Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04301

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
661,250	+		MPMX19_04300	0.57	+0.5
661,250	+		MPMX19_04300	0.57	+0.7
661,250	+		MPMX19_04300	0.57	+0.8
661,250	+		MPMX19_04300	0.57	+1.0
661,250	+		MPMX19_04300	0.57	+0.1
661,250	+		MPMX19_04300	0.57	+1.3
661,251	-		MPMX19_04300	0.57	-2.2
661,251	-		MPMX19_04300	0.57	-2.0
661,251	-		MPMX19_04300	0.57	+0.2
661,251	-		MPMX19_04300	0.57	+0.2
661,251	-		MPMX19_04300	0.57	-2.2
661,251	-		MPMX19_04300	0.57	+1.0
661,251	-		MPMX19_04300	0.57	-1.7
661,466	+		MPMX19_04300	0.70	-1.2
661,466	+		MPMX19_04300	0.70	-0.2
661,466	+		MPMX19_04300	0.70	+0.2
661,467	-		MPMX19_04300	0.70	-1.5
661,478	+		MPMX19_04300	0.70	+1.4
661,478	+		MPMX19_04300	0.70	-1.0
661,478	+		MPMX19_04300	0.70	-0.9
661,478	+		MPMX19_04300	0.70	-0.8
661,478	+		MPMX19_04300	0.70	-0.5
661,478	+		MPMX19_04300	0.70	+0.6
661,478	+		MPMX19_04300	0.70	+0.9
661,478	+		MPMX19_04300	0.70	+0.7
661,478	+		MPMX19_04300	0.70	-0.5
661,478	+		MPMX19_04300	0.70	+0.3
661,478	+		MPMX19_04300	0.70	+0.1
661,478	+		MPMX19_04300	0.70	+0.1
661,479	-		MPMX19_04300	0.70	-0.3
661,479	-		MPMX19_04300	0.70	+0.3
661,479	-		MPMX19_04300	0.70	-0.2
661,479	-		MPMX19_04300	0.70	+1.7
661,479	-		MPMX19_04300	0.70	+1.2
661,479	-		MPMX19_04300	0.70	-1.2
661,479	-		MPMX19_04300	0.70	-2.7
661,479	-		MPMX19_04300	0.70	-1.8
661,479	-		MPMX19_04300	0.70	-0.8
661,479	-		MPMX19_04300	0.70	+0.4
661,559	+		MPMX19_04300	0.75	-0.5
661,559	+		MPMX19_04300	0.75	-0.3
661,559	+		MPMX19_04300	0.75	-0.3
661,559	+		MPMX19_04300	0.75	-0.5
661,559	+		MPMX19_04300	0.75	-0.9
661,560	-		MPMX19_04300	0.75	+0.8
661,560	-		MPMX19_04300	0.75	-0.4
661,560	-		MPMX19_04300	0.75	+0.0
661,560	-		MPMX19_04300	0.75	-0.1
661,560	-		MPMX19_04300	0.75	-0.7
661,560	-		MPMX19_04300	0.75	+0.5
661,575	-		MPMX19_04300	0.76	-0.3
661,575	-		MPMX19_04300	0.76	-0.3
661,640	+		MPMX19_04300	0.79	-1.3
661,640	+		MPMX19_04300	0.79	+0.2
661,640	+		MPMX19_04300	0.79	-0.7
661,640	+		MPMX19_04300	0.79	-0.2
661,640	+		MPMX19_04300	0.79	-0.2
661,640	+		MPMX19_04300	0.79	-1.5
661,640	+		MPMX19_04300	0.79	-2.6
661,641	-		MPMX19_04300	0.80	-0.3
661,641	-		MPMX19_04300	0.80	+0.4
661,641	-		MPMX19_04300	0.80	-0.3
661,641	-		MPMX19_04300	0.80	-0.1
661,641	-		MPMX19_04300	0.80	+0.7
661,653	+		MPMX19_04300	0.80	-0.5
661,653	+		MPMX19_04300	0.80	+0.9
661,653	+		MPMX19_04300	0.80	-1.7
661,653	+		MPMX19_04300	0.80	+0.4
661,654	-		MPMX19_04300	0.80	+0.7
661,654	-		MPMX19_04300	0.80	-0.2
661,654	-		MPMX19_04300	0.80	+0.5
661,654	-		MPMX19_04300	0.80	-0.8
661,654	-		MPMX19_04300	0.80	+0.1
661,654	-		MPMX19_04300	0.80	+0.1
661,654	-		MPMX19_04300	0.80	+1.3
661,654	-		MPMX19_04300	0.80	-2.2
661,654	-		MPMX19_04300	0.80	+0.1
661,679	+		MPMX19_04300	0.82	+0.4
661,680	-		MPMX19_04300	0.82	-0.3
661,680	-		MPMX19_04300	0.82	+1.8
661,680	-		MPMX19_04300	0.82	-2.3
661,680	-		MPMX19_04300	0.82	-1.1
661,680	-		MPMX19_04300	0.82	-0.2
661,680	-		MPMX19_04300	0.82	-0.2
661,680	-		MPMX19_04300	0.82	+0.8
661,680	-		MPMX19_04300	0.82	-0.6
661,680	-		MPMX19_04300	0.82	-0.9
661,680	-		MPMX19_04300	0.82	+1.7
661,691	+		MPMX19_04300	0.82	+0.1
661,691	+		MPMX19_04300	0.82	-0.3
661,691	+		MPMX19_04300	0.82	+0.0
661,691	+		MPMX19_04300	0.82	-0.5
661,691	+		MPMX19_04300	0.82	-1.9
661,691	+		MPMX19_04300	0.82	+0.7
661,692	-		MPMX19_04300	0.82	+0.0
661,692	-		MPMX19_04300	0.82	-2.8
661,692	-		MPMX19_04300	0.82	-0.9
661,692	-		MPMX19_04300	0.82	+1.5
661,706	+		MPMX19_04300	0.83	-0.5
661,706	+		MPMX19_04300	0.83	-1.0
661,706	+		MPMX19_04300	0.83	+0.8
661,706	+		MPMX19_04300	0.83	-0.7
661,706	+		MPMX19_04300	0.83	-0.1
661,706	+		MPMX19_04300	0.83	-1.0
661,706	+		MPMX19_04300	0.83	+0.8
661,706	+		MPMX19_04300	0.83	+1.0
661,706	+		MPMX19_04300	0.83	-0.7
661,706	+		MPMX19_04300	0.83	-1.3
661,706	+		MPMX19_04300	0.83	+0.9
661,706	+		MPMX19_04300	0.83	-0.1
661,706	+		MPMX19_04300	0.83	-0.9
661,706	+		MPMX19_04300	0.83	-1.3
661,706	+		MPMX19_04300	0.83	+0.7
661,706	+		MPMX19_04300	0.83	-0.9
661,706	+		MPMX19_04300	0.83	+0.8
661,706	+		MPMX19_04300	0.83	-0.4
661,706	+		MPMX19_04300	0.83	+0.2
661,706	+		MPMX19_04300	0.83	-1.2
661,706	+		MPMX19_04300	0.83	+1.2
661,706	+		MPMX19_04300	0.83	-1.7
661,706	+		MPMX19_04300	0.83	+0.4
661,706	+		MPMX19_04300	0.83	+0.7
661,706	+		MPMX19_04300	0.83	-2.4
661,706	+		MPMX19_04300	0.83	+0.1
661,706	+		MPMX19_04300	0.83	-0.7
661,706	+		MPMX19_04300	0.83	-0.7
661,706	+		MPMX19_04300	0.83	-0.6
661,706	+		MPMX19_04300	0.83	-0.4
661,706	+		MPMX19_04300	0.83	+0.1
661,706	+		MPMX19_04300	0.83	-0.9
661,706	+		MPMX19_04300	0.83	-1.3
661,706	+		MPMX19_04300	0.83	+1.2
661,706	+		MPMX19_04300	0.83	-1.2
661,707	-		MPMX19_04300	0.83	-0.3
661,707	-		MPMX19_04300	0.83	-2.3
661,707	-		MPMX19_04300	0.83	+1.7
661,707	-		MPMX19_04300	0.83	-1.8
661,707	-		MPMX19_04300	0.83	-0.5
661,707	-		MPMX19_04300	0.83	+0.9
661,707	-		MPMX19_04300	0.83	-0.4
661,707	-		MPMX19_04300	0.83	-0.3
661,707	-		MPMX19_04300	0.83	-0.3
661,707	-		MPMX19_04300	0.83	+2.1
661,707	-		MPMX19_04300	0.83	-0.3
661,707	-		MPMX19_04300	0.83	+0.4
661,707	-		MPMX19_04300	0.83	+0.0
661,707	-		MPMX19_04300	0.83	-0.7
661,707	-		MPMX19_04300	0.83	-1.7
661,707	-		MPMX19_04300	0.83	+0.4
661,707	-		MPMX19_04300	0.83	-1.7
661,707	-		MPMX19_04300	0.83	+0.2
661,707	-		MPMX19_04300	0.83	-0.5
661,707	-		MPMX19_04300	0.83	-0.5
661,707	-		MPMX19_04300	0.83	+1.3
661,707	-		MPMX19_04300	0.83	-0.3
661,707	-		MPMX19_04300	0.83	-0.9
661,707	-		MPMX19_04300	0.83	-3.0
661,707	-		MPMX19_04300	0.83	+1.4
661,707	-		MPMX19_04300	0.83	-0.9
661,707	-		MPMX19_04300	0.83	-0.9
661,707	-		MPMX19_04300	0.83	-0.1
661,707	-		MPMX19_04300	0.83	-0.5
661,721	+		MPMX19_04300	0.84	+0.7
661,721	+		MPMX19_04300	0.84	+0.4
661,721	+		MPMX19_04300	0.84	+1.2
661,721	+		MPMX19_04300	0.84	-1.2
661,722	-		MPMX19_04300	0.84	-0.4
661,722	-		MPMX19_04300	0.84	-2.3
661,722	-		MPMX19_04300	0.84	-1.7
661,722	-		MPMX19_04300	0.84	-0.7
661,722	-		MPMX19_04300	0.84	+1.0
661,722	-		MPMX19_04300	0.84	+1.1
661,859	+				-0.1
661,859	+				-0.0
661,859	+				-0.2
661,859	+				-0.6
661,859	+				-0.5
661,859	+				-0.8
661,859	+				-0.2
661,859	+				-1.3
661,859	+				-1.9
661,859	+				+0.3
661,859	+				-1.1
661,859	+				-0.8
661,859	+				-0.8
661,860	-				-0.5
661,860	-				+0.2
661,860	-				-0.4
661,860	-				-0.5
661,860	-				-0.5
661,860	-				-1.9
661,860	-				+0.1
661,860	-				+1.1
661,860	-				-0.1
661,860	-				+1.2
661,860	-				-0.4
661,986	+				-1.1
661,986	+				-0.8
661,986	+				-0.5
661,986	+				-0.0
661,986	+				-2.4
661,986	+				-1.7
661,986	+				-1.1
661,986	+				+0.3
661,986	+				-0.5
661,986	+				+1.5
661,986	+				-1.3
661,986	+				-1.3
661,986	+				+0.1
661,987	-				+0.5
661,987	-				-0.3
661,987	-				-1.5
661,987	-				-0.2
662,164	-				-0.2
662,196	-				-0.3
662,198	+				+1.3
662,198	+				-0.7
662,198	+				+1.3
662,199	-				-0.0
662,199	-				-0.7
662,199	-				-0.0
662,199	-				-0.6
662,199	-				-0.2
662,199	-				+0.1
662,199	-				-1.5
662,207	+				-2.2
662,208	-				+2.2
662,304	+				-0.5
662,305	-				-0.7
662,305	-				-0.9
662,697	+		MPMX19_04301	0.48	-2.3
662,697	+		MPMX19_04301	0.48	+0.2
662,697	+		MPMX19_04301	0.48	+0.2
662,697	+		MPMX19_04301	0.48	-0.4
662,697	+		MPMX19_04301	0.48	-0.2
662,697	+		MPMX19_04301	0.48	+0.2
662,697	+		MPMX19_04301	0.48	+2.2
662,698	-		MPMX19_04301	0.48	+0.7
662,698	-		MPMX19_04301	0.48	+1.1
662,698	-		MPMX19_04301	0.48	-0.2
662,698	-		MPMX19_04301	0.48	+0.4
662,698	-		MPMX19_04301	0.48	+0.5
662,698	-		MPMX19_04301	0.48	-0.1
662,757	+		MPMX19_04301	0.54	-2.3
662,757	+		MPMX19_04301	0.54	+1.7
662,757	+		MPMX19_04301	0.54	+0.4
662,757	+		MPMX19_04301	0.54	-0.6
662,757	+		MPMX19_04301	0.54	+0.3
662,757	+		MPMX19_04301	0.54	-0.2
662,757	+		MPMX19_04301	0.54	-0.1
662,757	+		MPMX19_04301	0.54	+1.4
662,757	+		MPMX19_04301	0.54	-0.7
662,757	+		MPMX19_04301	0.54	+1.4
662,757	+		MPMX19_04301	0.54	-0.7
662,757	+		MPMX19_04301	0.54	+0.1
662,757	+		MPMX19_04301	0.54	+1.2
662,757	+		MPMX19_04301	0.54	-0.6
662,758	-		MPMX19_04301	0.54	-1.0
662,758	-		MPMX19_04301	0.54	+0.7
662,758	-		MPMX19_04301	0.54	+0.1
662,758	-		MPMX19_04301	0.54	+0.1
662,758	-		MPMX19_04301	0.54	+0.2
662,758	-		MPMX19_04301	0.54	-1.9
662,758	-		MPMX19_04301	0.54	+1.7
662,758	-		MPMX19_04301	0.54	+1.9
662,859	+		MPMX19_04301	0.65	-0.0
662,859	+		MPMX19_04301	0.65	-0.1
662,860	-		MPMX19_04301	0.65	+0.3
662,860	-		MPMX19_04301	0.65	-0.3
662,943	+		MPMX19_04301	0.74	+0.4
663,063	+		MPMX19_04301	0.86	+0.2
663,063	+		MPMX19_04301	0.86	-0.7
663,063	+		MPMX19_04301	0.86	+2.7
663,063	+		MPMX19_04301	0.86	-0.7
663,063	+		MPMX19_04301	0.86	-0.5
663,063	+		MPMX19_04301	0.86	-1.8
663,063	+		MPMX19_04301	0.86	+0.4
663,063	+		MPMX19_04301	0.86	+0.5
663,063	+		MPMX19_04301	0.86	+0.4
663,063	+		MPMX19_04301	0.86	+0.1
663,063	+		MPMX19_04301	0.86	-1.2
663,063	+		MPMX19_04301	0.86	+1.1
663,063	+		MPMX19_04301	0.86	+0.7
663,063	+		MPMX19_04301	0.86	+1.8
663,063	+		MPMX19_04301	0.86	+0.4
663,063	+		MPMX19_04301	0.86	-0.3
663,063	+		MPMX19_04301	0.86	+1.1
663,063	+		MPMX19_04301	0.86	+1.7
663,063	+		MPMX19_04301	0.86	-0.1
663,064	-		MPMX19_04301	0.86	-0.3
663,064	-		MPMX19_04301	0.86	-0.9
663,064	-		MPMX19_04301	0.86	+0.7
663,064	-		MPMX19_04301	0.86	-0.3
663,064	-		MPMX19_04301	0.86	+0.7
663,064	-		MPMX19_04301	0.86	+0.7
663,064	-		MPMX19_04301	0.86	-0.2
663,064	-		MPMX19_04301	0.86	+0.1
663,064	-		MPMX19_04301	0.86	+0.1
663,064	-		MPMX19_04301	0.86	-1.5
663,064	-		MPMX19_04301	0.86	-0.1
663,064	-		MPMX19_04301	0.86	-0.3
663,064	-		MPMX19_04301	0.86	-1.8
663,064	-		MPMX19_04301	0.86	-0.5
663,064	-		MPMX19_04301	0.86	-1.3
663,064	-		MPMX19_04301	0.86	-2.2
663,064	-		MPMX19_04301	0.86	-1.5
663,064	-		MPMX19_04301	0.86	-1.0
663,064	-		MPMX19_04301	0.86	-0.2
663,064	-		MPMX19_04301	0.86	-0.4
663,064	-		MPMX19_04301	0.86	-1.7
663,099	+				-0.3
663,099	+				-0.9
663,099	+				+0.3
663,099	+				-1.5
663,099	+				-0.6
663,099	+				-0.2
663,099	+				-0.3
663,099	+				+0.6
663,099	+				+0.7
663,099	+				+1.8
663,099	+				+1.4
663,099	+				+0.2
663,100	-				-0.2
663,100	-				-0.3
663,100	-				-0.5
663,100	-				+0.1
663,100	-				+0.2
663,100	-				+0.3
663,100	-				-2.0
663,100	-				-0.9
663,100	-				-0.5
663,100	-				+0.9
663,100	-				+0.1
663,100	-				-0.7
663,100	-				+0.3
663,100	-				+0.2
663,100	-				+1.1
663,100	-				-0.6
663,100	-				+0.2
663,100	-				+0.8
663,100	-				-1.8
663,100	-				+0.5
663,100	-				-1.2
663,100	-				-2.2
663,100	-				-1.8
663,452	+		MPMX19_04302	0.31	-1.7
663,452	+		MPMX19_04302	0.31	-0.4
663,452	+		MPMX19_04302	0.31	+0.8
663,453	-		MPMX19_04302	0.31	+0.4
663,453	-		MPMX19_04302	0.31	-1.0
663,453	-		MPMX19_04302	0.31	-0.2
663,590	+		MPMX19_04302	0.47	-0.6
663,590	+		MPMX19_04302	0.47	+0.3
663,590	+		MPMX19_04302	0.47	-1.3
663,590	+		MPMX19_04302	0.47	+0.2
663,590	+		MPMX19_04302	0.47	-2.3
663,590	+		MPMX19_04302	0.47	-1.5
663,590	+		MPMX19_04302	0.47	-0.2
663,590	+		MPMX19_04302	0.47	+1.4
663,590	+		MPMX19_04302	0.47	-2.0
663,590	+		MPMX19_04302	0.47	-0.0
663,590	+		MPMX19_04302	0.47	-0.5
663,590	+		MPMX19_04302	0.47	-0.2
663,590	+		MPMX19_04302	0.47	+0.1
663,591	-		MPMX19_04302	0.47	-1.1
663,591	-		MPMX19_04302	0.47	-0.2
663,591	-		MPMX19_04302	0.47	-1.1
663,591	-		MPMX19_04302	0.47	+0.2
663,591	-		MPMX19_04302	0.47	-0.8
663,591	-		MPMX19_04302	0.47	+0.6
663,591	-		MPMX19_04302	0.47	-2.0
663,591	-		MPMX19_04302	0.47	+1.0
663,591	-		MPMX19_04302	0.47	-2.6
663,591	-		MPMX19_04302	0.47	-1.3
663,725	+		MPMX19_04302	0.63	+0.1
663,725	+		MPMX19_04302	0.63	+0.2
663,725	+		MPMX19_04302	0.63	-2.5
663,725	+		MPMX19_04302	0.63	-0.7
663,725	+		MPMX19_04302	0.63	-0.2
663,726	-		MPMX19_04302	0.63	-0.3
663,726	-		MPMX19_04302	0.63	-0.1
663,726	-		MPMX19_04302	0.63	-0.3
663,726	-		MPMX19_04302	0.63	-1.7
663,749	+		MPMX19_04302	0.65	+0.7
663,917	+		MPMX19_04302	0.85	-0.5
663,917	+		MPMX19_04302	0.85	-0.3
663,917	+		MPMX19_04302	0.85	+0.1
663,918	-		MPMX19_04302	0.85	-1.4
663,918	-		MPMX19_04302	0.85	+0.2
663,918	-		MPMX19_04302	0.85	-1.6
663,918	-		MPMX19_04302	0.85	-0.3
664,023	+				+0.8
664,023	+				-0.2
664,023	+				+0.7
664,023	+				-1.0
664,024	-				-1.9
664,024	-				+0.8
664,024	-				-1.2
664,024	-				-0.0
664,062	+				-0.2
664,062	+				-0.6
664,062	+				-0.4
664,063	-				-1.3
664,128	-				-0.4
664,128	-				-0.5
664,128	-				-0.6
664,128	-				-1.0
664,193	+		MPMX19_04303	0.12	-1.7
664,193	+		MPMX19_04303	0.12	-0.7
664,193	+		MPMX19_04303	0.12	-0.4
664,193	+		MPMX19_04303	0.12	-0.4
664,193	+		MPMX19_04303	0.12	-1.0
664,193	+		MPMX19_04303	0.12	-0.7