		MIT1002_01626	0.19	+0.2
1,792,256	+		MIT1002_01626	0.20	-0.2
1,792,256	+		MIT1002_01626	0.20	+0.1
1,792,258	+		MIT1002_01626	0.20	-0.1
1,792,264	-		MIT1002_01626	0.21	-1.1
1,792,264	-		MIT1002_01626	0.21	-3.5
1,792,265	-		MIT1002_01626	0.21	+3.3
1,792,265	-		MIT1002_01626	0.21	-2.7
1,792,276	-		MIT1002_01626	0.22	+0.6
1,792,276	-		MIT1002_01626	0.22	-0.6
1,792,282	+		MIT1002_01626	0.22	-0.3
1,792,282	+		MIT1002_01626	0.22	+0.0
1,792,282	+		MIT1002_01626	0.22	-1.8
1,792,282	+		MIT1002_01626	0.22	-0.2
1,792,282	+		MIT1002_01626	0.22	+0.5
1,792,282	+		MIT1002_01626	0.22	+1.1
1,792,282	+		MIT1002_01626	0.22	+0.3
1,792,282	+		MIT1002_01626	0.22	-0.3
1,792,290	-		MIT1002_01626	0.23	-0.4
1,792,290	-		MIT1002_01626	0.23	-0.8
1,792,290	-		MIT1002_01626	0.23	-1.4
1,792,290	-		MIT1002_01626	0.23	+0.6
1,792,290	-		MIT1002_01626	0.23	-0.4
1,792,290	-		MIT1002_01626	0.23	-0.5
1,792,290	-		MIT1002_01626	0.23	-2.1
1,792,344	+		MIT1002_01626	0.27	-2.0
1,792,344	+		MIT1002_01626	0.27	+1.4
1,792,344	+		MIT1002_01626	0.27	-1.5
1,792,349	+		MIT1002_01626	0.28	+1.5
1,792,352	-		MIT1002_01626	0.28	+0.3
1,792,352	-		MIT1002_01626	0.28	-1.1
1,792,382	+		MIT1002_01626	0.30	+0.2
1,792,442	+		MIT1002_01626	0.35	-0.8
1,792,442	+		MIT1002_01626	0.35	+0.1
1,792,447	+		MIT1002_01626	0.36	-3.2
1,792,450	-		MIT1002_01626	0.36	-0.2
1,792,450	-		MIT1002_01626	0.36	+0.8
1,792,450	-		MIT1002_01626	0.36	+1.1
1,792,460	-		MIT1002_01626	0.37	+1.4
1,792,516	+		MIT1002_01626	0.41	+1.0
1,792,560	-		MIT1002_01626	0.45	-0.4
1,792,563	+		MIT1002_01626	0.45	-1.1
1,792,571	-		MIT1002_01626	0.46	-0.4
1,792,571	-		MIT1002_01626	0.46	-0.6
1,792,572	+		MIT1002_01626	0.46	-0.0
1,792,586	-		MIT1002_01626	0.47	+0.9
1,792,598	+		MIT1002_01626	0.48	-1.3
1,792,600	+		MIT1002_01626	0.48	+1.1
1,792,600	+		MIT1002_01626	0.48	-0.1
1,792,600	+		MIT1002_01626	0.48	+0.9
1,792,600	+		MIT1002_01626	0.48	-0.2
1,792,600	+		MIT1002_01626	0.48	-0.9
1,792,600	+		MIT1002_01626	0.48	+2.1
1,792,600	+		MIT1002_01626	0.48	-2.9
1,792,600	+		MIT1002_01626	0.48	+1.5
1,792,600	+		MIT1002_01626	0.48	+1.0
1,792,600	+		MIT1002_01626	0.48	+0.4
1,792,600	+		MIT1002_01626	0.48	-0.9
1,792,600	+		MIT1002_01626	0.48	-0.3
1,792,600	+		MIT1002_01626	0.48	+0.2
1,792,600	+		MIT1002_01626	0.48	+2.8
1,792,600	+		MIT1002_01626	0.48	+1.6
1,792,600	+		MIT1002_01626	0.48	-0.0
1,792,600	+		MIT1002_01626	0.48	+0.8
1,792,600	+		MIT1002_01626	0.48	-0.8
1,792,600	+		MIT1002_01626	0.48	+0.9
1,792,600	+		MIT1002_01626	0.48	+2.2
1,792,600	+		MIT1002_01626	0.48	-1.6
1,792,600	+		MIT1002_01626	0.48	-1.1
1,792,606	+		MIT1002_01626	0.49	-0.2
1,792,606	-		MIT1002_01626	0.49	+1.5
1,792,606	-		MIT1002_01626	0.49	+1.8
1,792,608	-		MIT1002_01626	0.49	-0.6
1,792,608	-		MIT1002_01626	0.49	+0.2
1,792,608	-		MIT1002_01626	0.49	+0.0
1,792,608	-		MIT1002_01626	0.49	+0.3
1,792,608	-		MIT1002_01626	0.49	+0.6
1,792,608	-		MIT1002_01626	0.49	+0.8
1,792,608	-		MIT1002_01626	0.49	-0.2
1,792,608	-		MIT1002_01626	0.49	+1.6
1,792,608	-		MIT1002_01626	0.49	+0.4
1,792,608	-		MIT1002_01626	0.49	+0.4
1,792,608	-		MIT1002_01626	0.49	-1.9
1,792,608	-		MIT1002_01626	0.49	-1.8
1,792,608	-		MIT1002_01626	0.49	-2.1
1,792,608	-		MIT1002_01626	0.49	+0.1
1,792,608	-		MIT1002_01626	0.49	+0.4
1,792,608	-		MIT1002_01626	0.49	+0.5
1,792,608	-		MIT1002_01626	0.49	-0.2
1,792,608	-		MIT1002_01626	0.49	-0.3
1,792,608	-		MIT1002_01626	0.49	-0.7
1,792,608	-		MIT1002_01626	0.49	-0.6
1,792,608	-		MIT1002_01626	0.49	+0.6
1,792,608	-		MIT1002_01626	0.49	+0.7
1,792,608	-		MIT1002_01626	0.49	+0.1
1,792,622	+		MIT1002_01626	0.50	+2.2
1,792,622	+		MIT1002_01626	0.50	-0.0
1,792,630	-		MIT1002_01626	0.51	+0.9
1,792,632	+		MIT1002_01626	0.51	+0.4
1,792,632	+		MIT1002_01626	0.51	+0.2
1,792,632	+		MIT1002_01626	0.51	-0.6
1,792,632	+		MIT1002_01626	0.51	+0.2
1,792,637	+		MIT1002_01626	0.51	-1.3
1,792,640	-		MIT1002_01626	0.51	-0.8
1,792,640	-		MIT1002_01626	0.51	-0.8
1,792,640	-		MIT1002_01626	0.51	-0.4
1,792,640	-		MIT1002_01626	0.51	-0.4
1,792,642	+		MIT1002_01626	0.52	-0.3
1,792,642	+		MIT1002_01626	0.52	+0.9
1,792,642	+		MIT1002_01626	0.52	-0.4
1,792,650	-		MIT1002_01626	0.52	-0.1
1,792,650	-		MIT1002_01626	0.52	+0.1
1,792,688	-		MIT1002_01626	0.55	+1.2
1,792,755	+		MIT1002_01626	0.61	+0.7
1,792,755	+		MIT1002_01626	0.61	+1.3
1,792,755	+		MIT1002_01626	0.61	-2.1
1,792,755	+		MIT1002_01626	0.61	+0.7
1,792,755	+		MIT1002_01626	0.61	-0.1
1,792,755	+		MIT1002_01626	0.61	-0.0
1,792,763	-		MIT1002_01626	0.61	-0.0
1,792,763	-		MIT1002_01626	0.61	-0.4
1,792,763	-		MIT1002_01626	0.61	+1.4
1,792,763	-		MIT1002_01626	0.61	+0.9
1,792,763	-		MIT1002_01626	0.61	-1.1
1,792,763	-		MIT1002_01626	0.61	+1.1
1,792,763	-		MIT1002_01626	0.61	+0.4
1,792,765	+		MIT1002_01626	0.62	+0.3
1,792,765	+		MIT1002_01626	0.62	+1.1
1,792,765	+		MIT1002_01626	0.62	-0.6
1,792,765	+		MIT1002_01626	0.62	-0.8
1,792,765	+		MIT1002_01626	0.62	-0.2
1,792,773	-		MIT1002_01626	0.62	+0.9
1,792,773	-		MIT1002_01626	0.62	+0.6
1,792,773	-		MIT1002_01626	0.62	+0.4
1,792,773	-		MIT1002_01626	0.62	+0.3
1,792,775	-		MIT1002_01626	0.62	+1.7
1,792,781	-		MIT1002_01626	0.63	-0.6
1,792,801	+		MIT1002_01626	0.64	-1.4
1,792,801	+		MIT1002_01626	0.64	+0.4
1,792,839	+		MIT1002_01626	0.68	+0.1
1,792,849	+		MIT1002_01626	0.68	-0.2
1,792,862	+		MIT1002_01626	0.69	-0.4
1,792,870	-		MIT1002_01626	0.70	+0.4
1,792,877	+		MIT1002_01626	0.71	-0.6
1,792,877	+		MIT1002_01626	0.71	+0.6
1,792,877	-		MIT1002_01626	0.71	-0.4
1,792,955	+		MIT1002_01626	0.77	-0.6
1,793,004	+		MIT1002_01626	0.81	-1.6