Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00935

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
1,034,897	+				+3.0
1,034,905	-				-0.3
1,034,905	-				+0.9
1,035,024	+		MIT1002_00934	0.19	-0.2
1,035,123	-		MIT1002_00934	0.29	-0.7
1,035,275	+		MIT1002_00934	0.44	-2.7
1,035,300	-		MIT1002_00934	0.47	+0.7
1,035,309	+		MIT1002_00934	0.48	-0.2
1,035,326	-		MIT1002_00934	0.49	-3.0
1,035,387	-		MIT1002_00934	0.56	-0.1
1,035,397	-		MIT1002_00934	0.57	-0.0
1,035,443	-		MIT1002_00934	0.61	-0.5
1,035,443	-		MIT1002_00934	0.61	-2.2
1,035,455	-		MIT1002_00934	0.62	-0.9
1,035,472	-		MIT1002_00934	0.64	+2.1
1,035,474	+		MIT1002_00934	0.64	+0.2
1,035,474	+		MIT1002_00934	0.64	-0.0
1,035,529	-		MIT1002_00934	0.70	-0.3
1,035,532	+		MIT1002_00934	0.70	+0.9
1,035,547	+		MIT1002_00934	0.72	+0.6
1,035,582	+		MIT1002_00934	0.75	-0.5
1,035,588	-		MIT1002_00934	0.76	+0.6
1,035,590	-		MIT1002_00934	0.76	-0.0
1,035,598	-		MIT1002_00934	0.77	+0.4
1,035,634	-		MIT1002_00934	0.80	-0.4
1,035,639	-		MIT1002_00934	0.81	-1.2
1,035,641	-		MIT1002_00934	0.81	-0.7
1,035,644	+		MIT1002_00934	0.81	+0.5
1,035,653	-		MIT1002_00934	0.82	+0.1
1,035,738	+				+0.4
1,035,743	+				+0.2
1,035,766	+				-1.0
1,035,845	-				-1.0
1,035,887	+		MIT1002_00935	0.11	-0.3
1,035,907	+		MIT1002_00935	0.15	+1.0
1,035,944	+		MIT1002_00935	0.22	+0.2
1,036,044	+		MIT1002_00935	0.42	+1.2
1,036,077	+		MIT1002_00935	0.48	+1.3
1,036,085	+		MIT1002_00935	0.50	-1.9
1,036,163	+		MIT1002_00935	0.65	+1.3
1,036,194	+		MIT1002_00935	0.71	+2.6
1,036,246	-		MIT1002_00935	0.81	-0.1
1,036,250	+		MIT1002_00935	0.82	-0.9
1,036,250	+		MIT1002_00935	0.82	+1.4
1,036,282	-		MIT1002_00935	0.88	+0.2
1,036,342	+				+0.4
1,036,347	+				-0.9
1,036,357	-				+1.0
1,036,371	-				-0.1
1,036,383	+				-0.4
1,036,383	+				-1.6
1,036,416	+				-1.4
1,036,416	+				-0.6
1,036,416	+				+0.3
1,036,424	-				-1.1
1,036,424	-				+0.5
1,036,424	-				-1.0
1,036,424	-				-1.8
1,036,508	+				+0.6
1,036,516	-				-1.4
1,036,516	-				-1.4
1,036,545	+				-1.6
1,036,552	+				-1.0
1,036,583	-				+1.1
1,036,583	-				-0.4
1,036,583	-				+0.4
1,036,583	-				+1.2
1,036,633	+		MIT1002_00936	0.10	+1.6
1,036,645	+		MIT1002_00936	0.11	+1.2
1,036,653	-		MIT1002_00936	0.11	+0.3
1,036,653	-		MIT1002_00936	0.11	-1.3
1,036,653	-		MIT1002_00936	0.11	-0.1
1,036,672	-		MIT1002_00936	0.12	+1.7
1,036,679	-		MIT1002_00936	0.13	-1.3
1,036,701	-		MIT1002_00936	0.14	-0.4
1,036,727	+		MIT1002_00936	0.15	+1.1
1,036,735	+		MIT1002_00936	0.16	-1.3
1,036,787	-		MIT1002_00936	0.19	-1.7
1,036,800	-		MIT1002_00936	0.20	+2.4
1,036,804	-		MIT1002_00936	0.20	+0.1
1,036,865	-		MIT1002_00936	0.23	-1.2
1,036,903	-		MIT1002_00936	0.25	+1.3
1,036,977	+		MIT1002_00936	0.29	+0.1
1,036,982	+		MIT1002_00936	0.30	-0.9
1,037,037	-		MIT1002_00936	0.33	+3.2
1,037,061	+		MIT1002_00936	0.34	-1.4
1,037,073	+		MIT1002_00936	0.35	-1.5
1,037,073	+		MIT1002_00936	0.35	-0.4
1,037,163	-		MIT1002_00936	0.40	-2.8
1,037,183	+		MIT1002_00936	0.41	+0.9
1,037,183	+		MIT1002_00936	0.41	-0.6
1,037,191	-		MIT1002_00936	0.41	-1.4
1,037,191	-		MIT1002_00936	0.41	-0.1
1,037,191	-		MIT1002_00936	0.41	+4.1
1,037,201	-		MIT1002_00936	0.42	+0.6
1,037,201	-		MIT1002_00936	0.42	+1.1
1,037,209	+		MIT1002_00936	0.42	+0.2
1,037,209	-		MIT1002_00936	0.42	+0.8