Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01298

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,439,016	+		MIT1002_01297	0.71	+1.5
1,439,065	+		MIT1002_01297	0.73	+0.5
1,439,065	+		MIT1002_01297	0.73	+0.4
1,439,081	+		MIT1002_01297	0.74	+0.7
1,439,098	+		MIT1002_01297	0.75	-0.3
1,439,098	+		MIT1002_01297	0.75	+0.5
1,439,108	-		MIT1002_01297	0.75	+0.0
1,439,278	+		MIT1002_01297	0.84	+1.5
1,439,286	-		MIT1002_01297	0.84	+0.7
1,439,322	+		MIT1002_01297	0.86	+1.9
1,439,327	+		MIT1002_01297	0.86	-0.4
1,439,335	-		MIT1002_01297	0.86	-0.4
1,439,340	-		MIT1002_01297	0.87	+2.0
1,439,405	+		MIT1002_01297	0.90	+0.0
1,439,428	+				+0.6
1,439,440	-				+1.0
1,439,441	-				-0.6
1,439,443	+				+1.3
1,439,448	+				-0.5
1,439,457	+				-0.3
1,439,472	+				+1.8
1,439,570	-				-0.5
1,439,580	-				+0.9
1,439,637	+				-0.5
1,439,641	-				-0.5
1,439,681	-				+1.3
1,439,708	-				-1.3
1,439,708	-				+1.3
1,439,748	+				+0.7
1,439,780	+				+1.6
1,439,839	-				-2.5
1,439,843	-				+1.3
1,439,861	-				+1.4
1,439,900	+				+0.0
1,439,916	+				-1.9
1,439,924	-				-0.2
1,439,946	+				-0.8
1,439,949	-				-2.2
1,439,966	-				+0.4
1,439,982	-				+1.6
1,440,023	+				-1.8
1,440,125	+				+1.1
1,440,149	+				-0.9
1,440,222	+				+0.9
1,440,240	-				+0.5
1,440,240	-				-1.0
1,440,331	+				-0.3
1,440,331	+				-0.5
1,440,339	-				+0.5
1,440,339	-				-0.3
1,440,339	-				+2.8
1,440,349	-		MIT1002_01298	0.10	+1.5
1,440,390	-		MIT1002_01298	0.11	-0.5
1,440,437	+		MIT1002_01298	0.13	+0.2
1,440,450	+		MIT1002_01298	0.13	-2.4
1,440,629	+		MIT1002_01298	0.18	+2.1
1,440,752	-		MIT1002_01298	0.21	+1.6
1,440,752	-		MIT1002_01298	0.21	+1.0
1,440,816	+		MIT1002_01298	0.23	+2.9
1,440,942	-		MIT1002_01298	0.26	+0.8
1,441,016	-		MIT1002_01298	0.28	-1.3
1,441,073	+		MIT1002_01298	0.30	-0.1
1,441,073	+		MIT1002_01298	0.30	-1.0
1,441,081	-		MIT1002_01298	0.30	+1.9
1,441,119	-		MIT1002_01298	0.31	-1.5
1,441,231	+		MIT1002_01298	0.34	+1.3
1,441,242	+		MIT1002_01298	0.34	+1.4
1,441,284	-		MIT1002_01298	0.35	-1.7
1,441,444	-		MIT1002_01298	0.40	-1.2
1,441,477	+		MIT1002_01298	0.41	-0.7
1,441,635	-		MIT1002_01298	0.45	+0.2
1,441,760	-		MIT1002_01298	0.48	+1.7
1,441,773	-		MIT1002_01298	0.48	-0.3
1,441,787	+		MIT1002_01298	0.49	-1.0
1,441,795	-		MIT1002_01298	0.49	-0.7
1,441,936	+		MIT1002_01298	0.53	+0.7
1,441,960	+		MIT1002_01298	0.54	-1.0
1,442,042	-		MIT1002_01298	0.56	-1.6
1,442,115	-		MIT1002_01298	0.58	-1.1
1,442,151	+		MIT1002_01298	0.59	-1.3
1,442,159	-		MIT1002_01298	0.59	-1.8
1,442,199	+		MIT1002_01298	0.60	-1.5
1,442,211	+		MIT1002_01298	0.60	-0.3
1,442,211	+		MIT1002_01298	0.60	-0.2
1,442,322	+		MIT1002_01298	0.63	-1.1
1,442,380	+		MIT1002_01298	0.65	-0.3
1,442,388	-		MIT1002_01298	0.65	-0.9
1,442,543	-		MIT1002_01298	0.69	+0.7
1,442,660	+		MIT1002_01298	0.72	+0.7
1,442,670	+		MIT1002_01298	0.73	-0.4
1,442,733	-		MIT1002_01298	0.74	-1.1
1,442,787	-		MIT1002_01298	0.76	+0.2
1,442,792	-		MIT1002_01298	0.76	-2.0
1,442,806	+		MIT1002_01298	0.76	-1.1
1,442,812	-		MIT1002_01298	0.76	-1.1
1,442,812	-		MIT1002_01298	0.76	+0.5
1,442,824	-		MIT1002_01298	0.77	-1.2
1,442,854	-		MIT1002_01298	0.78	-1.1
1,442,854	-		MIT1002_01298	0.78	-0.7
1,442,866	+		MIT1002_01298	0.78	+0.5
1,442,874	-		MIT1002_01298	0.78	+0.2
1,442,916	+		MIT1002_01298	0.79	+2.9
1,443,055	+		MIT1002_01298	0.83	-1.3
1,443,146	+		MIT1002_01298	0.85	-2.2
1,443,232	-		MIT1002_01298	0.88	-1.9
1,443,265	+		MIT1002_01298	0.89	-1.2
1,443,282	+		MIT1002_01298	0.89	-1.8
1,443,290	-		MIT1002_01298	0.89	-0.4
1,443,416	-				-0.3
1,443,516	+				-1.2
1,443,516	+				-1.6
1,443,524	-				+0.7
1,443,524	-				+1.5
1,443,602	-				-1.7
1,443,614	+				+0.1
1,443,614	+				+1.0
1,443,614	+				-0.9
1,443,614	+				+1.7
1,443,622	-				+0.0
1,443,649	+				-1.8
1,443,657	-				-1.6
1,443,670	+				+2.5
1,443,678	-				-0.1
1,443,696	+				-0.3
1,443,703	+				-1.4
1,443,703	+				+2.4
1,443,704	-				-1.3
1,444,010	-		MIT1002_01299	0.51	-1.4
1,444,066	-		MIT1002_01299	0.60	+1.0
1,444,175	+		MIT1002_01299	0.77	+0.6
1,444,294	-				-0.5
1,444,294	-				+1.2
1,444,294	-				+0.5
1,444,336	-				+0.7
1,444,439	-				+0.5
1,444,439	-				+1.2
1,444,474	-		MIT1002_01300	0.13	+0.8