Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12510

Experiment: planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,770,295	+		LRK53_RS12505	0.55	-0.0
2,770,295	+		LRK53_RS12505	0.55	-0.2
2,770,295	+		LRK53_RS12505	0.55	-1.7
2,770,295	+		LRK53_RS12505	0.55	-1.1
2,770,295	+		LRK53_RS12505	0.55	+0.7
2,770,295	+		LRK53_RS12505	0.55	+0.7
2,770,295	+		LRK53_RS12505	0.55	-1.5
2,770,295	+		LRK53_RS12505	0.55	-1.5
2,770,295	+		LRK53_RS12505	0.55	-1.7
2,770,295	+		LRK53_RS12505	0.55	-1.1
2,770,296	-		LRK53_RS12505	0.55	-1.0
2,770,296	-		LRK53_RS12505	0.55	-0.6
2,770,296	-		LRK53_RS12505	0.55	-0.3
2,770,296	-		LRK53_RS12505	0.55	-0.5
2,770,296	-		LRK53_RS12505	0.55	+0.8
2,770,296	-		LRK53_RS12505	0.55	-0.9
2,770,374	+		LRK53_RS12505	0.62	-1.7
2,770,423	+		LRK53_RS12505	0.66	-2.0
2,770,423	+		LRK53_RS12505	0.66	-2.1
2,770,423	+		LRK53_RS12505	0.66	-0.6
2,770,424	-		LRK53_RS12505	0.66	-0.9
2,770,427	+		LRK53_RS12505	0.67	+0.1
2,770,427	+		LRK53_RS12505	0.67	-0.6
2,770,427	+		LRK53_RS12505	0.67	+0.7
2,770,427	+		LRK53_RS12505	0.67	-0.9
2,770,427	+		LRK53_RS12505	0.67	-1.2
2,770,427	+		LRK53_RS12505	0.67	+0.8
2,770,427	+		LRK53_RS12505	0.67	-0.6
2,770,427	+		LRK53_RS12505	0.67	-1.0
2,770,427	+		LRK53_RS12505	0.67	+0.3
2,770,427	+		LRK53_RS12505	0.67	+0.9
2,770,428	-		LRK53_RS12505	0.67	+0.3
2,770,428	-		LRK53_RS12505	0.67	+0.7
2,770,428	-		LRK53_RS12505	0.67	-0.2
2,770,428	-		LRK53_RS12505	0.67	-0.3
2,770,428	-		LRK53_RS12505	0.67	-0.6
2,770,428	-		LRK53_RS12505	0.67	-0.5
2,770,428	-		LRK53_RS12505	0.67	-1.2
2,770,428	-		LRK53_RS12505	0.67	-0.0
2,770,428	-		LRK53_RS12505	0.67	+0.7
2,770,428	-		LRK53_RS12505	0.67	-0.5
2,770,503	+		LRK53_RS12505	0.74	+0.9
2,770,503	+		LRK53_RS12505	0.74	+0.2
2,770,503	+		LRK53_RS12505	0.74	-0.6
2,770,503	+		LRK53_RS12505	0.74	-0.8
2,770,503	+		LRK53_RS12505	0.74	-1.2
2,770,503	+		LRK53_RS12505	0.74	-2.2
2,770,503	+		LRK53_RS12505	0.74	-1.4
2,770,504	-		LRK53_RS12505	0.74	-1.9
2,770,504	-		LRK53_RS12505	0.74	+0.8
2,770,504	-		LRK53_RS12505	0.74	+0.9
2,770,504	-		LRK53_RS12505	0.74	+0.5
2,770,504	-		LRK53_RS12505	0.74	-0.9
2,770,504	-		LRK53_RS12505	0.74	-2.0
2,770,504	-		LRK53_RS12505	0.74	+0.6
2,770,504	-		LRK53_RS12505	0.74	-0.5
2,770,524	+		LRK53_RS12505	0.75	-0.2
2,770,524	+		LRK53_RS12505	0.75	-1.1
2,770,524	+		LRK53_RS12505	0.75	+0.1
2,770,525	-		LRK53_RS12505	0.76	+0.1
2,770,525	-		LRK53_RS12505	0.76	-2.3
2,770,525	-		LRK53_RS12505	0.76	-1.5
2,770,525	-		LRK53_RS12505	0.76	-1.1
2,770,525	-		LRK53_RS12505	0.76	-0.6
2,770,532	+		LRK53_RS12505	0.76	-0.7
2,770,532	+		LRK53_RS12505	0.76	+0.9
2,770,532	+		LRK53_RS12505	0.76	-0.3
2,770,532	+		LRK53_RS12505	0.76	-1.1
2,770,532	+		LRK53_RS12505	0.76	-0.7
2,770,532	+		LRK53_RS12505	0.76	-0.9
2,770,532	+		LRK53_RS12505	0.76	-1.0
2,770,532	+		LRK53_RS12505	0.76	-0.2
2,770,532	+		LRK53_RS12505	0.76	-0.1
2,770,532	+		LRK53_RS12505	0.76	+0.2
2,770,532	+		LRK53_RS12505	0.76	-0.1
2,770,532	+		LRK53_RS12505	0.76	-0.8
2,770,532	+		LRK53_RS12505	0.76	-0.8
2,770,533	-		LRK53_RS12505	0.76	-2.1
2,770,533	-		LRK53_RS12505	0.76	+0.5
2,770,533	-		LRK53_RS12505	0.76	-2.1
2,770,533	-		LRK53_RS12505	0.76	+0.5
2,770,533	-		LRK53_RS12505	0.76	-0.6
2,770,533	-		LRK53_RS12505	0.76	-1.7
2,770,533	-		LRK53_RS12505	0.76	-2.3
2,770,533	-		LRK53_RS12505	0.76	+0.5
2,770,753	+				+0.6
2,770,794	+				-0.2
2,770,794	+				-1.7
2,770,795	-				-1.2
2,770,795	-				-0.8
2,770,795	-				-1.3
2,771,031	+				-0.1
2,771,031	+				-1.7
2,771,031	+				-1.3
2,771,031	+				-0.1
2,771,031	+				-2.0
2,771,031	+				+1.7
2,771,031	+				-1.9
2,771,031	+				+0.1
2,771,031	+				-1.6
2,771,031	+				-0.5
2,771,031	+				-0.9
2,771,031	+				-3.0
2,771,031	+				-1.5
2,771,032	-				-0.6
2,771,032	-				-0.5
2,771,032	-				-2.3
2,771,032	-				-0.4
2,771,032	-				-1.0
2,771,032	-				+0.3
2,771,032	-				+0.2
2,771,063	+				+0.4
2,771,063	+				+0.2
2,771,063	+				-1.2
2,771,063	+				-1.0
2,771,064	-				-0.2
2,771,064	-				+0.5
2,771,187	-		LRK53_RS12510	0.29	-0.5
2,771,223	+		LRK53_RS12510	0.38	-0.6
2,771,224	-		LRK53_RS12510	0.38	-0.2
2,771,252	+		LRK53_RS12510	0.45	-1.5
2,771,277	+		LRK53_RS12510	0.51	-0.6
2,771,277	+		LRK53_RS12510	0.51	-0.2
2,771,277	+		LRK53_RS12510	0.51	+0.8
2,771,277	+		LRK53_RS12510	0.51	-0.2
2,771,277	+		LRK53_RS12510	0.51	+0.8
2,771,277	+		LRK53_RS12510	0.51	-1.0
2,771,277	+		LRK53_RS12510	0.51	-0.3
2,771,277	+		LRK53_RS12510	0.51	-0.3
2,771,277	+		LRK53_RS12510	0.51	+0.3
2,771,277	+		LRK53_RS12510	0.51	-0.3
2,771,277	+		LRK53_RS12510	0.51	+0.6
2,771,277	+		LRK53_RS12510	0.51	-1.1
2,771,277	+		LRK53_RS12510	0.51	+0.1
2,771,278	-		LRK53_RS12510	0.51	+1.1
2,771,278	-		LRK53_RS12510	0.51	+2.2
2,771,278	-		LRK53_RS12510	0.51	-1.7
2,771,278	-		LRK53_RS12510	0.51	-0.6
2,771,278	-		LRK53_RS12510	0.51	-1.1
2,771,278	-		LRK53_RS12510	0.51	-0.5
2,771,278	-		LRK53_RS12510	0.51	-0.3
2,771,278	-		LRK53_RS12510	0.51	-2.5
2,771,278	-		LRK53_RS12510	0.51	-0.1
2,771,278	-		LRK53_RS12510	0.51	+0.3
2,771,278	-		LRK53_RS12510	0.51	-2.2
2,771,278	-		LRK53_RS12510	0.51	-0.1
2,771,278	-		LRK53_RS12510	0.51	-0.5
2,771,283	+		LRK53_RS12510	0.53	-0.3
2,771,283	+		LRK53_RS12510	0.53	-1.4
2,771,283	+		LRK53_RS12510	0.53	-1.0
2,771,283	+		LRK53_RS12510	0.53	-0.2
2,771,283	+		LRK53_RS12510	0.53	-0.1
2,771,283	+		LRK53_RS12510	0.53	-0.2
2,771,283	+		LRK53_RS12510	0.53	-0.7
2,771,283	+		LRK53_RS12510	0.53	-1.6
2,771,283	+		LRK53_RS12510	0.53	-1.0
2,771,283	+		LRK53_RS12510	0.53	-2.0
2,771,283	+		LRK53_RS12510	0.53	+2.9
2,771,283	+		LRK53_RS12510	0.53	-1.9
2,771,283	+		LRK53_RS12510	0.53	+0.5
2,771,283	+		LRK53_RS12510	0.53	-0.7
2,771,283	+		LRK53_RS12510	0.53	-1.6
2,771,283	+		LRK53_RS12510	0.53	-0.7
2,771,283	+		LRK53_RS12510	0.53	-0.3
2,771,283	+		LRK53_RS12510	0.53	-2.0
2,771,283	+		LRK53_RS12510	0.53	-0.4
2,771,283	+		LRK53_RS12510	0.53	-0.9
2,771,283	+		LRK53_RS12510	0.53	-2.4
2,771,283	+		LRK53_RS12510	0.53	-0.5
2,771,283	+		LRK53_RS12510	0.53	-1.1
2,771,284	-		LRK53_RS12510	0.53	-0.0
2,771,284	-		LRK53_RS12510	0.53	-0.8
2,771,284	-		LRK53_RS12510	0.53	-1.0
2,771,284	-		LRK53_RS12510	0.53	+1.3
2,771,284	-		LRK53_RS12510	0.53	+0.2
2,771,284	-		LRK53_RS12510	0.53	-0.1
2,771,284	-		LRK53_RS12510	0.53	-0.5
2,771,284	-		LRK53_RS12510	0.53	+0.6
2,771,284	-		LRK53_RS12510	0.53	-0.0
2,771,284	-		LRK53_RS12510	0.53	+0.0
2,771,284	-		LRK53_RS12510	0.53	-1.3
2,771,284	-		LRK53_RS12510	0.53	-3.2
2,771,284	-		LRK53_RS12510	0.53	-1.3
2,771,284	-		LRK53_RS12510	0.53	-0.5
2,771,284	-		LRK53_RS12510	0.53	-0.0
2,771,284	-		LRK53_RS12510	0.53	-0.7
2,771,284	-		LRK53_RS12510	0.53	-1.3
2,771,284	-		LRK53_RS12510	0.53	-1.7
2,771,284	-		LRK53_RS12510	0.53	-0.1
2,771,284	-		LRK53_RS12510	0.53	+0.3
2,771,284	-		LRK53_RS12510	0.53	-1.9
2,771,284	-		LRK53_RS12510	0.53	-0.8
2,771,284	-		LRK53_RS12510	0.53	-1.6
2,771,337	+		LRK53_RS12510	0.65	+1.8
2,771,337	+		LRK53_RS12510	0.65	-1.0
2,771,338	-		LRK53_RS12510	0.66	-1.8
2,771,338	-		LRK53_RS12510	0.66	-1.5
2,771,338	-		LRK53_RS12510	0.66	-1.9
2,771,338	-		LRK53_RS12510	0.66	-0.9
2,771,358	+		LRK53_RS12510	0.71	-1.4
2,771,358	+		LRK53_RS12510	0.71	-1.6
2,771,358	+		LRK53_RS12510	0.71	-0.7
2,771,358	+		LRK53_RS12510	0.71	+1.5
2,771,358	+		LRK53_RS12510	0.71	-1.4
2,771,359	-		LRK53_RS12510	0.71	+1.0
2,771,359	-		LRK53_RS12510	0.71	-0.5
2,771,359	-		LRK53_RS12510	0.71	+2.3
2,771,359	-		LRK53_RS12510	0.71	+0.6
2,771,386	+		LRK53_RS12510	0.77	-0.9
2,771,387	-		LRK53_RS12510	0.77	-0.2
2,771,478	+				+0.1
2,771,478	+				-1.2
2,771,479	-				-0.3
2,771,479	-				-1.5
2,771,479	-				+0.7
2,771,479	-				+1.4
2,771,508	+				-0.2
2,771,508	+				+0.0
2,771,508	+				-0.6
2,771,508	+				-0.0
2,771,553	+				-0.8
2,771,554	-				+0.3
2,771,554	-				-0.8
2,771,559	+				+0.1
2,771,582	+				+0.5
2,771,583	-				-2.6
2,771,604	+				-0.9
2,771,605	-				-1.7
2,771,605	-				-1.0
2,771,605	-				-1.2
2,771,614	+				-2.4
2,771,637	+		LRK53_RS12515	0.16	-0.5
2,771,637	+		LRK53_RS12515	0.16	-1.8
2,771,638	-		LRK53_RS12515	0.16	+0.2
2,771,638	-		LRK53_RS12515	0.16	-0.9
2,771,638	-		LRK53_RS12515	0.16	-1.3
2,771,638	-		LRK53_RS12515	0.16	-1.4
2,771,638	-		LRK53_RS12515	0.16	-0.6
2,771,638	-		LRK53_RS12515	0.16	-0.8
2,771,833	+		LRK53_RS12515	0.68	-2.5
2,771,833	+		LRK53_RS12515	0.68	+0.4
2,771,834	-		LRK53_RS12515	0.69	-0.5
2,771,834	-		LRK53_RS12515	0.69	+1.7
2,771,889	+		LRK53_RS12515	0.83	+1.1
2,771,889	+		LRK53_RS12515	0.83	-0.5
2,771,890	-		LRK53_RS12515	0.83	-0.1
2,771,890	-		LRK53_RS12515	0.83	-2.5
2,771,890	-		LRK53_RS12515	0.83	-1.1
2,771,905	+		LRK53_RS12515	0.87	-1.5
2,772,029	+				-1.2
2,772,029	+				-0.8
2,772,029	+				+0.8
2,772,030	-				-0.3
2,772,061	-				-0.5
2,772,061	-				-1.0
2,772,061	-				-1.3
2,772,061	-				+0.1
2,772,061	-				-0.9
2,772,064	+				-0.2
2,772,064	+				+0.1
2,772,064	+				-2.3
2,772,064	+				-1.6
2,772,064	+				-0.2
2,772,064	+				+0.0
2,772,064	+				-1.0
2,772,064	+				-2.4
2,772,064	+				+2.6
2,772,064	+				-0.4
2,772,064	+				+0.7
2,772,064	+				-2.1
2,772,064	+				-1.8
2,772,064	+				+0.0
2,772,064	+				-0.3
2,772,064	+				-0.3
2,772,064	+				-0.6
2,772,064	+				-1.0
2,772,064	+				-0.0
2,772,065	-				-0.9
2,772,065	-				-0.6
2,772,065	-				-1.3
2,772,065	-				-1.1
2,772,065	-				-3.0
2,772,065	-				-0.9
2,772,065	-				-0.1
2,772,065	-				-0.1
2,772,065	-				+1.4
2,772,065	-				-0.6
2,772,065	-				+0.2
2,772,065	-				+0.1
2,772,065	-				-2.2
2,772,065	-				-0.5
2,772,065	-				-1.2
2,772,065	-				-0.1
2,772,065	-				-1.5
2,772,065	-				+0.5
2,772,084	+				+0.5
2,772,084	+				-0.6
2,772,255	+				-0.1
2,772,255	+				+0.2
2,772,255	+				-1.8
2,772,256	-				-1.4
2,772,256	-				-0.5
2,772,378	+				+0.5
2,772,378	+				-1.5
2,772,378	+				-2.5
2,772,378	+				-0.1
2,772,378	+				-1.8
2,772,378	+				+0.3
2,772,378	+				-0.8
2,772,379	-				-2.1
2,772,379	-				+0.6
2,772,379	-				-1.3
2,772,379	-				-1.3
2,772,379	-				-0.6
2,772,379	-				-1.5
2,772,379	-				-0.3
2,772,379	-				-1.7
2,772,379	-				+0.3
2,772,379	-				-0.3
2,772,379	-				-0.8
2,772,429	+		LRK53_RS12520	0.11	-0.8
2,772,429	+		LRK53_RS12520	0.11	-0.4
2,772,429	+		LRK53_RS12520	0.11	-2.3
2,772,429	+		LRK53_RS12520	0.11	-1.6
2,772,429	+		LRK53_RS12520	0.11	-0.6
2,772,429	+		LRK53_RS12520	0.11	-0.2
2,772,429	+		LRK53_RS12520	0.11	-1.0
2,772,429	+		LRK53_RS12520	0.11	-0.8
2,772,429	+		LRK53_RS12520	0.11	-0.1
2,772,429	+		LRK53_RS12520	0.11	+0.2
2,772,429	+		LRK53_RS12520	0.11	-1.3
2,772,429	+		LRK53_RS12520	0.11	-0.9
2,772,429	+		LRK53_RS12520	0.11	+0.7
2,772,429	+		LRK53_RS12520	0.11	+0.3
2,772,430	-		LRK53_RS12520	0.11	+0.2
2,772,430	-		LRK53_RS12520	0.11	-1.8
2,772,430	-		LRK53_RS12520	0.11	-1.0
2,772,430	-		LRK53_RS12520	0.11	-0.4
2,772,430	-		LRK53_RS12520	0.11	-0.6
2,772,430	-		LRK53_RS12520	0.11	+1.0
2,772,430	-		LRK53_RS12520	0.11	+0.7
2,772,433	-		LRK53_RS12520	0.11	+1.2
2,772,433	-		LRK53_RS12520	0.11	+0.5