Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01306

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,453,245	+		MIT1002_01305	0.58	+1.8
1,453,294	+		MIT1002_01305	0.61	+0.6
1,453,303	-		MIT1002_01305	0.61	-0.8
1,453,339	+		MIT1002_01305	0.63	-0.4
1,453,339	+		MIT1002_01305	0.63	+0.3
1,453,339	+		MIT1002_01305	0.63	+1.6
1,453,339	+		MIT1002_01305	0.63	-1.1
1,453,339	+		MIT1002_01305	0.63	-1.7
1,453,339	+		MIT1002_01305	0.63	-1.0
1,453,347	+		MIT1002_01305	0.64	+0.1
1,453,347	-		MIT1002_01305	0.64	-0.2
1,453,347	-		MIT1002_01305	0.64	+0.6
1,453,347	-		MIT1002_01305	0.64	+0.5
1,453,347	-		MIT1002_01305	0.64	-0.9
1,453,347	-		MIT1002_01305	0.64	-0.7
1,453,347	-		MIT1002_01305	0.64	-0.2
1,453,347	-		MIT1002_01305	0.64	+0.1
1,453,347	-		MIT1002_01305	0.64	-0.6
1,453,347	-		MIT1002_01305	0.64	+0.6
1,453,347	-		MIT1002_01305	0.64	+1.0
1,453,347	-		MIT1002_01305	0.64	+1.4
1,453,347	-		MIT1002_01305	0.64	+1.9
1,453,352	-		MIT1002_01305	0.64	+0.5
1,453,461	+		MIT1002_01305	0.70	+1.0
1,453,510	+		MIT1002_01305	0.73	+1.2
1,453,647	-		MIT1002_01305	0.80	-1.0
1,453,708	+		MIT1002_01305	0.84	+0.5
1,453,708	+		MIT1002_01305	0.84	-2.6
1,453,775	-		MIT1002_01305	0.87	+0.3
1,453,783	-		MIT1002_01305	0.88	+2.3
1,453,788	+		MIT1002_01305	0.88	-0.1
1,453,788	+		MIT1002_01305	0.88	-0.2
1,453,788	+		MIT1002_01305	0.88	-2.4
1,453,796	-		MIT1002_01305	0.89	+0.1
1,453,796	-		MIT1002_01305	0.89	-2.7
1,453,809	-		MIT1002_01305	0.89	+2.3
1,453,839	+				-0.1
1,453,870	+				-1.6
1,453,878	-				-1.4
1,453,938	+				+0.5
1,453,946	-				-2.2
1,454,135	-				-0.6
1,454,138	+				+0.4
1,454,228	-				+0.4
1,454,285	+		MIT1002_01306	0.13	-0.1
1,454,298	+		MIT1002_01306	0.15	-1.2
1,454,306	-		MIT1002_01306	0.16	+0.5
1,454,306	-		MIT1002_01306	0.16	+1.0
1,454,394	+		MIT1002_01306	0.29	-0.8
1,454,396	+		MIT1002_01306	0.30	+1.7
1,454,396	+		MIT1002_01306	0.30	-0.8
1,454,410	+		MIT1002_01306	0.32	-1.8
1,454,464	+		MIT1002_01306	0.40	+0.1
1,454,548	+		MIT1002_01306	0.52	+2.5
1,454,569	+		MIT1002_01306	0.55	+1.2
1,454,576	-		MIT1002_01306	0.56	+0.4
1,454,650	+		MIT1002_01306	0.67	+0.1
1,454,658	-		MIT1002_01306	0.69	-0.5
1,454,660	+		MIT1002_01306	0.69	-1.6
1,454,668	-		MIT1002_01306	0.70	+0.9
1,454,734	-		MIT1002_01306	0.80	-1.7
1,454,780	-		MIT1002_01306	0.87	+0.2
1,454,825	+				-1.0
1,454,832	+				+1.4
1,454,846	+				-0.7
1,454,847	+				-0.7
1,454,847	+				+0.1
1,454,847	+				+0.2
1,454,847	+				-2.8
1,454,847	+				+0.0
1,454,855	-				+1.0
1,454,855	-				+0.6
1,454,855	-				+0.7
1,454,855	-				+1.0
1,454,855	-				-1.6
1,454,892	+				+1.0
1,454,926	-				-1.7
1,454,933	-				-0.3
1,454,959	-		MIT1002_01307	0.13	-0.8
1,455,008	+		MIT1002_01307	0.23	+0.0
1,455,044	-		MIT1002_01307	0.30	+0.9
1,455,055	+		MIT1002_01307	0.32	-0.5
1,455,072	+		MIT1002_01307	0.36	-0.1
1,455,119	+		MIT1002_01307	0.45	-0.5
1,455,126	+		MIT1002_01307	0.47	-0.0
1,455,126	+		MIT1002_01307	0.47	+0.1
1,455,127	-		MIT1002_01307	0.47	+0.1
1,455,132	-		MIT1002_01307	0.48	-0.3
1,455,141	-		MIT1002_01307	0.50	+0.3
1,455,193	+		MIT1002_01307	0.60	-0.2
1,455,201	-		MIT1002_01307	0.62	-2.4
1,455,201	-		MIT1002_01307	0.62	-0.0
1,455,201	-		MIT1002_01307	0.62	-0.8
1,455,206	+		MIT1002_01307	0.63	-0.5
1,455,206	+		MIT1002_01307	0.63	-0.5
1,455,206	+		MIT1002_01307	0.63	-0.8
1,455,214	-		MIT1002_01307	0.64	+0.2
1,455,214	-		MIT1002_01307	0.64	+1.5
1,455,214	-		MIT1002_01307	0.64	-0.4
1,455,214	-		MIT1002_01307	0.64	-0.4
1,455,477	+				-0.7
1,455,485	-				+0.7
1,455,512	+				-2.9
1,455,520	-				-0.3
1,455,576	+				-0.3
1,455,588	+				+1.6