Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02675

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,793,541	+		MPMX19_02674	0.21	+0.1
2,793,541	+		MPMX19_02674	0.21	-1.0
2,793,541	+		MPMX19_02674	0.21	-1.5
2,793,541	+		MPMX19_02674	0.21	-0.1
2,793,542	-		MPMX19_02674	0.22	+1.3
2,793,902	+		MPMX19_02674	0.55	+2.3
2,793,902	+		MPMX19_02674	0.55	+0.1
2,793,903	-		MPMX19_02674	0.55	+1.4
2,793,903	-		MPMX19_02674	0.55	-0.7
2,793,903	-		MPMX19_02674	0.55	-0.3
2,794,356	+				-0.4
2,794,356	+				-2.5
2,794,357	-				-1.6
2,794,391	+				-0.9
2,794,391	+				-0.6
2,794,392	-				-1.7
2,794,392	-				-1.7
2,794,392	-				-2.0
2,794,392	-				-0.9
2,794,434	+				-0.5
2,794,594	+				-1.7
2,794,594	+				-2.4
2,794,594	+				-1.7
2,794,594	+				+1.9
2,794,594	+				-0.6
2,794,594	+				+0.1
2,794,594	+				-1.8
2,794,594	+				-0.9
2,794,594	+				-2.3
2,794,595	-				-1.0
2,794,595	-				-2.2
2,794,595	-				-0.6
2,794,595	-				-1.8
2,794,595	-				-0.5
2,794,595	-				-0.7
2,794,595	-				-1.1
2,794,595	-				-1.1
2,794,595	-				+0.4
2,794,595	-				-0.9
2,794,595	-				-0.9
2,794,595	-				-1.6
2,794,699	+		MPMX19_02675	0.13	-0.3
2,794,699	+		MPMX19_02675	0.13	-1.8
2,794,699	+		MPMX19_02675	0.13	-1.2
2,794,699	+		MPMX19_02675	0.13	-0.9
2,794,699	+		MPMX19_02675	0.13	-0.9
2,794,699	+		MPMX19_02675	0.13	-0.1
2,794,699	+		MPMX19_02675	0.13	-1.7
2,794,700	-		MPMX19_02675	0.13	-1.7
2,794,700	-		MPMX19_02675	0.13	+0.1
2,794,700	-		MPMX19_02675	0.13	-1.0
2,794,700	-		MPMX19_02675	0.13	-1.3
2,794,700	-		MPMX19_02675	0.13	-0.6
2,794,873	+		MPMX19_02675	0.21	-1.8
2,794,873	+		MPMX19_02675	0.21	-1.5
2,794,873	+		MPMX19_02675	0.21	-0.4
2,794,874	-		MPMX19_02675	0.21	-0.5
2,794,874	-		MPMX19_02675	0.21	-0.6
2,794,874	-		MPMX19_02675	0.21	-1.4
2,794,874	-		MPMX19_02675	0.21	-1.7
2,795,202	+		MPMX19_02675	0.35	-3.0
2,795,215	+		MPMX19_02675	0.35	-0.3
2,795,215	+		MPMX19_02675	0.35	-2.4
2,795,215	+		MPMX19_02675	0.35	-2.0
2,795,216	-		MPMX19_02675	0.35	-0.6
2,795,216	-		MPMX19_02675	0.35	-1.6
2,795,216	-		MPMX19_02675	0.35	-1.3
2,795,216	-		MPMX19_02675	0.35	-1.1
2,795,350	+		MPMX19_02675	0.41	-1.6
2,795,350	+		MPMX19_02675	0.41	+0.7
2,795,350	+		MPMX19_02675	0.41	-1.2
2,795,350	+		MPMX19_02675	0.41	-0.7
2,795,350	+		MPMX19_02675	0.41	-0.6
2,795,350	+		MPMX19_02675	0.41	-1.7
2,795,350	+		MPMX19_02675	0.41	-1.5
2,795,350	+		MPMX19_02675	0.41	-2.5
2,795,350	+		MPMX19_02675	0.41	-2.1
2,795,350	+		MPMX19_02675	0.41	+0.0
2,795,350	+		MPMX19_02675	0.41	-1.6
2,795,350	+		MPMX19_02675	0.41	-3.2
2,795,351	-		MPMX19_02675	0.41	-2.1
2,795,351	-		MPMX19_02675	0.41	-0.0
2,795,351	-		MPMX19_02675	0.41	-1.7
2,795,351	-		MPMX19_02675	0.41	+0.1
2,795,351	-		MPMX19_02675	0.41	+1.0
2,795,351	-		MPMX19_02675	0.41	+0.1
2,795,351	-		MPMX19_02675	0.41	-3.4
2,795,351	-		MPMX19_02675	0.41	-2.5
2,795,351	-		MPMX19_02675	0.41	-1.5
2,795,351	-		MPMX19_02675	0.41	-0.9
2,795,351	-		MPMX19_02675	0.41	-1.9
2,795,351	-		MPMX19_02675	0.41	-0.5
2,795,351	-		MPMX19_02675	0.41	-1.8
2,795,351	-		MPMX19_02675	0.41	-0.6
2,795,351	-		MPMX19_02675	0.41	-0.6
2,795,351	-		MPMX19_02675	0.41	-1.1
2,795,501	-		MPMX19_02675	0.48	-0.2
2,795,501	-		MPMX19_02675	0.48	-2.5
2,795,583	+		MPMX19_02675	0.51	-0.8
2,795,584	-		MPMX19_02675	0.51	-0.7
2,795,584	-		MPMX19_02675	0.51	-1.2
2,795,584	-		MPMX19_02675	0.51	-0.7
2,795,584	-		MPMX19_02675	0.51	+0.7
2,795,584	-		MPMX19_02675	0.51	-1.5
2,795,743	+		MPMX19_02675	0.58	-2.1
2,795,743	+		MPMX19_02675	0.58	-0.7
2,795,743	+		MPMX19_02675	0.58	-0.9
2,795,743	+		MPMX19_02675	0.58	-0.1
2,795,743	+		MPMX19_02675	0.58	+0.1
2,795,743	+		MPMX19_02675	0.58	-2.9
2,795,743	+		MPMX19_02675	0.58	-1.2
2,795,743	+		MPMX19_02675	0.58	-0.8
2,795,743	+		MPMX19_02675	0.58	-1.3
2,795,743	+		MPMX19_02675	0.58	-2.0
2,795,743	+		MPMX19_02675	0.58	-0.8
2,795,743	+		MPMX19_02675	0.58	-0.2
2,795,743	+		MPMX19_02675	0.58	-1.0
2,795,744	-		MPMX19_02675	0.58	-0.8
2,795,744	-		MPMX19_02675	0.58	-3.1
2,795,744	-		MPMX19_02675	0.58	-2.4
2,795,744	-		MPMX19_02675	0.58	-2.7
2,795,744	-		MPMX19_02675	0.58	-1.0
2,795,744	-		MPMX19_02675	0.58	-0.3
2,795,744	-		MPMX19_02675	0.58	-0.8
2,795,744	-		MPMX19_02675	0.58	+1.0
2,795,744	-		MPMX19_02675	0.58	-2.0
2,795,744	-		MPMX19_02675	0.58	-1.3
2,795,744	-		MPMX19_02675	0.58	-0.6
2,795,744	-		MPMX19_02675	0.58	-1.5
2,795,744	-		MPMX19_02675	0.58	-3.3
2,795,744	-		MPMX19_02675	0.58	-3.1
2,795,744	-		MPMX19_02675	0.58	-1.4
2,795,744	-		MPMX19_02675	0.58	-2.1
2,795,744	-		MPMX19_02675	0.58	-1.7
2,795,744	-		MPMX19_02675	0.58	-1.1
2,795,744	-		MPMX19_02675	0.58	-0.5
2,795,744	-		MPMX19_02675	0.58	-1.1
2,795,744	-		MPMX19_02675	0.58	-0.9
2,795,744	-		MPMX19_02675	0.58	-1.9
2,795,744	-		MPMX19_02675	0.58	-0.6
2,795,744	-		MPMX19_02675	0.58	-1.5
2,795,869	+		MPMX19_02675	0.64	-0.9
2,795,869	+		MPMX19_02675	0.64	-0.8
2,795,870	-		MPMX19_02675	0.64	-2.2
2,795,870	-		MPMX19_02675	0.64	-0.7
2,795,870	-		MPMX19_02675	0.64	-0.1
2,795,870	-		MPMX19_02675	0.64	-2.5
2,795,905	+		MPMX19_02675	0.65	+0.1
2,795,905	+		MPMX19_02675	0.65	-0.1
2,795,905	+		MPMX19_02675	0.65	-2.7
2,795,905	+		MPMX19_02675	0.65	-2.9
2,795,906	-		MPMX19_02675	0.65	-1.6
2,795,935	+		MPMX19_02675	0.66	-0.7
2,795,935	+		MPMX19_02675	0.66	-0.1
2,795,935	+		MPMX19_02675	0.66	-1.9
2,795,935	+		MPMX19_02675	0.66	-1.5
2,795,935	+		MPMX19_02675	0.66	+0.3
2,795,935	+		MPMX19_02675	0.66	-0.9
2,795,935	+		MPMX19_02675	0.66	-0.9
2,795,935	+		MPMX19_02675	0.66	-0.9
2,795,936	-		MPMX19_02675	0.66	-1.9
2,795,936	-		MPMX19_02675	0.66	-1.1
2,795,936	-		MPMX19_02675	0.66	-1.5
2,795,936	-		MPMX19_02675	0.66	-1.7
2,795,936	-		MPMX19_02675	0.66	-0.9
2,795,936	-		MPMX19_02675	0.66	-0.7
2,796,016	+		MPMX19_02675	0.70	-2.3
2,796,016	+		MPMX19_02675	0.70	-2.2
2,796,016	+		MPMX19_02675	0.70	-0.8
2,796,016	+		MPMX19_02675	0.70	-1.3
2,796,016	+		MPMX19_02675	0.70	-0.1
2,796,016	+		MPMX19_02675	0.70	-2.0
2,796,016	+		MPMX19_02675	0.70	-0.4
2,796,016	+		MPMX19_02675	0.70	-0.7
2,796,016	+		MPMX19_02675	0.70	-2.9
2,796,016	+		MPMX19_02675	0.70	-1.4
2,796,016	+		MPMX19_02675	0.70	-1.7
2,796,016	+		MPMX19_02675	0.70	-0.8
2,796,016	+		MPMX19_02675	0.70	-0.7
2,796,016	+		MPMX19_02675	0.70	-1.3
2,796,016	+		MPMX19_02675	0.70	-0.2
2,796,017	-		MPMX19_02675	0.70	-2.9
2,796,017	-		MPMX19_02675	0.70	-0.4
2,796,017	-		MPMX19_02675	0.70	-0.5
2,796,017	-		MPMX19_02675	0.70	+0.2
2,796,017	-		MPMX19_02675	0.70	-2.1
2,796,017	-		MPMX19_02675	0.70	-0.4
2,796,017	-		MPMX19_02675	0.70	-0.1
2,796,017	-		MPMX19_02675	0.70	-0.1
2,796,017	-		MPMX19_02675	0.70	-2.7
2,796,017	-		MPMX19_02675	0.70	-2.1
2,796,017	-		MPMX19_02675	0.70	+0.2
2,796,017	-		MPMX19_02675	0.70	-0.3
2,796,017	-		MPMX19_02675	0.70	+0.1
2,796,017	-		MPMX19_02675	0.70	-0.7
2,796,017	-		MPMX19_02675	0.70	-2.2
2,796,017	-		MPMX19_02675	0.70	-1.8
2,796,017	-		MPMX19_02675	0.70	-0.2
2,796,017	-		MPMX19_02675	0.70	-0.5
2,796,361	+		MPMX19_02675	0.85	-1.6
2,796,361	+		MPMX19_02675	0.85	-1.7
2,796,361	+		MPMX19_02675	0.85	-1.7
2,796,361	+		MPMX19_02675	0.85	-2.5
2,796,361	+		MPMX19_02675	0.85	-1.1
2,796,361	+		MPMX19_02675	0.85	-1.7
2,796,361	+		MPMX19_02675	0.85	-2.7
2,796,362	-		MPMX19_02675	0.85	-1.5
2,796,362	-		MPMX19_02675	0.85	-2.2
2,796,362	-		MPMX19_02675	0.85	-0.9
2,796,362	-		MPMX19_02675	0.85	-0.5
2,796,362	-		MPMX19_02675	0.85	+0.7
2,796,362	-		MPMX19_02675	0.85	-0.3
2,796,362	-		MPMX19_02675	0.85	+0.5
2,796,362	-		MPMX19_02675	0.85	-1.0
2,796,362	-		MPMX19_02675	0.85	-1.4
2,796,362	-		MPMX19_02675	0.85	-1.7
2,796,362	-		MPMX19_02675	0.85	-0.4
2,796,362	-		MPMX19_02675	0.85	-1.1
2,796,362	-		MPMX19_02675	0.85	-0.2
2,796,486	+				-0.3
2,796,486	+				-1.2
2,796,486	+				-1.5
2,796,486	+				-1.3
2,796,486	+				+0.1
2,796,487	-				-2.5
2,796,487	-				-0.6
2,796,628	+				-0.5
2,796,628	+				-2.5
2,796,628	+				-2.7
2,796,628	+				-0.4
2,796,628	+				+0.1
2,796,628	+				-0.7
2,796,628	+				-2.9
2,796,628	+				-1.4
2,796,628	+				-1.1
2,796,628	+				+1.7
2,796,628	+				-3.7
2,796,628	+				-0.5
2,796,628	+				-1.5
2,796,628	+				-1.5
2,796,629	-				-2.8
2,796,629	-				-1.6
2,796,629	-				-1.5
2,796,629	-				-0.9
2,796,629	-				-0.0
2,796,629	-				-0.6
2,796,629	-				-1.6
2,796,629	-				-0.4
2,796,629	-				-1.6
2,796,629	-				-0.9
2,796,629	-				-0.6
2,796,629	-				-0.7
2,796,629	-				-0.1
2,796,629	-				-0.4
2,796,629	-				-2.1
2,796,629	-				-1.6
2,796,630	+				-2.0
2,796,630	+				-0.6
2,796,630	+				-1.0
2,796,630	+				-1.3
2,796,630	+				-1.7
2,796,630	+				+0.1
2,796,630	+				-2.0
2,796,630	+				-1.7
2,796,630	+				-1.1
2,796,630	+				-1.5
2,796,630	+				-0.0
2,796,630	+				-1.1
2,796,630	+				-1.9
2,796,630	+				-3.3
2,796,630	+				-0.3
2,796,630	+				-1.9
2,796,630	+				-1.5
2,796,630	+				-1.0
2,796,630	+				-0.5
2,796,631	-				+0.1
2,796,631	-				-2.1
2,796,631	-				-1.0
2,796,631	-				-1.0
2,796,631	-				-0.3
2,796,631	-				-0.6
2,796,631	-				-0.7
2,796,631	-				-1.5
2,796,631	-				+0.1
2,796,631	-				-1.1
2,796,631	-				-0.6
2,796,631	-				+2.1
2,796,631	-				-0.5
2,796,631	-				+0.3
2,796,643	+				-2.1
2,796,643	+				-0.7
2,796,643	+				-2.3
2,796,643	+				+0.1
2,796,643	+				-1.8
2,796,643	+				+0.2
2,796,643	+				-0.1
2,796,644	-				-0.3
2,796,644	-				-0.7
2,796,644	-				-1.2
2,796,644	-				+0.7
2,796,644	-				-0.7
2,796,644	-				+0.1
2,796,644	-				-3.9
2,796,750	+				-0.2
2,796,751	-				+1.4
2,796,751	-				+0.5
2,796,751	-				-0.5
2,796,751	-				-0.4
2,796,858	+				-1.1
2,796,858	+				-0.6
2,796,858	+				-1.5
2,796,858	+				-0.6
2,796,858	+				-1.0
2,796,859	-				+0.3
2,796,859	-				-0.0
2,796,901	-				-0.3
2,796,901	-				-2.0
2,796,954	+				-0.1
2,796,954	+				-0.6
2,796,954	+				-0.9
2,796,954	+				+0.1
2,796,954	+				-0.5
2,796,954	+				-1.8
2,796,954	+				-0.3
2,796,955	-				-0.5
2,796,955	-				-0.5
2,796,955	-				+0.6
2,796,955	-				+0.4
2,796,955	-				+0.7
2,796,955	-				+0.1
2,796,955	-				-1.0
2,796,955	-				-1.9
2,796,955	-				-0.6
2,796,965	+				+1.0
2,796,966	-				+0.4
2,796,966	-				+0.4
2,797,025	+				-0.7
2,797,025	+				+0.2
2,797,025	+				-0.1
2,797,026	-				+0.4
2,797,026	-				-3.0
2,797,026	-				-0.0
2,797,026	-				+0.7
2,797,026	-				-1.7
2,797,026	-				+0.3
2,797,026	-				-0.2
2,797,026	-				-0.4
2,797,026	-				-0.6
2,797,060	+		MPMX19_02676	0.14	+0.8
2,797,060	+		MPMX19_02676	0.14	-0.3
2,797,060	+		MPMX19_02676	0.14	-0.5
2,797,061	-		MPMX19_02676	0.14	-1.3
2,797,061	-		MPMX19_02676	0.14	+0.5
2,797,061	-		MPMX19_02676	0.14	+0.1
2,797,061	-		MPMX19_02676	0.14	-0.6
2,797,094	+		MPMX19_02676	0.18	-0.3
2,797,095	-		MPMX19_02676	0.18	-1.3
2,797,172	-		MPMX19_02676	0.28	+1.4
2,797,205	+		MPMX19_02676	0.32	-0.7
2,797,274	+		MPMX19_02676	0.40	+0.6
2,797,392	-		MPMX19_02676	0.55	+1.7
2,797,392	-		MPMX19_02676	0.55	-0.3
2,797,430	+		MPMX19_02676	0.60	-0.8
2,797,430	+		MPMX19_02676	0.60	+0.7
2,797,430	+		MPMX19_02676	0.60	-0.5
2,797,430	+		MPMX19_02676	0.60	-1.3
2,797,430	+		MPMX19_02676	0.60	+0.1
2,797,430	+		MPMX19_02676	0.60	-0.3
2,797,430	+		MPMX19_02676	0.60	-1.2
2,797,430	+		MPMX19_02676	0.60	-0.6
2,797,430	+		MPMX19_02676	0.60	-0.7
2,797,430	+		MPMX19_02676	0.60	+0.3
2,797,430	+		MPMX19_02676	0.60	-0.2
2,797,430	+		MPMX19_02676	0.60	-2.4
2,797,430	+		MPMX19_02676	0.60	-1.0
2,797,430	+		MPMX19_02676	0.60	-0.1
2,797,430	+		MPMX19_02676	0.60	+0.2
2,797,430	+		MPMX19_02676	0.60	-0.5
2,797,431	-		MPMX19_02676	0.60	+0.5
2,797,431	-		MPMX19_02676	0.60	-1.3
2,797,431	-		MPMX19_02676	0.60	-0.9
2,797,431	-		MPMX19_02676	0.60	-0.6
2,797,431	-		MPMX19_02676	0.60	-0.6
2,797,431	-		MPMX19_02676	0.60	+0.7
2,797,431	-		MPMX19_02676	0.60	+0.7
2,797,431	-		MPMX19_02676	0.60	-2.1
2,797,431	-		MPMX19_02676	0.60	+0.6
2,797,431	-		MPMX19_02676	0.60	+0.1
2,797,431	-		MPMX19_02676	0.60	-2.3
2,797,511	+		MPMX19_02676	0.70	-0.0
2,797,511	+		MPMX19_02676	0.70	-0.3
2,797,512	-		MPMX19_02676	0.70	+0.3
2,797,512	-		MPMX19_02676	0.70	-1.4
2,797,523	+		MPMX19_02676	0.71	-0.1
2,797,523	+		MPMX19_02676	0.71	-1.0
2,797,523	+		MPMX19_02676	0.71	-1.7
2,797,523	+		MPMX19_02676	0.71	-1.5
2,797,524	-		MPMX19_02676	0.71	-0.1
2,797,524	-		MPMX19_02676	0.71	-2.3
2,797,524	-		MPMX19_02676	0.71	-2.5
2,797,524	-		MPMX19_02676	0.71	-0.1
2,797,524	-		MPMX19_02676	0.71	+0.5
2,797,524	-		MPMX19_02676	0.71	+0.7
2,797,589	+		MPMX19_02676	0.79	-0.5
2,797,589	+		MPMX19_02676	0.79	-0.0
2,797,589	+		MPMX19_02676	0.79	+1.6
2,797,589	+		MPMX19_02676	0.79	+0.3
2,797,589	+		MPMX19_02676	0.79	+0.7
2,797,589	+		MPMX19_02676	0.79	-1.0
2,797,589	+		MPMX19_02676	0.79	+0.5
2,797,589	+		MPMX19_02676	0.79	-0.9
2,797,589	+		MPMX19_02676	0.79	-0.9
2,797,589	+		MPMX19_02676	0.79	+0.3
2,797,589	+		MPMX19_02676	0.79	+0.9
2,797,589	+		MPMX19_02676	0.79	-2.3
2,797,589	+		MPMX19_02676	0.79	-0.6
2,797,589	+		MPMX19_02676	0.79	-0.8
2,797,589	+		MPMX19_02676	0.79	+0.3
2,797,589	+		MPMX19_02676	0.79	+0.2
2,797,589	+		MPMX19_02676	0.79	+0.3
2,797,589	+		MPMX19_02676	0.79	-0.9
2,797,589	+		MPMX19_02676	0.79	-0.9
2,797,589	+		MPMX19_02676	0.79	-1.3
2,797,589	+		MPMX19_02676	0.79	+0.5
2,797,590	-		MPMX19_02676	0.79	+0.6
2,797,590	-		MPMX19_02676	0.79	-1.7
2,797,590	-		MPMX19_02676	0.79	-2.0
2,797,590	-		MPMX19_02676	0.79	-2.2
2,797,590	-		MPMX19_02676	0.79	-0.2
2,797,590	-		MPMX19_02676	0.79	-1.7
2,797,590	-		MPMX19_02676	0.79	-0.9
2,797,590	-		MPMX19_02676	0.79	-0.5
2,797,590	-		MPMX19_02676	0.79	-2.3
2,797,590	-		MPMX19_02676	0.79	+1.1
2,797,590	-		MPMX19_02676	0.79	-0.7
2,797,590	-		MPMX19_02676	0.79	+2.5
2,797,590	-		MPMX19_02676	0.79	-1.3