Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13300

Experiment: planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,931,442	-		LRK53_RS13290	0.30	-0.1
2,931,442	-		LRK53_RS13290	0.30	-0.5
2,931,442	-		LRK53_RS13290	0.30	-0.8
2,931,442	-		LRK53_RS13290	0.30	+1.3
2,931,442	-		LRK53_RS13290	0.30	+2.2
2,931,442	-		LRK53_RS13290	0.30	-1.5
2,931,442	-		LRK53_RS13290	0.30	+0.9
2,931,442	-		LRK53_RS13290	0.30	-0.2
2,931,442	-		LRK53_RS13290	0.30	-0.1
2,931,442	-		LRK53_RS13290	0.30	-0.7
2,931,490	+		LRK53_RS13290	0.53	-1.4
2,931,490	+		LRK53_RS13290	0.53	-0.1
2,931,535	+		LRK53_RS13290	0.75	-0.9
2,931,535	+		LRK53_RS13290	0.75	-1.3
2,931,535	+		LRK53_RS13290	0.75	-0.4
2,931,536	-		LRK53_RS13290	0.75	+0.0
2,931,536	-		LRK53_RS13290	0.75	-1.7
2,931,608	+				-1.2
2,931,608	+				+0.3
2,931,608	+				-0.4
2,931,609	-				-0.9
2,931,609	-				-0.6
2,931,652	+				+0.0
2,931,654	+				-1.3
2,931,654	+				-2.5
2,931,655	-				-0.4
2,931,655	-				-1.3
2,931,719	+		LRK53_RS13295	0.11	+1.1
2,931,719	+		LRK53_RS13295	0.11	-0.5
2,931,720	-		LRK53_RS13295	0.11	-3.9
2,931,741	+		LRK53_RS13295	0.18	-1.0
2,931,742	-		LRK53_RS13295	0.19	-1.7
2,931,742	-		LRK53_RS13295	0.19	-0.7
2,931,812	+		LRK53_RS13295	0.44	+1.8
2,931,812	+		LRK53_RS13295	0.44	-1.2
2,931,812	+		LRK53_RS13295	0.44	-0.3
2,931,812	+		LRK53_RS13295	0.44	-0.7
2,931,812	+		LRK53_RS13295	0.44	-0.3
2,931,812	+		LRK53_RS13295	0.44	-2.0
2,931,812	+		LRK53_RS13295	0.44	-1.1
2,931,812	+		LRK53_RS13295	0.44	+1.1
2,931,812	+		LRK53_RS13295	0.44	-0.3
2,931,812	+		LRK53_RS13295	0.44	+0.1
2,931,812	+		LRK53_RS13295	0.44	+0.1
2,931,812	+		LRK53_RS13295	0.44	+0.3
2,931,812	+		LRK53_RS13295	0.44	+0.1
2,931,812	+		LRK53_RS13295	0.44	-1.1
2,931,812	+		LRK53_RS13295	0.44	-0.3
2,931,812	+		LRK53_RS13295	0.44	-1.7
2,931,813	-		LRK53_RS13295	0.44	+1.8
2,931,813	-		LRK53_RS13295	0.44	-1.3
2,931,813	-		LRK53_RS13295	0.44	-1.0
2,931,813	-		LRK53_RS13295	0.44	+0.9
2,931,813	-		LRK53_RS13295	0.44	-2.3
2,931,813	-		LRK53_RS13295	0.44	-1.9
2,931,813	-		LRK53_RS13295	0.44	+1.4
2,931,814	+		LRK53_RS13295	0.44	-2.5
2,931,814	+		LRK53_RS13295	0.44	-2.3
2,931,814	+		LRK53_RS13295	0.44	+0.3
2,931,814	+		LRK53_RS13295	0.44	-0.1
2,931,814	+		LRK53_RS13295	0.44	-2.5
2,931,815	-		LRK53_RS13295	0.45	-1.3
2,931,815	-		LRK53_RS13295	0.45	-1.0
2,931,815	-		LRK53_RS13295	0.45	+0.8
2,931,869	+		LRK53_RS13295	0.64	-0.1
2,931,869	+		LRK53_RS13295	0.64	+0.7
2,931,869	+		LRK53_RS13295	0.64	-0.8
2,931,869	+		LRK53_RS13295	0.64	-3.6
2,931,870	-		LRK53_RS13295	0.64	+0.5
2,931,870	-		LRK53_RS13295	0.64	+1.9
2,931,870	-		LRK53_RS13295	0.64	-0.7
2,931,881	+		LRK53_RS13295	0.68	-0.9
2,931,907	-		LRK53_RS13295	0.77	-0.4
2,932,003	+				+1.1
2,932,003	+				+0.3
2,932,003	+				+0.0
2,932,003	+				-1.6
2,932,004	-				-1.8
2,932,004	-				-0.4
2,932,004	-				-0.9
2,932,004	-				+0.6
2,932,004	-				-0.4
2,932,004	-				-1.7
2,932,007	+				+1.3
2,932,007	+				-1.1
2,932,007	+				-0.1
2,932,007	+				-1.4
2,932,008	-				-1.8
2,932,008	-				-1.8
2,932,008	-				-1.0
2,932,008	-				-1.3
2,932,008	-				-0.1
2,932,070	+				-0.8
2,932,071	-				-1.4
2,932,071	-				-0.8
2,932,077	+				-0.7
2,932,078	-				-1.5
2,932,112	+				-1.5
2,932,113	-				-3.1
2,932,113	-				-0.3
2,932,122	+				+0.6
2,932,122	+				-1.6
2,932,122	+				-0.1
2,932,122	+				-2.8
2,932,123	-				-1.9
2,932,123	-				-0.8
2,932,123	-				-0.6
2,932,123	-				+0.4
2,932,123	-				+1.1
2,932,160	+				-0.9
2,932,160	+				-0.2
2,932,282	+				-0.6
2,932,282	+				-0.4
2,932,282	+				+0.3
2,932,282	+				-0.3
2,932,282	+				+0.2
2,932,282	+				+0.0
2,932,282	+				+0.5
2,932,282	+				-0.1
2,932,283	-				+0.5
2,932,283	-				-0.1
2,932,283	-				-1.0
2,932,283	-				-0.4
2,932,283	-				-0.7
2,932,283	-				-0.5
2,932,283	-				+0.6
2,932,283	-				-2.5
2,932,283	-				-0.6
2,932,294	+				+0.0
2,932,294	+				-1.0
2,932,294	+				-0.1
2,932,294	+				-0.9
2,932,294	+				+0.2
2,932,294	+				-2.3
2,932,294	+				-0.5
2,932,294	+				-0.6
2,932,294	+				-0.8
2,932,295	-				-0.3
2,932,295	-				-1.4
2,932,295	-				+1.9
2,932,295	-				+0.1
2,932,295	-				+1.6
2,932,295	-				+1.3
2,932,295	-				-0.9
2,932,295	-				+0.0
2,932,295	-				-0.7
2,932,303	+				-0.5
2,932,304	-				-1.2
2,932,304	-				-0.2
2,932,304	-				-2.9
2,932,304	-				+1.3
2,932,304	-				-0.9
2,932,313	+				+0.1
2,932,313	+				-0.0
2,932,313	+				-2.3
2,932,313	+				-0.6
2,932,314	-				-0.2
2,932,314	-				-0.4
2,932,314	-				-0.6
2,932,314	-				+1.0
2,932,314	-				-0.7
2,932,314	-				-0.1
2,932,361	+				-1.8
2,932,361	+				-0.1
2,932,362	-				+0.2
2,932,365	+				-1.3
2,932,365	+				-0.1
2,932,365	+				-1.3
2,932,365	+				+0.4
2,932,366	-				-0.7
2,932,366	-				-1.6
2,932,366	-				+1.9
2,932,366	-				-0.2
2,932,366	-				-1.1
2,932,366	-				-0.4
2,932,368	+				+0.7
2,932,379	+				-3.2
2,932,379	+				-0.9
2,932,379	+				-0.2
2,932,383	+				-0.9
2,932,384	-				-0.9
2,932,418	+				-0.1
2,932,418	+				-0.0
2,932,418	+				+0.2
2,932,418	+				-1.6
2,932,419	-				+0.0
2,932,419	-				-0.1
2,932,573	+		LRK53_RS13300	0.13	+1.0
2,932,573	+		LRK53_RS13300	0.13	-0.1
2,932,573	+		LRK53_RS13300	0.13	-0.7
2,932,573	+		LRK53_RS13300	0.13	+0.3
2,932,573	+		LRK53_RS13300	0.13	+0.1
2,932,573	+		LRK53_RS13300	0.13	-2.5
2,932,573	+		LRK53_RS13300	0.13	-0.4
2,932,573	+		LRK53_RS13300	0.13	-2.3
2,932,574	-		LRK53_RS13300	0.13	-3.0
2,932,574	-		LRK53_RS13300	0.13	+0.3
2,932,574	-		LRK53_RS13300	0.13	-1.6
2,932,574	-		LRK53_RS13300	0.13	-0.4
2,932,574	-		LRK53_RS13300	0.13	-1.4
2,932,574	-		LRK53_RS13300	0.13	-0.1
2,932,574	-		LRK53_RS13300	0.13	-0.1
2,932,574	-		LRK53_RS13300	0.13	-0.8
2,932,577	+		LRK53_RS13300	0.13	+0.0
2,932,577	+		LRK53_RS13300	0.13	+0.3
2,932,577	+		LRK53_RS13300	0.13	+0.1
2,932,577	+		LRK53_RS13300	0.13	-1.3
2,932,577	+		LRK53_RS13300	0.13	+0.0
2,932,577	+		LRK53_RS13300	0.13	-1.4
2,932,577	+		LRK53_RS13300	0.13	+0.7
2,932,577	+		LRK53_RS13300	0.13	+0.8
2,932,577	+		LRK53_RS13300	0.13	-0.1
2,932,578	-		LRK53_RS13300	0.13	-0.4
2,932,578	-		LRK53_RS13300	0.13	-1.4
2,932,578	-		LRK53_RS13300	0.13	-1.1
2,932,578	-		LRK53_RS13300	0.13	-2.2
2,932,797	+		LRK53_RS13300	0.35	-0.3
2,932,797	+		LRK53_RS13300	0.35	-0.2
2,932,797	+		LRK53_RS13300	0.35	-1.0
2,932,798	-		LRK53_RS13300	0.35	-0.5
2,932,859	+		LRK53_RS13300	0.41	+1.7
2,932,904	+		LRK53_RS13300	0.45	+0.1
2,932,904	+		LRK53_RS13300	0.45	+2.1
2,932,904	+		LRK53_RS13300	0.45	-0.1
2,932,904	+		LRK53_RS13300	0.45	-0.8
2,932,982	+		LRK53_RS13300	0.53	-0.5
2,932,982	+		LRK53_RS13300	0.53	-0.4
2,932,983	-		LRK53_RS13300	0.53	-0.9
2,932,983	-		LRK53_RS13300	0.53	+0.6
2,932,983	-		LRK53_RS13300	0.53	-1.1
2,932,983	-		LRK53_RS13300	0.53	+0.4
2,932,983	-		LRK53_RS13300	0.53	+0.1
2,933,242	+		LRK53_RS13300	0.78	+0.4
2,933,279	+		LRK53_RS13300	0.82	-0.3
2,933,279	+		LRK53_RS13300	0.82	-0.4
2,933,279	+		LRK53_RS13300	0.82	+0.2
2,933,279	+		LRK53_RS13300	0.82	-0.4
2,933,280	-		LRK53_RS13300	0.82	-0.6
2,933,280	-		LRK53_RS13300	0.82	-0.2
2,933,280	-		LRK53_RS13300	0.82	+0.7
2,933,280	-		LRK53_RS13300	0.82	+0.6
2,933,280	-		LRK53_RS13300	0.82	+0.6
2,933,457	-				+0.3
2,933,457	-				-2.2
2,933,468	+				-0.1
2,933,468	+				-2.0
2,933,468	+				+0.6
2,933,468	+				+0.6
2,933,468	+				-1.6
2,933,469	-				-1.6
2,933,469	-				-2.8
2,933,469	-				+0.8
2,933,493	+				-0.9
2,933,496	+				+0.6
2,933,497	-				-2.2
2,933,517	+				-1.2
2,933,517	+				-1.8
2,933,517	+				+0.1
2,933,518	-				+2.0
2,933,518	-				-1.4
2,933,564	+				-1.0
2,933,595	+		LRK53_RS13305	0.21	+0.1
2,933,595	+		LRK53_RS13305	0.21	+0.2
2,933,595	+		LRK53_RS13305	0.21	-0.3
2,933,595	+		LRK53_RS13305	0.21	-1.0
2,933,595	+		LRK53_RS13305	0.21	-0.9
2,933,596	-		LRK53_RS13305	0.21	+0.1
2,933,596	-		LRK53_RS13305	0.21	-3.1
2,933,669	-		LRK53_RS13305	0.57	-1.1
2,933,685	+		LRK53_RS13305	0.65	-0.9
2,933,685	+		LRK53_RS13305	0.65	-2.1
2,933,685	+		LRK53_RS13305	0.65	-0.6
2,933,685	+		LRK53_RS13305	0.65	-2.0
2,933,685	+		LRK53_RS13305	0.65	-1.1
2,933,685	+		LRK53_RS13305	0.65	-1.1
2,933,685	+		LRK53_RS13305	0.65	-1.6
2,933,685	+		LRK53_RS13305	0.65	-0.7
2,933,686	-		LRK53_RS13305	0.65	-0.3
2,933,686	-		LRK53_RS13305	0.65	-2.6
2,933,754	+				+1.5
2,933,755	-				+0.0
2,933,804	+				-1.7
2,933,805	-				+0.7
2,933,937	+				-1.9
2,933,937	+				-0.5
2,933,937	+				-1.6
2,933,937	+				+0.1
2,933,937	+				+0.8
2,933,938	-				-0.1
2,933,938	-				-0.4
2,933,938	-				-1.0
2,933,938	-				-0.6
2,933,964	+				-0.4
2,933,964	+				+0.4
2,933,964	+				+0.1
2,933,964	+				-1.4
2,933,964	+				-0.6
2,933,964	+				+0.4
2,933,964	+				+0.7
2,933,964	+				-0.8
2,933,964	+				-0.6
2,933,964	+				-0.4
2,933,964	+				-1.0
2,933,965	-				-0.3
2,933,965	-				-2.3
2,933,965	-				-1.7
2,933,965	-				-0.8
2,933,965	-				-0.5
2,933,965	-				-0.7
2,933,965	-				-1.2
2,933,967	+				+0.0
2,933,968	-				+1.7
2,933,968	-				-1.2
2,933,968	-				-2.5
2,934,054	+				-0.8
2,934,054	+				+0.1
2,934,055	-				+1.4
2,934,055	-				-0.3
2,934,055	-				-0.1
2,934,055	-				+1.9
2,934,058	+				+0.4
2,934,059	-				-1.9
2,934,059	-				-1.7
2,934,059	-				-0.9
2,934,078	+		LRK53_RS13310	0.11	-1.9
2,934,086	+		LRK53_RS13310	0.12	-2.3
2,934,086	+		LRK53_RS13310	0.12	-1.3
2,934,103	+		LRK53_RS13310	0.14	-1.0
2,934,104	-		LRK53_RS13310	0.14	-1.7
2,934,104	-		LRK53_RS13310	0.14	-1.1
2,934,104	-		LRK53_RS13310	0.14	-2.6
2,934,104	-		LRK53_RS13310	0.14	+0.6
2,934,119	+		LRK53_RS13310	0.15	-1.2
2,934,119	+		LRK53_RS13310	0.15	+1.2
2,934,119	+		LRK53_RS13310	0.15	-0.4
2,934,119	+		LRK53_RS13310	0.15	-0.5
2,934,120	-		LRK53_RS13310	0.15	+0.7
2,934,120	-		LRK53_RS13310	0.15	-1.1
2,934,120	-		LRK53_RS13310	0.15	-1.7
2,934,120	-		LRK53_RS13310	0.15	-0.7
2,934,120	-		LRK53_RS13310	0.15	-0.9
2,934,158	+		LRK53_RS13310	0.19	-0.2
2,934,158	+		LRK53_RS13310	0.19	-1.1
2,934,158	+		LRK53_RS13310	0.19	-1.3
2,934,159	-		LRK53_RS13310	0.19	-0.1
2,934,159	-		LRK53_RS13310	0.19	-1.7
2,934,159	-		LRK53_RS13310	0.19	-0.7
2,934,159	-		LRK53_RS13310	0.19	+0.2
2,934,159	-		LRK53_RS13310	0.19	-1.1
2,934,162	+		LRK53_RS13310	0.20	-0.4
2,934,162	+		LRK53_RS13310	0.20	-2.2
2,934,162	+		LRK53_RS13310	0.20	-0.1
2,934,163	-		LRK53_RS13310	0.20	+1.2
2,934,163	-		LRK53_RS13310	0.20	-0.7
2,934,163	-		LRK53_RS13310	0.20	-1.2
2,934,190	+		LRK53_RS13310	0.22	-1.3
2,934,190	+		LRK53_RS13310	0.22	-2.1
2,934,222	+		LRK53_RS13310	0.26	-0.5
2,934,222	+		LRK53_RS13310	0.26	+0.9
2,934,222	+		LRK53_RS13310	0.26	+3.2
2,934,222	+		LRK53_RS13310	0.26	-1.2
2,934,222	+		LRK53_RS13310	0.26	-0.0
2,934,222	+		LRK53_RS13310	0.26	-0.8
2,934,222	+		LRK53_RS13310	0.26	+0.9
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2,934,223	-		LRK53_RS13310	0.26	-0.9
2,934,223	-		LRK53_RS13310	0.26	-0.7
2,934,223	-		LRK53_RS13310	0.26	-1.5
2,934,223	-		LRK53_RS13310	0.26	-1.9
2,934,223	-		LRK53_RS13310	0.26	-0.3
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2,934,254	-		LRK53_RS13310	0.29	-1.0
2,934,294	+		LRK53_RS13310	0.33	-1.6
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2,934,356	+		LRK53_RS13310	0.39	-0.3
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2,934,356	+		LRK53_RS13310	0.39	+0.1
2,934,356	+		LRK53_RS13310	0.39	+0.7
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2,934,357	-		LRK53_RS13310	0.39	-1.3
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2,934,410	+		LRK53_RS13310	0.44	+0.6
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2,934,418	+		LRK53_RS13310	0.45	+0.6
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2,934,438	+		LRK53_RS13310	0.47	+0.1
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2,934,456	-		LRK53_RS13310	0.49	-0.4