Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01358

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,501,436	+				+0.5
1,501,558	+				-0.2
1,501,609	-				+0.0
1,501,609	-				+0.6
1,501,672	+				-2.8
1,501,682	+				+0.5
1,501,689	+				-0.3
1,502,051	-		MIT1002_01357	0.64	-2.1
1,502,053	+		MIT1002_01357	0.64	+1.0
1,502,072	+		MIT1002_01357	0.68	-2.1
1,502,090	-		MIT1002_01357	0.72	-0.7
1,502,257	+				+0.0
1,502,336	+				-4.0
1,502,336	+				+1.3
1,502,336	+				+0.6
1,502,344	-				-0.9
1,502,397	-		MIT1002_01358	0.13	-2.1
1,502,453	+		MIT1002_01358	0.26	+0.2
1,502,593	+		MIT1002_01358	0.60	+0.1
1,502,615	-		MIT1002_01358	0.65	-0.5
1,502,739	+				-0.7
1,502,755	+				+1.5
1,502,761	+				+1.9
1,502,784	-				+2.1
1,502,785	+				-0.2
1,502,803	+				-0.2
1,502,821	-				-0.3
1,502,943	+				+0.3
1,502,951	-				+1.5
1,503,062	-				+0.5
1,503,095	-				-1.1
1,503,095	-				-1.1
1,503,358	+		MIT1002_01359	0.16	-0.1
1,503,430	-		MIT1002_01359	0.19	+0.5
1,503,496	-		MIT1002_01359	0.21	-2.5
1,503,557	-		MIT1002_01359	0.23	-0.0
1,503,595	-		MIT1002_01359	0.24	+1.7
1,503,634	-		MIT1002_01359	0.25	-1.8
1,503,689	-		MIT1002_01359	0.27	-0.7
1,503,689	-		MIT1002_01359	0.27	+2.0
1,503,691	+		MIT1002_01359	0.27	-1.1
1,503,691	+		MIT1002_01359	0.27	-0.3
1,503,698	+		MIT1002_01359	0.27	+1.0
1,503,699	-		MIT1002_01359	0.27	+1.2