Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10020

Experiment: planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,242,729	+		LRK53_RS10015	0.23	+0.2
2,242,729	+		LRK53_RS10015	0.23	-1.4
2,242,730	-		LRK53_RS10015	0.23	+0.2
2,242,730	-		LRK53_RS10015	0.23	-0.1
2,242,730	-		LRK53_RS10015	0.23	+0.6
2,243,013	+		LRK53_RS10015	0.56	-1.6
2,243,013	+		LRK53_RS10015	0.56	-0.6
2,243,013	+		LRK53_RS10015	0.56	-2.5
2,243,013	+		LRK53_RS10015	0.56	-1.7
2,243,013	+		LRK53_RS10015	0.56	+0.9
2,243,013	+		LRK53_RS10015	0.56	-0.4
2,243,013	+		LRK53_RS10015	0.56	-0.0
2,243,013	+		LRK53_RS10015	0.56	-0.6
2,243,013	+		LRK53_RS10015	0.56	-1.0
2,243,013	+		LRK53_RS10015	0.56	-0.0
2,243,013	+		LRK53_RS10015	0.56	+0.8
2,243,013	+		LRK53_RS10015	0.56	+0.2
2,243,013	+		LRK53_RS10015	0.56	-0.9
2,243,013	+		LRK53_RS10015	0.56	+1.2
2,243,013	+		LRK53_RS10015	0.56	-0.3
2,243,013	+		LRK53_RS10015	0.56	-0.7
2,243,013	+		LRK53_RS10015	0.56	+0.4
2,243,013	+		LRK53_RS10015	0.56	-1.2
2,243,013	+		LRK53_RS10015	0.56	-1.5
2,243,014	-		LRK53_RS10015	0.56	+0.1
2,243,014	-		LRK53_RS10015	0.56	-0.2
2,243,014	-		LRK53_RS10015	0.56	+2.0
2,243,014	-		LRK53_RS10015	0.56	+1.0
2,243,014	-		LRK53_RS10015	0.56	+0.8
2,243,014	-		LRK53_RS10015	0.56	+1.2
2,243,014	-		LRK53_RS10015	0.56	+0.3
2,243,014	-		LRK53_RS10015	0.56	-1.7
2,243,014	-		LRK53_RS10015	0.56	-0.2
2,243,014	-		LRK53_RS10015	0.56	+0.5
2,243,014	-		LRK53_RS10015	0.56	-0.2
2,243,014	-		LRK53_RS10015	0.56	-0.7
2,243,014	-		LRK53_RS10015	0.56	-1.1
2,243,014	-		LRK53_RS10015	0.56	-1.7
2,243,014	-		LRK53_RS10015	0.56	-0.4
2,243,223	+		LRK53_RS10015	0.81	-2.3
2,243,223	+		LRK53_RS10015	0.81	-0.4
2,243,223	+		LRK53_RS10015	0.81	+1.2
2,243,223	+		LRK53_RS10015	0.81	-1.6
2,243,223	+		LRK53_RS10015	0.81	-0.8
2,243,224	-		LRK53_RS10015	0.81	-0.2
2,243,224	-		LRK53_RS10015	0.81	-1.5
2,243,224	-		LRK53_RS10015	0.81	-1.4
2,243,224	-		LRK53_RS10015	0.81	-0.1
2,243,224	-		LRK53_RS10015	0.81	-1.0
2,243,310	+				+0.6
2,243,358	+				-0.3
2,243,359	-				+0.4
2,243,359	-				-1.1
2,243,359	-				-0.9
2,243,359	-				-1.0
2,243,423	+				-1.8
2,243,499	+				-0.9
2,243,499	+				-2.2
2,243,559	+				+1.2
2,243,559	+				-0.2
2,243,559	+				-1.1
2,243,559	+				-0.2
2,243,559	+				-0.8
2,243,559	+				-1.1
2,243,559	+				-0.1
2,243,559	+				-0.6
2,243,560	-				+0.1
2,243,560	-				-1.7
2,243,586	+				-0.5
2,243,587	-				-0.3
2,243,680	+				-1.0
2,243,680	+				-1.1
2,243,680	+				+1.6
2,243,680	+				-2.5
2,243,680	+				-1.6
2,243,680	+				+0.2
2,243,680	+				-0.4
2,243,680	+				-0.6
2,243,680	+				+0.3
2,243,681	-				+0.5
2,243,681	-				-1.7
2,243,681	-				-0.4
2,243,681	-				-0.4
2,243,681	-				-1.1
2,243,681	-				-0.0
2,243,681	-				-0.3
2,243,681	-				-0.6
2,243,681	-				-0.6
2,243,681	-				-0.9
2,243,681	-				-0.9
2,243,681	-				+0.2
2,243,681	-				-0.3
2,243,681	-				-2.0
2,243,684	+				-0.5
2,243,684	+				-0.6
2,243,684	+				-0.6
2,243,684	+				-0.4
2,243,684	+				-0.9
2,243,684	+				-0.3
2,243,684	+				+0.8
2,243,684	+				-0.9
2,243,685	-				-1.1
2,243,685	-				-1.5
2,243,685	-				-1.5
2,243,685	-				-2.7
2,243,685	-				+0.6
2,243,685	-				-0.1
2,243,685	-				+0.6
2,243,685	-				+0.4
2,243,685	-				-0.8
2,243,834	+		LRK53_RS10020	0.25	-0.0
2,243,834	+		LRK53_RS10020	0.25	-0.2
2,243,835	-		LRK53_RS10020	0.25	+0.6
2,243,883	+		LRK53_RS10020	0.34	-0.7
2,243,883	+		LRK53_RS10020	0.34	+1.6
2,243,883	+		LRK53_RS10020	0.34	-1.6
2,243,883	+		LRK53_RS10020	0.34	-1.3
2,243,883	+		LRK53_RS10020	0.34	-1.2
2,243,883	+		LRK53_RS10020	0.34	-1.2
2,243,883	+		LRK53_RS10020	0.34	-1.8
2,243,883	+		LRK53_RS10020	0.34	-0.7
2,243,884	-		LRK53_RS10020	0.34	+2.6
2,243,884	-		LRK53_RS10020	0.34	+0.2
2,243,884	-		LRK53_RS10020	0.34	-0.2
2,243,884	-		LRK53_RS10020	0.34	+0.5
2,243,884	-		LRK53_RS10020	0.34	+0.6
2,243,884	-		LRK53_RS10020	0.34	+0.1
2,243,933	+		LRK53_RS10020	0.43	-0.4
2,243,933	+		LRK53_RS10020	0.43	-0.9
2,243,933	+		LRK53_RS10020	0.43	-0.2
2,243,933	+		LRK53_RS10020	0.43	-0.1
2,243,933	+		LRK53_RS10020	0.43	-0.8
2,243,933	+		LRK53_RS10020	0.43	-0.2
2,243,934	-		LRK53_RS10020	0.44	-0.1
2,243,934	-		LRK53_RS10020	0.44	+0.8
2,243,934	-		LRK53_RS10020	0.44	-1.8
2,243,934	-		LRK53_RS10020	0.44	-0.2
2,243,934	-		LRK53_RS10020	0.44	-1.7
2,243,975	+		LRK53_RS10020	0.51	-1.5
2,243,975	+		LRK53_RS10020	0.51	-0.3
2,243,976	-		LRK53_RS10020	0.51	-0.0
2,243,976	-		LRK53_RS10020	0.51	-2.0
2,243,978	+		LRK53_RS10020	0.52	-2.1
2,243,978	+		LRK53_RS10020	0.52	-0.4
2,243,978	+		LRK53_RS10020	0.52	-2.0
2,243,978	+		LRK53_RS10020	0.52	-0.9
2,243,978	+		LRK53_RS10020	0.52	-2.0
2,243,978	+		LRK53_RS10020	0.52	-1.2
2,243,978	+		LRK53_RS10020	0.52	-1.8
2,243,978	+		LRK53_RS10020	0.52	+0.3
2,243,978	+		LRK53_RS10020	0.52	-1.2
2,243,978	+		LRK53_RS10020	0.52	-0.2
2,243,979	-		LRK53_RS10020	0.52	-1.7
2,243,979	-		LRK53_RS10020	0.52	-0.6
2,243,979	-		LRK53_RS10020	0.52	+2.6
2,243,979	-		LRK53_RS10020	0.52	-0.0
2,244,121	+		LRK53_RS10020	0.78	-0.8
2,244,122	-		LRK53_RS10020	0.79	-2.3
2,244,232	+				-1.3
2,244,273	+				+1.6
2,244,273	+				-1.2
2,244,273	+				-0.8
2,244,274	-				-0.8
2,244,366	+				-0.5
2,244,367	-				+1.2
2,244,422	+				+0.3
2,244,422	+				+0.6
2,244,422	+				+0.4
2,244,422	+				+1.0
2,244,423	-				+0.6
2,244,423	-				-2.4
2,244,423	-				-0.0
2,244,423	-				+1.3
2,244,423	-				-2.4
2,244,423	-				-0.0
2,244,423	-				+2.0
2,244,433	+				-1.7
2,244,433	+				-0.5
2,244,433	+				-0.9
2,244,433	+				+0.1
2,244,433	+				-0.4
2,244,433	+				-0.4
2,244,433	+				-1.6
2,244,433	+				-1.7
2,244,433	+				-0.9
2,244,433	+				-1.3
2,244,433	+				-1.2
2,244,434	-				-0.4
2,244,434	-				+1.0
2,244,434	-				+0.6
2,244,434	-				-0.4
2,244,434	-				+2.3
2,244,434	-				-1.1
2,244,663	+		LRK53_RS10025	0.50	-1.6
2,244,664	-		LRK53_RS10025	0.50	-0.6
2,244,664	-		LRK53_RS10025	0.50	-0.8
2,244,747	+		LRK53_RS10025	0.70	+0.1
2,244,747	+		LRK53_RS10025	0.70	-1.1
2,244,747	+		LRK53_RS10025	0.70	+0.6
2,244,748	-		LRK53_RS10025	0.70	-0.5
2,244,748	-		LRK53_RS10025	0.70	-0.6
2,244,748	-		LRK53_RS10025	0.70	-1.0
2,244,748	-		LRK53_RS10025	0.70	-0.3
2,244,748	-		LRK53_RS10025	0.70	-0.5
2,244,748	-		LRK53_RS10025	0.70	-0.5
2,244,748	-		LRK53_RS10025	0.70	-1.8
2,244,748	-		LRK53_RS10025	0.70	-1.1
2,244,757	+		LRK53_RS10025	0.72	-0.8
2,244,757	+		LRK53_RS10025	0.72	-0.8
2,244,757	+		LRK53_RS10025	0.72	-0.2
2,244,757	+		LRK53_RS10025	0.72	-0.9
2,244,757	+		LRK53_RS10025	0.72	-1.5
2,244,757	+		LRK53_RS10025	0.72	-2.4
2,244,757	+		LRK53_RS10025	0.72	-1.3
2,244,757	+		LRK53_RS10025	0.72	-1.4
2,244,757	+		LRK53_RS10025	0.72	-1.0
2,244,757	+		LRK53_RS10025	0.72	+0.7
2,244,757	+		LRK53_RS10025	0.72	-1.4
2,244,758	-		LRK53_RS10025	0.72	+0.1
2,244,758	-		LRK53_RS10025	0.72	-1.4
2,244,758	-		LRK53_RS10025	0.72	+0.3
2,244,758	-		LRK53_RS10025	0.72	-0.4
2,244,758	-		LRK53_RS10025	0.72	+0.1
2,244,758	-		LRK53_RS10025	0.72	-1.4
2,244,795	+		LRK53_RS10025	0.81	+0.1
2,244,795	+		LRK53_RS10025	0.81	-0.8
2,244,795	+		LRK53_RS10025	0.81	+0.2
2,244,795	+		LRK53_RS10025	0.81	-1.3
2,244,795	+		LRK53_RS10025	0.81	+0.6
2,244,796	-		LRK53_RS10025	0.81	-1.0
2,244,796	-		LRK53_RS10025	0.81	-1.3
2,244,796	-		LRK53_RS10025	0.81	-0.8
2,244,796	-		LRK53_RS10025	0.81	-0.9
2,244,796	-		LRK53_RS10025	0.81	-0.4
2,244,796	-		LRK53_RS10025	0.81	-0.3
2,245,027	-		LRK53_RS10030	0.13	-0.0
2,245,099	-		LRK53_RS10030	0.17	-0.2
2,245,099	-		LRK53_RS10030	0.17	-0.0
2,245,153	+		LRK53_RS10030	0.21	-0.6
2,245,153	+		LRK53_RS10030	0.21	+1.3
2,245,154	-		LRK53_RS10030	0.21	-1.1
2,245,154	-		LRK53_RS10030	0.21	-0.6