Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01089

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,196,700	+		MIT1002_01088	0.34	-0.4
1,196,714	+		MIT1002_01088	0.35	-0.2
1,196,714	+		MIT1002_01088	0.35	-0.1
1,196,722	-		MIT1002_01088	0.36	+1.9
1,196,722	-		MIT1002_01088	0.36	-1.1
1,196,722	-		MIT1002_01088	0.36	+2.7
1,196,732	-		MIT1002_01088	0.37	+0.6
1,196,923	+		MIT1002_01088	0.51	+1.4
1,196,931	-		MIT1002_01088	0.52	+0.3
1,196,933	+		MIT1002_01088	0.52	-0.6
1,196,941	-		MIT1002_01088	0.52	+0.9
1,196,988	+		MIT1002_01088	0.56	-0.1
1,197,029	-		MIT1002_01088	0.59	-1.0
1,197,062	-		MIT1002_01088	0.61	-1.4
1,197,158	-		MIT1002_01088	0.69	-1.1
1,197,161	-		MIT1002_01088	0.69	+0.0
1,197,190	+		MIT1002_01088	0.71	+0.2
1,197,263	+		MIT1002_01088	0.76	-1.1
1,197,271	-		MIT1002_01088	0.77	-1.3
1,197,332	-		MIT1002_01088	0.82	+1.5
1,197,434	+		MIT1002_01088	0.89	+0.1
1,197,500	+				+0.5
1,197,519	-				-0.2
1,197,552	+				-2.7
1,197,552	+				-2.1
1,197,552	+				+1.5
1,197,552	+				-2.5
1,197,560	-				-0.6
1,197,560	-				+0.4
1,197,560	-				+1.3
1,197,583	+				-1.3
1,197,583	+				-0.6
1,197,586	-				-0.2
1,197,586	-				-0.5
1,197,734	+		MIT1002_01089	0.19	-0.3
1,197,742	-		MIT1002_01089	0.21	+2.1
1,197,764	+		MIT1002_01089	0.26	-0.7
1,197,764	+		MIT1002_01089	0.26	-0.4
1,197,764	+		MIT1002_01089	0.26	-0.0
1,197,764	+		MIT1002_01089	0.26	+1.0
1,197,764	+		MIT1002_01089	0.26	-0.2
1,197,764	+		MIT1002_01089	0.26	+0.4
1,197,764	+		MIT1002_01089	0.26	+0.1
1,197,764	+		MIT1002_01089	0.26	-2.0
1,197,764	+		MIT1002_01089	0.26	-1.9
1,197,764	+		MIT1002_01089	0.26	-1.8
1,197,772	-		MIT1002_01089	0.28	-2.2
1,197,772	-		MIT1002_01089	0.28	+0.7
1,197,981	-		MIT1002_01089	0.74	+0.6
1,198,033	-		MIT1002_01089	0.86	-0.1
1,198,035	+		MIT1002_01089	0.86	+0.3
1,198,110	-				-0.6
1,198,121	+				+1.4
1,198,232	-				-0.7
1,198,251	+				-0.5
1,198,577	-				-1.0
1,198,665	+				-0.5
1,198,695	+		MIT1002_01090	0.11	+1.6
1,198,787	+		MIT1002_01090	0.15	-0.9
1,198,787	+		MIT1002_01090	0.15	-0.1
1,198,795	-		MIT1002_01090	0.15	-0.8
1,198,795	-		MIT1002_01090	0.15	-0.4
1,198,801	+		MIT1002_01090	0.15	+0.1
1,198,847	-		MIT1002_01090	0.17	+1.3
1,198,851	+		MIT1002_01090	0.17	-1.4
1,198,854	-		MIT1002_01090	0.18	-0.7
1,198,877	+		MIT1002_01090	0.19	-0.7
1,198,880	-		MIT1002_01090	0.19	-0.7
1,198,885	-		MIT1002_01090	0.19	+0.3
1,198,885	-		MIT1002_01090	0.19	-2.0
1,198,927	-		MIT1002_01090	0.21	-2.1
1,199,044	-		MIT1002_01090	0.26	-2.4
1,199,065	+		MIT1002_01090	0.27	-1.3
1,199,073	-		MIT1002_01090	0.27	+1.1