Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01454

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,601,677	+				-0.3
1,601,678	-				-1.5
1,601,682	+				-0.4
1,601,682	+				-1.1
1,601,682	+				+1.5
1,601,682	+				+0.5
1,601,682	+				-0.0
1,601,682	+				-1.7
1,601,682	+				+2.2
1,601,682	+				+1.5
1,601,682	+				+1.2
1,601,685	-				+0.3
1,601,690	-				+0.1
1,601,690	-				-0.1
1,601,690	-				-0.9
1,601,690	-				+0.1
1,601,692	+				-0.4
1,601,704	+				+0.5
1,601,714	+		MIT1002_01453	0.10	-0.1
1,601,858	-		MIT1002_01453	0.32	+0.3
1,601,864	+		MIT1002_01453	0.33	+0.8
1,601,872	-		MIT1002_01453	0.34	-1.7
1,601,998	+		MIT1002_01453	0.53	-0.9
1,601,998	+		MIT1002_01453	0.53	-0.3
1,602,006	-		MIT1002_01453	0.54	-0.2
1,602,006	-		MIT1002_01453	0.54	+0.0
1,602,006	-		MIT1002_01453	0.54	+1.1
1,602,006	-		MIT1002_01453	0.54	+0.2
1,602,006	-		MIT1002_01453	0.54	-0.6
1,602,130	-		MIT1002_01453	0.73	+0.8
1,602,164	-		MIT1002_01453	0.78	+2.4
1,602,165	-		MIT1002_01453	0.78	-0.6
1,602,165	-		MIT1002_01453	0.78	+1.4
1,602,223	-		MIT1002_01453	0.87	-1.0
1,602,223	-		MIT1002_01453	0.87	-1.2
1,602,225	+		MIT1002_01453	0.87	-1.2
1,602,248	+				-0.7
1,602,249	+				+0.7
1,602,308	+				-0.8
1,602,314	-				-0.6
1,602,335	+				-0.7
1,602,603	+				+0.4
1,602,612	-				-1.7
1,602,783	-				+0.0
1,602,808	-				+0.6
1,602,810	+				-0.5
1,602,810	+				+1.5
1,602,833	+				+3.6
1,602,959	-		MIT1002_01454	0.11	-0.1
1,602,959	-		MIT1002_01454	0.11	+0.7
1,602,961	+		MIT1002_01454	0.11	-1.8
1,602,961	-		MIT1002_01454	0.11	+1.2
1,603,054	-		MIT1002_01454	0.14	+0.8
1,603,054	-		MIT1002_01454	0.14	-2.0
1,603,057	-		MIT1002_01454	0.14	-2.0
1,603,074	-		MIT1002_01454	0.15	-0.2
1,603,075	+		MIT1002_01454	0.15	+0.1
1,603,102	-		MIT1002_01454	0.15	+0.9
1,603,145	+		MIT1002_01454	0.17	-0.4
1,603,163	-		MIT1002_01454	0.17	+1.3
1,603,245	+		MIT1002_01454	0.19	+2.8
1,603,248	-		MIT1002_01454	0.20	+1.0
1,603,253	-		MIT1002_01454	0.20	+1.2
1,603,295	-		MIT1002_01454	0.21	-0.2
1,603,296	-		MIT1002_01454	0.21	-0.1
1,603,325	+		MIT1002_01454	0.22	-1.0
1,603,335	+		MIT1002_01454	0.22	+1.5
1,603,365	-		MIT1002_01454	0.23	+0.5
1,603,366	-		MIT1002_01454	0.23	-1.4
1,603,424	+		MIT1002_01454	0.25	-0.9
1,603,426	+		MIT1002_01454	0.25	+0.1
1,603,434	-		MIT1002_01454	0.25	+0.4
1,603,436	+		MIT1002_01454	0.25	-0.8
1,603,444	-		MIT1002_01454	0.25	+1.8
1,603,506	+		MIT1002_01454	0.27	+0.9
1,603,506	+		MIT1002_01454	0.27	-1.3
1,603,506	+		MIT1002_01454	0.27	+0.3
1,603,514	-		MIT1002_01454	0.27	-1.8
1,603,514	-		MIT1002_01454	0.27	-0.6
1,603,514	-		MIT1002_01454	0.27	+0.1
1,603,514	-		MIT1002_01454	0.27	+1.1
1,603,514	-		MIT1002_01454	0.27	-0.2
1,603,514	-		MIT1002_01454	0.27	-0.2
1,603,570	-		MIT1002_01454	0.29	-0.4
1,603,572	+		MIT1002_01454	0.29	+3.4
1,603,653	-		MIT1002_01454	0.31	-0.9
1,603,657	+		MIT1002_01454	0.31	-2.7
1,603,665	-		MIT1002_01454	0.31	+1.1
1,603,665	-		MIT1002_01454	0.31	+0.4
1,603,672	-		MIT1002_01454	0.32	-1.0
1,603,688	+		MIT1002_01454	0.32	-0.2
1,603,692	+		MIT1002_01454	0.32	+1.1
1,603,696	-		MIT1002_01454	0.32	+1.4
1,603,707	+		MIT1002_01454	0.33	+0.1
1,603,727	-		MIT1002_01454	0.33	-0.8
1,603,757	+		MIT1002_01454	0.34	+0.5
1,603,778	-		MIT1002_01454	0.35	-0.4
1,603,785	-		MIT1002_01454	0.35	-0.7
1,603,866	+		MIT1002_01454	0.37	+0.3
1,603,866	+		MIT1002_01454	0.37	-1.9
1,603,874	-		MIT1002_01454	0.37	+0.3
1,603,874	-		MIT1002_01454	0.37	-0.3
1,603,877	+		MIT1002_01454	0.37	+0.2
1,603,878	+		MIT1002_01454	0.37	-1.0
1,603,900	+		MIT1002_01454	0.38	+1.6
1,604,037	+		MIT1002_01454	0.42	-0.7
1,604,144	+		MIT1002_01454	0.45	+0.5
1,604,152	-		MIT1002_01454	0.45	-0.2
1,604,214	+		MIT1002_01454	0.47	-0.6
1,604,224	-		MIT1002_01454	0.47	+0.1
1,604,226	+		MIT1002_01454	0.47	+0.0
1,604,226	+		MIT1002_01454	0.47	-0.1
1,604,231	+		MIT1002_01454	0.47	-1.2
1,604,234	-		MIT1002_01454	0.48	-0.7
1,604,289	+		MIT1002_01454	0.49	+1.2
1,604,307	+		MIT1002_01454	0.50	+0.8
1,604,334	-		MIT1002_01454	0.50	+1.2
1,604,404	+		MIT1002_01454	0.52	-2.1
1,604,422	+		MIT1002_01454	0.53	-2.7
1,604,484	+		MIT1002_01454	0.55	+0.1
1,604,504	+		MIT1002_01454	0.55	+2.4
1,604,504	+		MIT1002_01454	0.55	-0.7
1,604,512	-		MIT1002_01454	0.55	+1.4
1,604,512	-		MIT1002_01454	0.55	-0.3
1,604,522	-		MIT1002_01454	0.56	-0.1
1,604,522	-		MIT1002_01454	0.56	+1.0
1,604,554	+		MIT1002_01454	0.57	+0.5
1,604,554	+		MIT1002_01454	0.57	+0.8
1,604,562	-		MIT1002_01454	0.57	-0.4
1,604,578	+		MIT1002_01454	0.57	+0.7
1,604,581	-		MIT1002_01454	0.57	-0.7
1,604,659	+		MIT1002_01454	0.60	+1.5
1,604,667	-		MIT1002_01454	0.60	+0.4
1,604,667	-		MIT1002_01454	0.60	-0.6
1,604,667	-		MIT1002_01454	0.60	+0.1
1,604,717	+		MIT1002_01454	0.61	-0.5
1,604,728	+		MIT1002_01454	0.62	-0.0
1,604,753	-		MIT1002_01454	0.62	+1.3
1,604,822	+		MIT1002_01454	0.64	-0.2
1,604,822	+		MIT1002_01454	0.64	-1.3
1,604,822	+		MIT1002_01454	0.64	+0.4
1,604,822	+		MIT1002_01454	0.64	+1.0
1,604,824	+		MIT1002_01454	0.64	-0.2
1,604,830	-		MIT1002_01454	0.65	+0.2
1,604,830	-		MIT1002_01454	0.65	-1.9
1,604,830	-		MIT1002_01454	0.65	-1.0
1,604,868	-		MIT1002_01454	0.66	-1.2
1,604,907	+		MIT1002_01454	0.67	-2.2
1,604,907	+		MIT1002_01454	0.67	-0.4
1,604,931	+		MIT1002_01454	0.67	-0.1
1,604,987	+		MIT1002_01454	0.69	+0.0
1,605,067	+		MIT1002_01454	0.71	+0.2
1,605,133	+		MIT1002_01454	0.73	-0.0
1,605,167	-		MIT1002_01454	0.74	-0.7
1,605,263	+		MIT1002_01454	0.77	+0.7
1,605,263	+		MIT1002_01454	0.77	-1.0
1,605,271	-		MIT1002_01454	0.77	+0.5
1,605,271	-		MIT1002_01454	0.77	+0.3
1,605,273	+		MIT1002_01454	0.77	+0.3
1,605,275	+		MIT1002_01454	0.77	+0.0
1,605,281	-		MIT1002_01454	0.77	+1.5
1,605,288	+		MIT1002_01454	0.78	+0.4
1,605,289	-		MIT1002_01454	0.78	-0.2
1,605,360	+		MIT1002_01454	0.80	-1.3
1,605,364	+		MIT1002_01454	0.80	+1.4
1,605,368	-		MIT1002_01454	0.80	+1.0
1,605,443	+		MIT1002_01454	0.82	-0.2
1,605,496	+		MIT1002_01454	0.83	+0.1
1,605,540	-		MIT1002_01454	0.85	+2.3
1,605,558	+		MIT1002_01454	0.85	-1.0
1,605,692	+		MIT1002_01454	0.89	-0.8
1,605,700	-		MIT1002_01454	0.89	-0.1
1,605,707	-		MIT1002_01454	0.89	-0.5
1,605,777	+				-0.3
1,605,777	+				+0.6
1,605,785	-				+0.7
1,605,790	+				+0.3
1,605,850	+				+0.4
1,605,889	+				+2.1
1,605,897	-				-0.5
1,605,902	+				-0.2
1,605,910	-				-1.8
1,605,940	+				+1.2
1,605,940	-				+1.2
1,605,951	+				+0.7
1,605,951	+				-0.3
1,605,951	+				+0.1
1,605,951	+				+3.1
1,605,951	+				-0.5
1,605,951	+				-0.4
1,605,959	-				+0.3
1,605,959	-				+2.0
1,605,959	-				-0.2
1,605,959	-				+1.6
1,605,959	-				-0.7
1,605,959	-				-0.2
1,605,959	-				-0.6
1,605,961	+				-0.5
1,606,270	+				+0.5
1,606,395	+				+1.3
1,606,403	-				-0.9
1,606,404	-				-0.6
1,606,429	+		MIT1002_01455	0.12	-1.2
1,606,429	+		MIT1002_01455	0.12	-1.2
1,606,437	-		MIT1002_01455	0.12	-0.5
1,606,452	+		MIT1002_01455	0.14	+0.1
1,606,452	+		MIT1002_01455	0.14	+0.4
1,606,460	-		MIT1002_01455	0.15	+1.3
1,606,460	-		MIT1002_01455	0.15	+0.7
1,606,510	+		MIT1002_01455	0.21	-0.7
1,606,535	-		MIT1002_01455	0.23	-0.2
1,606,588	+		MIT1002_01455	0.29	-0.7
1,606,593	-		MIT1002_01455	0.30	-0.9
1,606,621	+		MIT1002_01455	0.33	-1.5
1,606,730	-		MIT1002_01455	0.45	+1.8
1,606,878	+		MIT1002_01455	0.61	+0.1
1,606,896	+		MIT1002_01455	0.63	-0.1
1,606,900	+		MIT1002_01455	0.64	-1.7
1,606,995	+		MIT1002_01455	0.74	+0.4
1,606,995	-		MIT1002_01455	0.74	+0.3
1,607,001	+		MIT1002_01455	0.75	+0.5
1,607,001	+		MIT1002_01455	0.75	+0.0
1,607,011	+		MIT1002_01455	0.76	+1.1
1,607,033	+		MIT1002_01455	0.78	+0.3
1,607,071	+		MIT1002_01455	0.82	+0.4