Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01376

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,526,495	-		MIT1002_01375	0.32	+1.0
1,526,536	+		MIT1002_01375	0.36	-0.0
1,526,536	+		MIT1002_01375	0.36	-0.7
1,526,544	-		MIT1002_01375	0.36	+0.7
1,526,544	-		MIT1002_01375	0.36	-0.9
1,526,669	+		MIT1002_01375	0.46	+1.8
1,526,683	-		MIT1002_01375	0.47	+1.4
1,526,725	+		MIT1002_01375	0.50	-1.6
1,526,725	+		MIT1002_01375	0.50	+0.1
1,526,733	-		MIT1002_01375	0.51	-0.9
1,526,781	+		MIT1002_01375	0.55	-1.1
1,526,789	-		MIT1002_01375	0.55	+0.7
1,526,833	+		MIT1002_01375	0.59	+0.1
1,526,916	-		MIT1002_01375	0.65	+0.5
1,527,035	+		MIT1002_01375	0.75	-1.0
1,527,129	+		MIT1002_01375	0.82	-0.1
1,527,129	+		MIT1002_01375	0.82	+0.3
1,527,137	-		MIT1002_01375	0.83	-2.1
1,527,181	+		MIT1002_01375	0.86	-0.6
1,527,226	+		MIT1002_01375	0.90	-0.3
1,527,234	-				+1.7
1,527,234	-				-0.6
1,527,250	+				+1.3
1,527,297	-				-0.3
1,527,373	+				-1.0
1,527,373	+				+0.7
1,527,373	+				-1.1
1,527,381	-				-0.2
1,527,400	-				+0.9
1,527,509	-				+0.9
1,527,667	-		MIT1002_01376	0.66	+0.5
1,527,685	+		MIT1002_01376	0.72	+1.4
1,527,857	+				-2.1
1,527,857	+				+0.8
1,527,859	+				-0.6
1,527,918	+				+0.4
1,527,918	+				-0.2
1,527,936	-				-0.7
1,527,946	-				+1.4
1,527,985	-				-1.2
1,528,066	-				+0.3
1,528,099	-				+0.5
1,528,154	-				-0.1
1,528,154	-				+0.3
1,528,167	-				+0.4
1,528,217	+				+1.7
1,528,262	-				+0.2
1,528,356	+		MIT1002_01377	0.24	+0.7
1,528,374	-		MIT1002_01377	0.27	-1.3
1,528,374	-		MIT1002_01377	0.27	-0.2
1,528,448	+		MIT1002_01377	0.41	+0.0
1,528,488	-		MIT1002_01377	0.49	-0.7
1,528,488	-		MIT1002_01377	0.49	+1.7
1,528,505	+		MIT1002_01377	0.52	-0.5
1,528,562	+		MIT1002_01377	0.63	+1.4
1,528,582	-		MIT1002_01377	0.67	-1.3
1,528,755	-				-0.2
1,528,755	-				+0.8