Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00148

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 5
160,674	-		MIT1002_00146	0.66	-0.4
160,674	-		MIT1002_00146	0.66	-0.5
160,678	+		MIT1002_00146	0.68	-0.5
160,700	+		MIT1002_00146	0.75	+1.0
160,702	-		MIT1002_00146	0.75	-0.5
160,725	-		MIT1002_00146	0.82	+1.9
160,803	+				+1.1
160,828	+				+2.3
160,830	+				+0.1
160,832	+				+0.2
160,838	-				+3.5
160,954	-		MIT1002_00147	0.10	+0.9
161,093	+		MIT1002_00147	0.31	-0.5
161,093	+		MIT1002_00147	0.31	-1.6
161,101	-		MIT1002_00147	0.32	-1.3
161,146	-		MIT1002_00147	0.39	-0.0
161,154	+		MIT1002_00147	0.40	-2.3
161,220	+		MIT1002_00147	0.50	-0.5
161,220	+		MIT1002_00147	0.50	-1.0
161,346	+		MIT1002_00147	0.69	+0.0
161,354	-		MIT1002_00147	0.70	+1.6
161,453	+		MIT1002_00147	0.85	-0.3
161,479	-		MIT1002_00147	0.89	-1.0
161,509	+				-1.8
161,509	+				+0.9
161,509	+				+0.2
161,509	-				+1.0
161,556	-				-0.8
161,556	-				-0.3
161,578	+				-2.2
161,586	-				-0.7
161,636	+				-0.9
161,675	+				+0.5
161,737	+				-0.2
161,739	+				-1.1
161,745	-				-0.5
161,800	-				+0.4
161,823	+				-0.2
161,831	-		MIT1002_00148	0.10	-0.8
161,833	+		MIT1002_00148	0.10	+1.4
161,988	-		MIT1002_00148	0.19	-0.1
162,026	-		MIT1002_00148	0.21	-0.4
162,150	-		MIT1002_00148	0.28	-0.7
162,167	+		MIT1002_00148	0.29	+0.2
162,167	+		MIT1002_00148	0.29	+0.8
162,175	-		MIT1002_00148	0.29	-1.5
162,182	-		MIT1002_00148	0.29	+0.0
162,201	+		MIT1002_00148	0.30	-0.3
162,256	-		MIT1002_00148	0.33	+1.1
162,291	-		MIT1002_00148	0.35	-0.8
162,327	+		MIT1002_00148	0.37	-0.2
162,327	+		MIT1002_00148	0.37	-0.5
162,327	+		MIT1002_00148	0.37	+0.8
162,404	+		MIT1002_00148	0.41	-1.5
162,434	-		MIT1002_00148	0.43	-1.9
162,450	+		MIT1002_00148	0.44	+0.7
162,482	-		MIT1002_00148	0.46	-0.5
162,490	-		MIT1002_00148	0.46	-0.2
162,507	+		MIT1002_00148	0.47	-0.7
162,507	+		MIT1002_00148	0.47	+0.8
162,507	+		MIT1002_00148	0.47	-1.5
162,519	+		MIT1002_00148	0.48	-1.1
162,536	+		MIT1002_00148	0.49	+0.8
162,569	-		MIT1002_00148	0.50	-1.3
162,637	-		MIT1002_00148	0.54	-1.2
162,659	-		MIT1002_00148	0.55	+0.2
162,693	+		MIT1002_00148	0.57	-0.1
162,793	+		MIT1002_00148	0.63	-2.3
162,793	+		MIT1002_00148	0.63	-2.8
162,801	-		MIT1002_00148	0.63	+0.2
162,840	-		MIT1002_00148	0.65	-1.8
162,854	+		MIT1002_00148	0.66	+0.8
162,862	+		MIT1002_00148	0.66	-0.6
162,869	+		MIT1002_00148	0.67	-1.9
162,870	-		MIT1002_00148	0.67	+0.7
162,877	-		MIT1002_00148	0.67	+2.1
162,908	+		MIT1002_00148	0.69	-0.6
162,973	+		MIT1002_00148	0.72	-0.9
162,973	+		MIT1002_00148	0.72	+0.3
163,052	+		MIT1002_00148	0.77	+0.0
163,087	-		MIT1002_00148	0.79	-0.4
163,087	-		MIT1002_00148	0.79	-0.4
163,098	+		MIT1002_00148	0.79	+1.0
163,108	-		MIT1002_00148	0.80	+0.2
163,202	+		MIT1002_00148	0.85	-0.5
163,209	-		MIT1002_00148	0.85	-2.6
163,209	-		MIT1002_00148	0.85	-1.3
163,219	-		MIT1002_00148	0.86	+0.6
163,219	-		MIT1002_00148	0.86	-0.4
163,219	-		MIT1002_00148	0.86	-0.7
163,229	-		MIT1002_00148	0.86	-1.2
163,305	+				+0.7
163,453	+				+1.6
163,556	+				-0.5
163,556	+				-0.4
163,556	+				+0.5
163,561	+				-0.9
163,564	-				+1.9
163,569	+				+1.3
163,847	+		MIT1002_00149	0.30	+0.0
163,924	+		MIT1002_00149	0.45	+0.1
163,956	-		MIT1002_00149	0.51	+1.7
163,978	+		MIT1002_00149	0.55	+1.3
163,995	+		MIT1002_00149	0.58	+2.0
163,995	+		MIT1002_00149	0.58	+1.3
163,995	+		MIT1002_00149	0.58	-1.3
163,995	+		MIT1002_00149	0.58	-1.4
163,995	+		MIT1002_00149	0.58	+0.0
164,003	-		MIT1002_00149	0.60	+0.3
164,003	-		MIT1002_00149	0.60	+0.0
164,062	+		MIT1002_00149	0.72	-0.8
164,062	+		MIT1002_00149	0.72	-0.7
164,062	+		MIT1002_00149	0.72	-0.5
164,070	-		MIT1002_00149	0.73	-0.6
164,070	-		MIT1002_00149	0.73	-0.3
164,080	-		MIT1002_00149	0.75	+1.8
164,153	-		MIT1002_00149	0.89	-1.3
164,191	+				-0.1
164,220	-				+1.7
164,222	+				+0.9
164,249	-				+1.6
164,256	+				-0.8
164,264	-				-1.0
164,282	-				-2.9
164,381	-				-0.2
164,389	-				+0.3
164,390	+				-0.2
164,392	+				+0.3
164,401	-				-1.8