Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08640

Experiment: planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,937,841	+		LRK53_RS08630	0.74	+0.7
1,937,841	+		LRK53_RS08630	0.74	-0.2
1,937,841	+		LRK53_RS08630	0.74	+0.3
1,937,842	-		LRK53_RS08630	0.74	-0.9
1,937,842	-		LRK53_RS08630	0.74	+1.3
1,937,842	-		LRK53_RS08630	0.74	-0.7
1,937,842	-		LRK53_RS08630	0.74	-0.3
1,937,946	+		LRK53_RS08630	0.80	-1.3
1,937,975	-		LRK53_RS08630	0.82	-1.2
1,938,115	+		LRK53_RS08630	0.89	-0.4
1,938,116	-		LRK53_RS08630	0.89	+0.3
1,938,116	-		LRK53_RS08630	0.89	-0.1
1,938,252	+				-1.1
1,938,253	-				-0.8
1,938,253	-				+0.7
1,938,312	+				-0.1
1,938,338	+				+1.4
1,938,339	-				-0.2
1,938,356	+				+0.1
1,938,357	-				-0.0
1,938,357	-				+0.7
1,938,357	-				+0.5
1,938,430	+				-0.9
1,938,431	-				-0.8
1,938,431	-				-1.2
1,938,431	-				-1.4
1,938,431	-				-1.9
1,938,463	+		LRK53_RS08635	0.12	+0.3
1,938,463	+		LRK53_RS08635	0.12	+0.4
1,938,463	+		LRK53_RS08635	0.12	+0.1
1,938,464	-		LRK53_RS08635	0.12	+0.0
1,938,464	-		LRK53_RS08635	0.12	+0.4
1,938,730	+				-0.7
1,938,730	+				-2.3
1,938,730	+				-1.3
1,938,731	-				+1.2
1,938,731	-				-1.1
1,938,731	-				-1.7
1,938,800	+				-1.3
1,938,801	-				-0.5
1,938,854	+				-0.6
1,938,855	-				-0.0
1,938,923	+				-0.4
1,938,924	-				+0.0
1,938,924	-				-0.7
1,938,929	+				+1.2
1,938,929	+				+1.4
1,938,929	+				+0.1
1,938,930	-				+0.0
1,938,930	-				-0.0
1,938,930	-				-0.9
1,939,036	+		LRK53_RS08640	0.11	-0.7
1,939,036	+		LRK53_RS08640	0.11	+0.9
1,939,244	+		LRK53_RS08640	0.18	-0.5
1,939,244	+		LRK53_RS08640	0.18	-1.0
1,939,244	+		LRK53_RS08640	0.18	+1.1
1,939,244	+		LRK53_RS08640	0.18	-1.7
1,939,245	-		LRK53_RS08640	0.18	-0.8
1,939,245	-		LRK53_RS08640	0.18	-2.0
1,939,245	-		LRK53_RS08640	0.18	-0.8
1,939,245	-		LRK53_RS08640	0.18	-0.4
1,939,245	-		LRK53_RS08640	0.18	+0.1
1,939,245	-		LRK53_RS08640	0.18	-0.1
1,939,298	+		LRK53_RS08640	0.19	-1.2
1,939,298	+		LRK53_RS08640	0.19	+1.1
1,939,299	-		LRK53_RS08640	0.19	-0.5
1,939,299	-		LRK53_RS08640	0.19	-1.3
1,939,319	+		LRK53_RS08640	0.20	+0.2
1,939,319	+		LRK53_RS08640	0.20	+0.2
1,939,319	+		LRK53_RS08640	0.20	-2.3
1,939,320	-		LRK53_RS08640	0.20	-0.7
1,939,320	-		LRK53_RS08640	0.20	-1.5
1,939,340	+		LRK53_RS08640	0.21	-0.7
1,939,340	+		LRK53_RS08640	0.21	-1.0
1,939,341	-		LRK53_RS08640	0.21	-2.3
1,939,430	+		LRK53_RS08640	0.24	+1.0
1,939,430	+		LRK53_RS08640	0.24	-0.3
1,939,471	+		LRK53_RS08640	0.25	-0.0
1,939,471	+		LRK53_RS08640	0.25	-1.8
1,939,471	+		LRK53_RS08640	0.25	-1.0
1,939,471	+		LRK53_RS08640	0.25	+0.3
1,939,472	-		LRK53_RS08640	0.25	+0.7
1,939,472	-		LRK53_RS08640	0.25	-0.1
1,939,472	-		LRK53_RS08640	0.25	-0.5
1,939,472	-		LRK53_RS08640	0.25	-1.2
1,939,472	-		LRK53_RS08640	0.25	-1.4
1,939,472	-		LRK53_RS08640	0.25	-2.0
1,939,472	-		LRK53_RS08640	0.25	-0.1
1,939,478	+		LRK53_RS08640	0.25	+0.7
1,939,478	+		LRK53_RS08640	0.25	-2.0
1,939,479	-		LRK53_RS08640	0.25	-1.7
1,939,479	-		LRK53_RS08640	0.25	-3.4
1,939,479	-		LRK53_RS08640	0.25	-0.4
1,939,479	-		LRK53_RS08640	0.25	-0.1
1,939,529	+		LRK53_RS08640	0.27	-1.0
1,939,529	+		LRK53_RS08640	0.27	-0.5
1,939,530	-		LRK53_RS08640	0.27	-1.0
1,939,530	-		LRK53_RS08640	0.27	-0.9
1,939,530	-		LRK53_RS08640	0.27	-1.0
1,939,530	-		LRK53_RS08640	0.27	-0.9
1,939,530	-		LRK53_RS08640	0.27	-0.5
1,939,741	+		LRK53_RS08640	0.34	-0.8
1,939,741	+		LRK53_RS08640	0.34	-1.2
1,939,741	+		LRK53_RS08640	0.34	-0.6
1,939,741	+		LRK53_RS08640	0.34	-0.1
1,939,741	+		LRK53_RS08640	0.34	+0.2
1,939,741	+		LRK53_RS08640	0.34	+0.3
1,939,741	+		LRK53_RS08640	0.34	-0.9
1,939,741	+		LRK53_RS08640	0.34	-0.9
1,939,741	+		LRK53_RS08640	0.34	-0.6
1,939,741	+		LRK53_RS08640	0.34	-0.0
1,939,742	-		LRK53_RS08640	0.34	-1.0
1,939,742	-		LRK53_RS08640	0.34	+0.7
1,939,742	-		LRK53_RS08640	0.34	+0.5
1,939,742	-		LRK53_RS08640	0.34	-1.1
1,939,742	-		LRK53_RS08640	0.34	-1.4
1,939,742	-		LRK53_RS08640	0.34	-0.9
1,939,742	-		LRK53_RS08640	0.34	+0.1
1,939,769	+		LRK53_RS08640	0.35	-0.6
1,939,769	+		LRK53_RS08640	0.35	+2.1
1,939,770	-		LRK53_RS08640	0.35	-0.4
1,939,770	-		LRK53_RS08640	0.35	-0.0
1,939,778	+		LRK53_RS08640	0.35	-1.1
1,939,778	+		LRK53_RS08640	0.35	-0.6
1,939,779	-		LRK53_RS08640	0.35	+1.1
1,939,779	-		LRK53_RS08640	0.35	-0.8
1,939,917	-		LRK53_RS08640	0.40	+0.1
1,939,946	+		LRK53_RS08640	0.41	-2.1
1,939,947	-		LRK53_RS08640	0.41	-0.8
1,939,976	+		LRK53_RS08640	0.42	-1.5
1,939,976	+		LRK53_RS08640	0.42	-1.8
1,939,976	+		LRK53_RS08640	0.42	-1.4
1,939,976	+		LRK53_RS08640	0.42	-0.3
1,939,976	+		LRK53_RS08640	0.42	-1.5
1,939,976	+		LRK53_RS08640	0.42	-0.7
1,939,976	+		LRK53_RS08640	0.42	-0.6
1,939,976	+		LRK53_RS08640	0.42	+1.0
1,939,976	+		LRK53_RS08640	0.42	+0.5
1,939,976	+		LRK53_RS08640	0.42	+0.8
1,939,976	+		LRK53_RS08640	0.42	-0.8
1,939,976	+		LRK53_RS08640	0.42	-1.7
1,939,977	-		LRK53_RS08640	0.42	-0.9
1,939,977	-		LRK53_RS08640	0.42	-0.5
1,939,977	-		LRK53_RS08640	0.42	-0.4
1,939,977	-		LRK53_RS08640	0.42	-2.0
1,939,977	-		LRK53_RS08640	0.42	-1.2
1,939,977	-		LRK53_RS08640	0.42	+1.1
1,939,977	-		LRK53_RS08640	0.42	-0.5
1,939,977	-		LRK53_RS08640	0.42	-1.3
1,939,997	+		LRK53_RS08640	0.43	-0.1
1,939,997	+		LRK53_RS08640	0.43	-0.5
1,939,997	+		LRK53_RS08640	0.43	-0.3
1,939,997	+		LRK53_RS08640	0.43	-0.5
1,939,997	+		LRK53_RS08640	0.43	-4.4
1,939,998	-		LRK53_RS08640	0.43	-1.2
1,940,042	+		LRK53_RS08640	0.44	-1.0
1,940,042	+		LRK53_RS08640	0.44	-0.9
1,940,042	+		LRK53_RS08640	0.44	-1.3
1,940,042	+		LRK53_RS08640	0.44	+0.6
1,940,042	+		LRK53_RS08640	0.44	-0.5
1,940,043	-		LRK53_RS08640	0.44	-0.5
1,940,043	-		LRK53_RS08640	0.44	-1.1
1,940,043	-		LRK53_RS08640	0.44	-0.4
1,940,043	-		LRK53_RS08640	0.44	-0.3
1,940,204	+		LRK53_RS08640	0.50	-1.8
1,940,204	+		LRK53_RS08640	0.50	-0.3
1,940,204	+		LRK53_RS08640	0.50	+1.1
1,940,204	+		LRK53_RS08640	0.50	+0.1
1,940,204	+		LRK53_RS08640	0.50	-1.5
1,940,204	+		LRK53_RS08640	0.50	-1.7
1,940,204	+		LRK53_RS08640	0.50	-1.3
1,940,204	+		LRK53_RS08640	0.50	-1.3
1,940,204	+		LRK53_RS08640	0.50	-0.7
1,940,205	-		LRK53_RS08640	0.50	+0.9
1,940,205	-		LRK53_RS08640	0.50	-1.4
1,940,205	-		LRK53_RS08640	0.50	+0.1
1,940,205	-		LRK53_RS08640	0.50	-1.8
1,940,205	-		LRK53_RS08640	0.50	-1.6
1,940,205	-		LRK53_RS08640	0.50	-0.8
1,940,205	-		LRK53_RS08640	0.50	+0.4
1,940,205	-		LRK53_RS08640	0.50	-0.5
1,940,205	-		LRK53_RS08640	0.50	-1.0
1,940,309	+		LRK53_RS08640	0.53	-0.8
1,940,309	+		LRK53_RS08640	0.53	-0.8
1,940,309	+		LRK53_RS08640	0.53	-1.0
1,940,309	+		LRK53_RS08640	0.53	+0.1
1,940,309	+		LRK53_RS08640	0.53	-1.5
1,940,310	-		LRK53_RS08640	0.53	-0.1
1,940,310	-		LRK53_RS08640	0.53	+0.7
1,940,310	-		LRK53_RS08640	0.53	-0.9
1,940,438	+		LRK53_RS08640	0.57	+0.2
1,940,438	+		LRK53_RS08640	0.57	-1.2
1,940,438	+		LRK53_RS08640	0.57	-1.3
1,940,438	+		LRK53_RS08640	0.57	-0.8
1,940,438	+		LRK53_RS08640	0.57	-0.5
1,940,438	+		LRK53_RS08640	0.57	-1.4
1,940,439	-		LRK53_RS08640	0.57	-1.5
1,940,439	-		LRK53_RS08640	0.57	-1.1
1,940,439	-		LRK53_RS08640	0.57	-2.4
1,940,439	-		LRK53_RS08640	0.57	-0.4
1,940,439	-		LRK53_RS08640	0.57	+0.4
1,940,489	+		LRK53_RS08640	0.59	-0.7
1,940,489	+		LRK53_RS08640	0.59	+0.2
1,940,489	+		LRK53_RS08640	0.59	+0.4
1,940,489	+		LRK53_RS08640	0.59	-1.0
1,940,489	+		LRK53_RS08640	0.59	-0.8
1,940,489	+		LRK53_RS08640	0.59	-0.3
1,940,489	+		LRK53_RS08640	0.59	-1.6
1,940,489	+		LRK53_RS08640	0.59	+0.1
1,940,490	-		LRK53_RS08640	0.59	-1.1
1,940,490	-		LRK53_RS08640	0.59	-2.1
1,940,490	-		LRK53_RS08640	0.59	-0.2
1,940,490	-		LRK53_RS08640	0.59	-0.6
1,940,490	-		LRK53_RS08640	0.59	-0.4
1,940,490	-		LRK53_RS08640	0.59	+0.2
1,940,490	-		LRK53_RS08640	0.59	-0.4
1,940,490	-		LRK53_RS08640	0.59	-1.1
1,940,490	-		LRK53_RS08640	0.59	+0.5
1,940,490	-		LRK53_RS08640	0.59	+0.4
1,940,490	-		LRK53_RS08640	0.59	-0.6
1,940,981	+		LRK53_RS08640	0.76	+0.5
1,940,981	+		LRK53_RS08640	0.76	+0.5
1,940,982	-		LRK53_RS08640	0.76	+0.1
1,940,982	-		LRK53_RS08640	0.76	-1.2
1,940,982	-		LRK53_RS08640	0.76	+2.3
1,940,982	-		LRK53_RS08640	0.76	-1.1
1,940,982	-		LRK53_RS08640	0.76	-1.1
1,940,982	-		LRK53_RS08640	0.76	-1.3
1,940,982	-		LRK53_RS08640	0.76	+0.1
1,940,982	-		LRK53_RS08640	0.76	-1.5
1,941,082	-		LRK53_RS08640	0.79	-0.4
1,941,104	+		LRK53_RS08640	0.80	+0.2
1,941,105	-		LRK53_RS08640	0.80	-2.0
1,941,105	-		LRK53_RS08640	0.80	-0.8
1,941,170	+		LRK53_RS08640	0.82	-0.7
1,941,170	+		LRK53_RS08640	0.82	-2.1
1,941,305	+		LRK53_RS08640	0.86	+0.3
1,941,356	+		LRK53_RS08640	0.88	+1.7
1,941,357	-		LRK53_RS08640	0.88	-1.1
1,941,401	+		LRK53_RS08640	0.90	-1.0
1,941,402	-		LRK53_RS08640	0.90	+0.3
1,941,402	-		LRK53_RS08640	0.90	+0.5
1,941,402	-		LRK53_RS08640	0.90	-2.3
1,941,402	-		LRK53_RS08640	0.90	-0.3
1,941,555	-				-0.8
1,941,555	-				-1.9
1,941,555	-				-2.0
1,941,555	-				-0.3
1,941,655	+				-0.5
1,941,655	+				-1.6
1,941,655	+				-0.7
1,941,655	+				-1.5
1,941,656	-				-0.2
1,941,656	-				-0.6
1,941,656	-				-0.3
1,941,656	-				-1.3
1,941,656	-				-1.6
1,941,808	+				-0.6
1,941,808	+				-0.3
1,941,808	+				-1.0
1,941,811	+				-1.5
1,941,811	+				-0.2
1,941,811	+				+2.2
1,941,811	+				+0.7
1,941,811	+				+0.7
1,941,811	+				-0.3
1,941,811	+				-1.4
1,941,811	+				+0.6
1,941,811	+				-1.0
1,941,812	-				-0.2
1,941,812	-				-1.0
1,941,812	-				-0.7
1,941,812	-				-0.5
1,941,812	-				+0.9
1,941,817	+				-0.8
1,941,817	+				-0.9
1,942,003	+				+0.7
1,942,003	+				-1.0
1,942,003	+				-0.7
1,942,003	+				-0.8
1,942,003	+				-1.3
1,942,003	+				+1.5
1,942,003	+				-0.2
1,942,004	-				-0.6
1,942,004	-				-0.9
1,942,006	+				+0.9
1,942,006	+				-1.0
1,942,006	+				+0.4
1,942,006	+				+1.7
1,942,007	-				-0.0
1,942,007	-				-0.3
1,942,007	-				-0.0
1,942,007	-				+0.2
1,942,007	-				-3.3
1,942,007	-				+0.7
1,942,007	-				-0.6
1,942,032	-				-2.3
1,942,047	+				+0.5
1,942,047	+				-0.5
1,942,048	-				+1.0
1,942,069	+		LRK53_RS08645	0.11	-0.9
1,942,120	+		LRK53_RS08645	0.18	+1.8
1,942,120	+		LRK53_RS08645	0.18	-1.7
1,942,120	+		LRK53_RS08645	0.18	-1.2
1,942,121	-		LRK53_RS08645	0.18	-0.4
1,942,134	+		LRK53_RS08645	0.20	-1.2
1,942,134	+		LRK53_RS08645	0.20	-1.5
1,942,135	-		LRK53_RS08645	0.21	+1.4
1,942,135	-		LRK53_RS08645	0.21	+1.7
1,942,135	-		LRK53_RS08645	0.21	-0.6
1,942,167	+		LRK53_RS08645	0.25	-0.3
1,942,167	+		LRK53_RS08645	0.25	-0.8
1,942,168	-		LRK53_RS08645	0.25	+0.2
1,942,168	-		LRK53_RS08645	0.25	-0.3
1,942,267	+		LRK53_RS08645	0.40	-1.3
1,942,268	-		LRK53_RS08645	0.41	-0.5
1,942,268	-		LRK53_RS08645	0.41	-1.0
1,942,286	-		LRK53_RS08645	0.43	-1.3
1,942,286	-		LRK53_RS08645	0.43	-0.5
1,942,328	-		LRK53_RS08645	0.50	-0.4
1,942,447	-		LRK53_RS08645	0.68	+0.1
1,942,489	+		LRK53_RS08645	0.74	-1.3
1,942,490	-		LRK53_RS08645	0.74	-1.3
1,942,490	-		LRK53_RS08645	0.74	-1.2
1,942,522	+		LRK53_RS08645	0.79	+0.1
1,942,522	+		LRK53_RS08645	0.79	-1.0
1,942,522	+		LRK53_RS08645	0.79	-0.6
1,942,523	-		LRK53_RS08645	0.79	-0.4
1,942,523	-		LRK53_RS08645	0.79	+1.7
1,942,523	-		LRK53_RS08645	0.79	-2.2
1,942,523	-		LRK53_RS08645	0.79	-0.8
1,942,523	-		LRK53_RS08645	0.79	+0.7
1,942,523	-		LRK53_RS08645	0.79	+0.1
1,942,523	-		LRK53_RS08645	0.79	-2.2
1,942,591	+		LRK53_RS08645	0.89	-1.4
1,942,591	+		LRK53_RS08645	0.89	-2.2
1,942,591	+		LRK53_RS08645	0.89	-1.7
1,942,592	-		LRK53_RS08645	0.89	-1.3
1,942,592	-		LRK53_RS08645	0.89	-0.8
1,942,645	+				-2.5
1,942,645	+				-0.9
1,942,645	+				-2.6
1,942,646	-				-0.7
1,942,646	-				-0.5
1,942,646	-				-1.0
1,942,672	-				-1.8