Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06545

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
5,462	+		MPMX19_06544	0.16	-0.8
5,462	+		MPMX19_06544	0.16	-1.6
5,462	+		MPMX19_06544	0.16	-1.8
5,462	+		MPMX19_06544	0.16	-0.2
5,463	-		MPMX19_06544	0.16	-1.6
5,463	-		MPMX19_06544	0.16	-1.5
5,463	-		MPMX19_06544	0.16	-1.5
5,463	-		MPMX19_06544	0.16	-0.5
5,463	-		MPMX19_06544	0.16	-0.5
5,510	+		MPMX19_06544	0.20	-0.9
5,510	+		MPMX19_06544	0.20	-1.0
5,510	+		MPMX19_06544	0.20	-0.9
5,510	+		MPMX19_06544	0.20	-0.8
5,510	+		MPMX19_06544	0.20	-2.5
5,510	+		MPMX19_06544	0.20	-0.3
5,510	+		MPMX19_06544	0.20	-2.2
5,510	+		MPMX19_06544	0.20	-1.5
5,511	-		MPMX19_06544	0.21	+0.1
5,511	-		MPMX19_06544	0.21	-2.0
5,615	+		MPMX19_06544	0.31	-0.3
5,615	+		MPMX19_06544	0.31	-0.7
5,615	+		MPMX19_06544	0.31	-2.0
5,615	+		MPMX19_06544	0.31	-1.9
5,615	+		MPMX19_06544	0.31	+0.0
5,615	+		MPMX19_06544	0.31	-0.5
5,615	+		MPMX19_06544	0.31	-1.0
5,615	+		MPMX19_06544	0.31	-0.3
5,615	+		MPMX19_06544	0.31	-0.8
5,615	+		MPMX19_06544	0.31	+1.4
5,615	+		MPMX19_06544	0.31	+0.2
5,615	+		MPMX19_06544	0.31	-0.2
5,616	-		MPMX19_06544	0.31	-1.8
5,616	-		MPMX19_06544	0.31	-1.2
5,616	-		MPMX19_06544	0.31	-0.9
5,616	-		MPMX19_06544	0.31	+0.8
5,616	-		MPMX19_06544	0.31	-1.5
5,616	-		MPMX19_06544	0.31	-0.6
5,616	-		MPMX19_06544	0.31	-1.6
5,616	-		MPMX19_06544	0.31	-1.0
5,648	+		MPMX19_06544	0.34	-1.0
5,648	+		MPMX19_06544	0.34	-0.0
5,648	+		MPMX19_06544	0.34	-1.5
5,648	+		MPMX19_06544	0.34	-1.6
5,648	+		MPMX19_06544	0.34	-1.2
5,648	+		MPMX19_06544	0.34	-2.0
5,648	+		MPMX19_06544	0.34	-0.2
5,648	+		MPMX19_06544	0.34	-1.0
5,648	+		MPMX19_06544	0.34	-1.0
5,648	+		MPMX19_06544	0.34	-2.5
5,648	+		MPMX19_06544	0.34	-0.8
5,648	+		MPMX19_06544	0.34	-0.6
5,649	-		MPMX19_06544	0.34	-1.0
5,649	-		MPMX19_06544	0.34	-2.5
5,649	-		MPMX19_06544	0.34	-0.8
5,649	-		MPMX19_06544	0.34	-2.6
5,649	-		MPMX19_06544	0.34	-0.3
5,649	-		MPMX19_06544	0.34	-2.0
5,649	-		MPMX19_06544	0.34	-2.6
5,649	-		MPMX19_06544	0.34	-1.3
5,649	-		MPMX19_06544	0.34	-1.2
5,649	-		MPMX19_06544	0.34	-2.1
5,649	-		MPMX19_06544	0.34	-1.0
5,649	-		MPMX19_06544	0.34	-1.3
5,649	-		MPMX19_06544	0.34	+1.5
5,649	-		MPMX19_06544	0.34	-1.3
5,649	-		MPMX19_06544	0.34	-2.5
5,649	-		MPMX19_06544	0.34	-0.2
5,649	-		MPMX19_06544	0.34	+0.3
5,649	-		MPMX19_06544	0.34	-1.5
5,744	+		MPMX19_06544	0.43	+0.5
5,744	+		MPMX19_06544	0.43	-1.5
5,744	+		MPMX19_06544	0.43	-0.5
5,744	+		MPMX19_06544	0.43	+0.7
5,744	+		MPMX19_06544	0.43	+0.5
5,744	+		MPMX19_06544	0.43	-1.0
5,744	+		MPMX19_06544	0.43	-2.4
5,744	+		MPMX19_06544	0.43	-0.5
5,744	+		MPMX19_06544	0.43	-1.7
5,744	+		MPMX19_06544	0.43	-2.0
5,745	-		MPMX19_06544	0.43	-1.0
5,745	-		MPMX19_06544	0.43	-1.6
5,745	-		MPMX19_06544	0.43	+0.4
5,745	-		MPMX19_06544	0.43	+1.2
5,745	-		MPMX19_06544	0.43	+0.7
5,745	-		MPMX19_06544	0.43	-0.4
5,745	-		MPMX19_06544	0.43	-0.1
6,152	+		MPMX19_06544	0.83	-1.6
6,152	+		MPMX19_06544	0.83	-0.2
6,152	+		MPMX19_06544	0.83	-1.0
6,152	+		MPMX19_06544	0.83	-2.2
6,152	+		MPMX19_06544	0.83	-0.6
6,152	+		MPMX19_06544	0.83	-0.4
6,152	+		MPMX19_06544	0.83	-2.2
6,152	+		MPMX19_06544	0.83	-0.2
6,152	+		MPMX19_06544	0.83	-1.8
6,152	+		MPMX19_06544	0.83	-1.3
6,152	+		MPMX19_06544	0.83	-0.4
6,153	-		MPMX19_06544	0.83	-1.5
6,153	-		MPMX19_06544	0.83	-0.0
6,153	-		MPMX19_06544	0.83	-0.2
6,153	-		MPMX19_06544	0.83	-1.2
6,153	-		MPMX19_06544	0.83	-1.5
6,153	-		MPMX19_06544	0.83	-1.2
6,153	-		MPMX19_06544	0.83	-0.9
6,153	-		MPMX19_06544	0.83	+0.1
6,153	-		MPMX19_06544	0.83	-0.9
6,153	-		MPMX19_06544	0.83	-1.0
6,170	+		MPMX19_06544	0.85	-0.9
6,170	+		MPMX19_06544	0.85	+0.3
6,170	+		MPMX19_06544	0.85	-2.4
6,170	+		MPMX19_06544	0.85	-1.2
6,170	+		MPMX19_06544	0.85	-2.8
6,170	+		MPMX19_06544	0.85	-0.9
6,170	+		MPMX19_06544	0.85	-0.3
6,171	-		MPMX19_06544	0.85	-0.8
6,171	-		MPMX19_06544	0.85	-0.6
6,171	-		MPMX19_06544	0.85	-1.1
6,171	-		MPMX19_06544	0.85	-0.6
6,171	-		MPMX19_06544	0.85	-1.7
6,171	-		MPMX19_06544	0.85	-3.0
6,171	-		MPMX19_06544	0.85	-2.3
6,171	-		MPMX19_06544	0.85	-1.3
6,171	-		MPMX19_06544	0.85	-1.5
6,212	+		MPMX19_06544	0.89	-3.4
6,212	+		MPMX19_06544	0.89	-1.9
6,212	+		MPMX19_06544	0.89	-2.0
6,213	-		MPMX19_06544	0.89	-2.0
6,213	-		MPMX19_06544	0.89	-0.7
6,213	-		MPMX19_06544	0.89	-1.5
6,213	-		MPMX19_06544	0.89	-1.5
6,254	+				-0.5
6,254	+				-1.6
6,255	-				-0.8
6,364	+				-0.7
6,365	-				+2.0
6,365	-				-1.5
6,538	+		MPMX19_06545	0.17	-0.5
6,538	+		MPMX19_06545	0.17	-0.9
6,538	+		MPMX19_06545	0.17	-0.8
6,538	+		MPMX19_06545	0.17	-0.6
6,538	+		MPMX19_06545	0.17	-1.0
6,538	+		MPMX19_06545	0.17	-0.0
6,538	+		MPMX19_06545	0.17	-2.1
6,538	+		MPMX19_06545	0.17	-0.1
6,539	-		MPMX19_06545	0.17	-1.0
6,539	-		MPMX19_06545	0.17	-0.9
6,539	-		MPMX19_06545	0.17	-1.4
6,539	-		MPMX19_06545	0.17	-3.2
6,539	-		MPMX19_06545	0.17	-1.6
6,539	-		MPMX19_06545	0.17	-2.5
6,751	+		MPMX19_06545	0.34	+0.2
6,751	+		MPMX19_06545	0.34	-1.3
6,751	+		MPMX19_06545	0.34	-1.2
6,751	+		MPMX19_06545	0.34	-1.9
6,751	+		MPMX19_06545	0.34	+0.1
6,751	+		MPMX19_06545	0.34	-0.9
6,751	+		MPMX19_06545	0.34	-0.1
6,751	+		MPMX19_06545	0.34	-0.1
6,751	+		MPMX19_06545	0.34	-1.0
6,751	+		MPMX19_06545	0.34	-0.7
6,752	-		MPMX19_06545	0.34	-1.2
6,752	-		MPMX19_06545	0.34	+0.3
6,752	-		MPMX19_06545	0.34	-2.4
6,752	-		MPMX19_06545	0.34	+0.4
6,752	-		MPMX19_06545	0.34	+1.1
6,752	-		MPMX19_06545	0.34	-0.8
6,752	-		MPMX19_06545	0.34	-1.5
7,108	+		MPMX19_06545	0.63	-1.3
7,108	+		MPMX19_06545	0.63	-0.6
7,108	+		MPMX19_06545	0.63	-1.3
7,108	+		MPMX19_06545	0.63	-2.5
7,108	+		MPMX19_06545	0.63	-2.0
7,108	+		MPMX19_06545	0.63	+0.5
7,108	+		MPMX19_06545	0.63	-1.5
7,108	+		MPMX19_06545	0.63	-0.5
7,108	+		MPMX19_06545	0.63	-1.0
7,108	+		MPMX19_06545	0.63	-0.8
7,108	+		MPMX19_06545	0.63	-1.3
7,108	+		MPMX19_06545	0.63	-1.5
7,108	+		MPMX19_06545	0.63	-0.5
7,109	-		MPMX19_06545	0.63	-1.6
7,109	-		MPMX19_06545	0.63	-2.3
7,109	-		MPMX19_06545	0.63	-0.9
7,109	-		MPMX19_06545	0.63	-1.5
7,109	-		MPMX19_06545	0.63	-2.3
7,109	-		MPMX19_06545	0.63	-1.3
7,109	-		MPMX19_06545	0.63	-2.4
7,109	-		MPMX19_06545	0.63	-0.8
7,109	-		MPMX19_06545	0.63	+0.2
7,109	-		MPMX19_06545	0.63	-2.5
7,109	-		MPMX19_06545	0.63	-1.5
7,109	-		MPMX19_06545	0.63	-1.0
7,109	-		MPMX19_06545	0.63	-1.2
7,109	-		MPMX19_06545	0.63	-1.6
7,109	-		MPMX19_06545	0.63	-1.2
7,111	+		MPMX19_06545	0.63	-2.5
7,111	+		MPMX19_06545	0.63	-2.1
7,111	+		MPMX19_06545	0.63	-0.0
7,111	+		MPMX19_06545	0.63	-1.8
7,111	+		MPMX19_06545	0.63	-1.8
7,111	+		MPMX19_06545	0.63	-0.6
7,111	+		MPMX19_06545	0.63	-1.6
7,111	+		MPMX19_06545	0.63	-2.2
7,111	+		MPMX19_06545	0.63	-1.8
7,111	+		MPMX19_06545	0.63	-2.3
7,111	+		MPMX19_06545	0.63	+0.7
7,111	+		MPMX19_06545	0.63	-0.3
7,111	+		MPMX19_06545	0.63	-0.0
7,111	+		MPMX19_06545	0.63	-0.9
7,111	+		MPMX19_06545	0.63	-2.5
7,111	+		MPMX19_06545	0.63	+0.2
7,111	+		MPMX19_06545	0.63	+0.4
7,111	+		MPMX19_06545	0.63	-1.3
7,111	+		MPMX19_06545	0.63	-0.3
7,111	+		MPMX19_06545	0.63	-0.5
7,111	+		MPMX19_06545	0.63	+0.3
7,111	+		MPMX19_06545	0.63	-0.8
7,111	+		MPMX19_06545	0.63	-0.5
7,111	+		MPMX19_06545	0.63	-1.2
7,111	+		MPMX19_06545	0.63	-2.0
7,111	+		MPMX19_06545	0.63	-1.9
7,111	+		MPMX19_06545	0.63	-1.7
7,111	+		MPMX19_06545	0.63	-2.2
7,111	+		MPMX19_06545	0.63	-1.3
7,112	-		MPMX19_06545	0.63	-1.2
7,112	-		MPMX19_06545	0.63	-1.5
7,112	-		MPMX19_06545	0.63	+1.1
7,112	-		MPMX19_06545	0.63	-1.3
7,112	-		MPMX19_06545	0.63	+0.1
7,112	-		MPMX19_06545	0.63	-1.9
7,112	-		MPMX19_06545	0.63	-1.4
7,112	-		MPMX19_06545	0.63	-2.2
7,112	-		MPMX19_06545	0.63	-0.8
7,112	-		MPMX19_06545	0.63	-1.6
7,112	-		MPMX19_06545	0.63	-1.0
7,112	-		MPMX19_06545	0.63	-1.5
7,112	-		MPMX19_06545	0.63	-3.6
7,112	-		MPMX19_06545	0.63	-2.3
7,112	-		MPMX19_06545	0.63	-1.9
7,112	-		MPMX19_06545	0.63	-1.3
7,112	-		MPMX19_06545	0.63	+0.2
7,112	-		MPMX19_06545	0.63	-1.8
7,112	-		MPMX19_06545	0.63	-0.8
7,112	-		MPMX19_06545	0.63	-1.6
7,112	-		MPMX19_06545	0.63	-1.2
7,112	-		MPMX19_06545	0.63	-1.4
7,112	-		MPMX19_06545	0.63	+0.4
7,112	-		MPMX19_06545	0.63	-1.8
7,112	-		MPMX19_06545	0.63	-2.2
7,112	-		MPMX19_06545	0.63	-1.9
7,112	-		MPMX19_06545	0.63	+0.2
7,112	-		MPMX19_06545	0.63	-1.8
7,112	-		MPMX19_06545	0.63	-1.5
7,112	-		MPMX19_06545	0.63	-2.5
7,112	-		MPMX19_06545	0.63	-2.6
7,112	-		MPMX19_06545	0.63	-2.2
7,112	-		MPMX19_06545	0.63	-2.5
7,112	-		MPMX19_06545	0.63	+0.7
7,112	-		MPMX19_06545	0.63	-1.1
7,112	-		MPMX19_06545	0.63	-1.9
7,231	+		MPMX19_06545	0.73	-0.7
7,231	+		MPMX19_06545	0.73	+0.1
7,231	+		MPMX19_06545	0.73	-2.0
7,231	+		MPMX19_06545	0.73	-0.9
7,231	+		MPMX19_06545	0.73	-1.0
7,231	+		MPMX19_06545	0.73	-0.7
7,231	+		MPMX19_06545	0.73	-0.5
7,231	+		MPMX19_06545	0.73	-1.2
7,232	-		MPMX19_06545	0.73	-1.5
7,232	-		MPMX19_06545	0.73	-2.2
7,232	-		MPMX19_06545	0.73	+1.1
7,232	-		MPMX19_06545	0.73	-1.5
7,232	-		MPMX19_06545	0.73	-1.7
7,232	-		MPMX19_06545	0.73	+0.3
7,232	-		MPMX19_06545	0.73	-0.7
7,232	-		MPMX19_06545	0.73	-1.0
7,405	+		MPMX19_06545	0.87	-2.4
7,405	+		MPMX19_06545	0.87	-1.5
7,405	+		MPMX19_06545	0.87	-0.5
7,405	+		MPMX19_06545	0.87	-1.0
7,405	+		MPMX19_06545	0.87	-1.7
7,405	+		MPMX19_06545	0.87	-2.5
7,405	+		MPMX19_06545	0.87	+0.3
7,405	+		MPMX19_06545	0.87	-0.3
7,405	+		MPMX19_06545	0.87	-1.8
7,405	+		MPMX19_06545	0.87	-1.0
7,405	+		MPMX19_06545	0.87	-1.9
7,405	+		MPMX19_06545	0.87	+0.5
7,405	+		MPMX19_06545	0.87	-0.6
7,405	+		MPMX19_06545	0.87	-1.5
7,405	+		MPMX19_06545	0.87	-0.5
7,405	+		MPMX19_06545	0.87	-1.3
7,405	+		MPMX19_06545	0.87	-1.7
7,405	+		MPMX19_06545	0.87	-2.3
7,405	+		MPMX19_06545	0.87	-0.1
7,405	+		MPMX19_06545	0.87	+0.2
7,405	+		MPMX19_06545	0.87	-1.3
7,405	+		MPMX19_06545	0.87	-0.4
7,405	+		MPMX19_06545	0.87	-1.0
7,405	+		MPMX19_06545	0.87	-0.1
7,405	+		MPMX19_06545	0.87	+0.3
7,405	+		MPMX19_06545	0.87	-1.3
7,405	+		MPMX19_06545	0.87	-1.0
7,405	+		MPMX19_06545	0.87	-1.9
7,405	+		MPMX19_06545	0.87	-2.0
7,405	+		MPMX19_06545	0.87	-2.3
7,405	+		MPMX19_06545	0.87	-2.9
7,405	+		MPMX19_06545	0.87	-1.9
7,405	+		MPMX19_06545	0.87	-0.8
7,405	+		MPMX19_06545	0.87	-1.4
7,405	+		MPMX19_06545	0.87	-0.0
7,405	+		MPMX19_06545	0.87	-1.4
7,405	+		MPMX19_06545	0.87	-1.1
7,405	+		MPMX19_06545	0.87	-2.0
7,405	+		MPMX19_06545	0.87	-0.4
7,405	+		MPMX19_06545	0.87	+0.8
7,405	+		MPMX19_06545	0.87	-2.5
7,405	+		MPMX19_06545	0.87	-1.2
7,405	+		MPMX19_06545	0.87	+0.2
7,405	+		MPMX19_06545	0.87	-1.6
7,406	+		MPMX19_06545	0.87	-1.2
7,406	-		MPMX19_06545	0.87	-0.6
7,406	-		MPMX19_06545	0.87	-1.4
7,406	-		MPMX19_06545	0.87	-1.9
7,406	-		MPMX19_06545	0.87	-1.0
7,406	-		MPMX19_06545	0.87	+0.5
7,406	-		MPMX19_06545	0.87	-0.0
7,406	-		MPMX19_06545	0.87	-0.8
7,406	-		MPMX19_06545	0.87	-0.1
7,406	-		MPMX19_06545	0.87	-0.6
7,406	-		MPMX19_06545	0.87	-2.6
7,406	-		MPMX19_06545	0.87	-0.3
7,406	-		MPMX19_06545	0.87	-0.6
7,406	-		MPMX19_06545	0.87	-0.3
7,406	-		MPMX19_06545	0.87	-0.0
7,406	-		MPMX19_06545	0.87	-1.8
7,406	-		MPMX19_06545	0.87	-0.6
7,406	-		MPMX19_06545	0.87	-1.4
7,406	-		MPMX19_06545	0.87	-0.5
7,406	-		MPMX19_06545	0.87	-1.6
7,406	-		MPMX19_06545	0.87	-0.5
7,406	-		MPMX19_06545	0.87	-1.1
7,406	-		MPMX19_06545	0.87	-0.2
7,406	-		MPMX19_06545	0.87	-1.9
7,406	-		MPMX19_06545	0.87	-1.0
7,406	-		MPMX19_06545	0.87	-1.7
7,406	-		MPMX19_06545	0.87	-0.6
7,406	-		MPMX19_06545	0.87	-0.3
7,406	-		MPMX19_06545	0.87	-1.2
7,406	-		MPMX19_06545	0.87	-0.8
7,406	-		MPMX19_06545	0.87	+0.2
7,406	-		MPMX19_06545	0.87	-1.5
7,406	-		MPMX19_06545	0.87	-2.5
7,406	-		MPMX19_06545	0.87	-1.9
7,406	-		MPMX19_06545	0.87	-1.0
7,406	-		MPMX19_06545	0.87	-2.4
7,406	-		MPMX19_06545	0.87	+0.5
7,406	-		MPMX19_06545	0.87	-0.9
7,406	-		MPMX19_06545	0.87	-0.6
7,406	-		MPMX19_06545	0.87	-2.3
7,406	-		MPMX19_06545	0.87	-1.0
7,406	-		MPMX19_06545	0.87	-0.8
7,406	-		MPMX19_06545	0.87	-1.4
7,406	-		MPMX19_06545	0.87	-0.5
7,406	-		MPMX19_06545	0.87	-2.9
7,406	-		MPMX19_06545	0.87	-1.5
7,407	+		MPMX19_06545	0.87	+0.0
7,407	+		MPMX19_06545	0.87	-2.7
7,407	+		MPMX19_06545	0.87	-1.7
7,407	+		MPMX19_06545	0.87	+0.4
7,407	+		MPMX19_06545	0.87	-1.0
7,407	+		MPMX19_06545	0.87	-0.0
7,407	+		MPMX19_06545	0.87	-0.7
7,407	+		MPMX19_06545	0.87	-1.6
7,408	-		MPMX19_06545	0.87	-1.9
7,408	-		MPMX19_06545	0.87	-0.9
7,408	-		MPMX19_06545	0.87	-1.5
7,408	-		MPMX19_06545	0.87	+0.1
7,429	+		MPMX19_06545	0.88	-1.0
7,429	+		MPMX19_06545	0.88	-1.0
7,429	+		MPMX19_06545	0.88	-1.1
7,430	-		MPMX19_06545	0.89	+1.0
7,430	-		MPMX19_06545	0.89	-1.5
7,430	-		MPMX19_06545	0.89	-0.1
7,430	-		MPMX19_06545	0.89	-0.6
7,444	+		MPMX19_06545	0.90	-0.2
7,480	+				-0.8
7,480	+				-0.2
7,480	+				+1.1
7,480	+				-1.6
7,480	+				-1.0
7,480	+				+0.1
7,480	+				+0.8
7,480	+				-0.7
7,480	+				-1.3
7,480	+				+1.1
7,480	+				-0.9
7,480	+				+0.4
7,480	+				-2.5
7,480	+				-1.9
7,481	-				-1.6
7,481	-				-1.0
7,481	-				-0.4
7,481	-				-1.2
7,481	-				-1.2
7,481	-				-0.9
7,481	-				-0.9
7,481	-				+1.5
7,713	+				+1.0
7,713	+				-0.2
7,713	+				+0.4
7,713	+				+0.5
7,713	+				-0.2
7,713	+				+0.1
7,713	+				+0.1
7,713	+				-1.3
7,713	+				-0.5
7,713	+				+0.3
7,713	+				+0.5
7,713	+				-0.5
7,713	+				+0.5
7,713	+				-0.5
7,713	+				-0.1
7,713	+				-0.4
7,713	+				-0.4
7,713	+				-0.7
7,713	+				+1.0
7,713	+				-1.9
7,713	+				-0.9
7,713	+				-1.2
7,713	+				-1.3
7,714	-				-2.4
7,714	-				-1.6
7,719	+				-0.3
7,719	+				-0.7
7,719	+				-0.5
7,719	+				-0.5
7,719	+				-0.4
7,720	-				-1.5
7,791	-				+0.4
8,062	+		MPMX19_06546	0.14	-0.8
8,330	+		MPMX19_06546	0.31	-0.8
8,331	-		MPMX19_06546	0.31	-2.0
8,555	+		MPMX19_06546	0.46	-1.2
8,555	+		MPMX19_06546	0.46	-1.8