Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02339

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,463,490	+		MPMX19_02338	0.60	-0.9
2,463,490	+		MPMX19_02338	0.60	-0.2
2,463,490	+		MPMX19_02338	0.60	-0.6
2,463,490	+		MPMX19_02338	0.60	-0.3
2,463,490	+		MPMX19_02338	0.60	-0.4
2,463,490	+		MPMX19_02338	0.60	-0.8
2,463,490	+		MPMX19_02338	0.60	-0.9
2,463,490	+		MPMX19_02338	0.60	-0.1
2,463,490	+		MPMX19_02338	0.60	-0.6
2,463,490	+		MPMX19_02338	0.60	+1.4
2,463,490	+		MPMX19_02338	0.60	-0.9
2,463,490	+		MPMX19_02338	0.60	+0.7
2,463,490	+		MPMX19_02338	0.60	-1.8
2,463,490	+		MPMX19_02338	0.60	-0.6
2,463,490	+		MPMX19_02338	0.60	-1.3
2,463,490	+		MPMX19_02338	0.60	-1.1
2,463,490	+		MPMX19_02338	0.60	-0.6
2,463,490	+		MPMX19_02338	0.60	+0.1
2,463,490	+		MPMX19_02338	0.60	-0.4
2,463,491	-		MPMX19_02338	0.60	+1.2
2,463,491	-		MPMX19_02338	0.60	-1.6
2,463,491	-		MPMX19_02338	0.60	-0.4
2,463,491	-		MPMX19_02338	0.60	-0.6
2,463,491	-		MPMX19_02338	0.60	+0.0
2,463,491	-		MPMX19_02338	0.60	+0.7
2,463,491	-		MPMX19_02338	0.60	-1.6
2,463,491	-		MPMX19_02338	0.60	-0.9
2,463,491	-		MPMX19_02338	0.60	-0.2
2,463,491	-		MPMX19_02338	0.60	-0.3
2,463,491	-		MPMX19_02338	0.60	-0.6
2,463,491	-		MPMX19_02338	0.60	-0.8
2,463,491	-		MPMX19_02338	0.60	-0.6
2,463,491	-		MPMX19_02338	0.60	-0.8
2,463,547	+		MPMX19_02338	0.75	-2.1
2,463,547	+		MPMX19_02338	0.75	+0.3
2,463,547	+		MPMX19_02338	0.75	+0.2
2,463,547	+		MPMX19_02338	0.75	+0.8
2,463,547	+		MPMX19_02338	0.75	-0.3
2,463,547	+		MPMX19_02338	0.75	+1.1
2,463,547	+		MPMX19_02338	0.75	-0.9
2,463,548	-		MPMX19_02338	0.75	+0.7
2,463,548	-		MPMX19_02338	0.75	-2.0
2,463,548	-		MPMX19_02338	0.75	+0.1
2,463,548	-		MPMX19_02338	0.75	-1.9
2,463,548	-		MPMX19_02338	0.75	-0.7
2,463,548	-		MPMX19_02338	0.75	+0.4
2,463,548	-		MPMX19_02338	0.75	-1.5
2,463,670	+				-1.1
2,463,670	+				-1.2
2,463,670	+				-1.1
2,463,671	-				-1.6
2,463,750	+				+0.9
2,463,924	-				-1.1
2,463,982	+				-0.2
2,463,982	+				-0.1
2,463,983	-				-0.6
2,464,025	+				+0.5
2,464,025	+				+0.5
2,464,025	+				-0.1
2,464,025	+				-2.6
2,464,025	+				+0.9
2,464,025	+				+1.3
2,464,025	+				-0.4
2,464,025	+				-0.3
2,464,026	-				+0.3
2,464,026	-				-0.6
2,464,026	-				+1.5
2,464,026	-				-0.1
2,464,078	+				-0.1
2,464,078	+				-0.2
2,464,078	+				-1.5
2,464,078	+				+0.6
2,464,078	+				-1.2
2,464,078	+				+1.9
2,464,078	+				-0.3
2,464,078	+				-1.6
2,464,078	+				+0.1
2,464,078	+				-0.0
2,464,078	+				-2.0
2,464,079	-				+0.5
2,464,079	-				+0.4
2,464,079	-				-0.9
2,464,079	-				+0.9
2,464,079	-				-1.6
2,464,079	-				-0.2
2,464,079	-				-0.2
2,464,079	-				+0.1
2,464,079	-				-1.7
2,464,114	+				+0.8
2,464,114	+				+0.5
2,464,114	+				-1.8
2,464,114	+				-0.7
2,464,114	+				-2.0
2,464,114	+				-0.1
2,464,114	+				-1.1
2,464,114	+				-1.2
2,464,114	+				-0.2
2,464,114	+				+0.0
2,464,114	+				-0.3
2,464,114	+				-0.6
2,464,114	+				+0.3
2,464,114	+				-1.5
2,464,114	+				+0.0
2,464,114	+				+0.8
2,464,114	+				-1.4
2,464,114	+				-1.0
2,464,114	+				-2.3
2,464,114	+				+0.7
2,464,114	+				+0.0
2,464,114	+				-1.5
2,464,114	+				-0.2
2,464,114	+				-0.5
2,464,114	+				+0.1
2,464,114	+				-0.9
2,464,115	-				-1.4
2,464,115	-				-0.2
2,464,115	-				-0.4
2,464,115	-				+0.7
2,464,115	-				+0.5
2,464,115	-				+0.6
2,464,115	-				-1.1
2,464,115	-				+1.3
2,464,115	-				+0.9
2,464,115	-				-1.9
2,464,115	-				-1.3
2,464,115	-				+0.4
2,464,115	-				-0.1
2,464,115	-				-1.8
2,464,115	-				+1.9
2,464,115	-				-2.0
2,464,115	-				-0.5
2,464,115	-				+0.4
2,464,115	-				-0.4
2,464,115	-				+0.7
2,464,115	-				+0.4
2,464,115	-				+0.4
2,464,115	-				+0.1
2,464,115	-				-0.3
2,464,133	+				-1.0
2,464,133	+				-0.9
2,464,133	+				+0.9
2,464,133	+				-0.4
2,464,133	+				-1.0
2,464,133	+				+0.2
2,464,133	+				-1.6
2,464,133	+				-0.1
2,464,133	+				-0.2
2,464,133	+				+0.4
2,464,133	+				-0.9
2,464,133	+				-0.9
2,464,133	+				-1.6
2,464,134	-				-0.6
2,464,134	-				-0.9
2,464,134	-				-1.1
2,464,134	-				-0.9
2,464,134	-				-1.1
2,464,134	-				-0.2
2,464,134	-				-1.6
2,464,134	-				-0.2
2,464,134	-				-0.4
2,464,134	-				-2.3
2,464,137	+				-0.5
2,464,137	+				+0.4
2,464,137	+				+0.8
2,464,137	+				-1.1
2,464,137	+				+0.9
2,464,137	+				-0.2
2,464,137	+				-1.5
2,464,137	+				-0.3
2,464,138	-				-0.2
2,464,138	-				-0.6
2,464,138	-				-0.6
2,464,138	-				-1.4
2,464,138	-				+1.4
2,464,138	-				+0.4
2,464,138	-				-0.9
2,464,138	-				-0.1
2,464,138	-				-1.0
2,464,138	-				-0.6
2,464,158	+				+0.1
2,464,158	+				-1.8
2,464,158	+				-2.1
2,464,158	+				+0.0
2,464,158	+				-0.6
2,464,158	+				-1.5
2,464,159	-				-0.5
2,464,159	-				+0.1
2,464,159	-				-0.8
2,464,159	-				-1.4
2,464,159	-				+0.1
2,464,159	-				+1.8
2,464,159	-				-0.0
2,464,159	-				-1.9
2,464,159	-				-0.5
2,464,159	-				-1.3
2,464,159	-				-0.3
2,464,308	-				+1.2
2,464,382	+				-0.2
2,464,382	+				+1.0
2,464,382	+				-1.8
2,464,382	+				-1.8
2,464,383	-				-1.9
2,464,383	-				+0.5
2,464,383	-				-0.5
2,464,383	-				-0.3
2,464,391	+				-2.4
2,464,443	+				-0.1
2,464,443	+				-0.6
2,464,443	+				-0.5
2,464,443	+				+0.9
2,464,443	+				+0.0
2,464,443	+				-2.0
2,464,443	+				-0.9
2,464,444	-				-1.2
2,464,444	-				-0.9
2,464,444	-				+0.7
2,464,444	-				-1.1
2,464,444	-				+0.0
2,464,444	-				-0.2
2,464,444	-				-0.1
2,464,444	-				-0.2
2,464,530	+		MPMX19_02339	0.29	-1.0
2,464,530	+		MPMX19_02339	0.29	+0.4
2,464,530	+		MPMX19_02339	0.29	+0.0
2,464,530	+		MPMX19_02339	0.29	+0.2
2,464,531	-		MPMX19_02339	0.29	-0.6
2,464,567	+		MPMX19_02339	0.39	-0.4
2,464,567	+		MPMX19_02339	0.39	-0.4
2,464,568	-		MPMX19_02339	0.39	+1.4
2,464,568	-		MPMX19_02339	0.39	+0.7
2,464,608	+		MPMX19_02339	0.50	+1.6
2,464,608	+		MPMX19_02339	0.50	-0.4
2,464,608	+		MPMX19_02339	0.50	-0.6
2,464,608	+		MPMX19_02339	0.50	-1.6
2,464,608	+		MPMX19_02339	0.50	+1.7
2,464,608	+		MPMX19_02339	0.50	-0.6
2,464,608	+		MPMX19_02339	0.50	-0.3
2,464,608	+		MPMX19_02339	0.50	-0.1
2,464,608	+		MPMX19_02339	0.50	-1.5
2,464,608	+		MPMX19_02339	0.50	-1.3
2,464,608	+		MPMX19_02339	0.50	+0.2
2,464,608	+		MPMX19_02339	0.50	-2.6
2,464,608	+		MPMX19_02339	0.50	+0.9
2,464,608	+		MPMX19_02339	0.50	+0.8
2,464,608	+		MPMX19_02339	0.50	+0.1
2,464,608	+		MPMX19_02339	0.50	+0.9
2,464,608	+		MPMX19_02339	0.50	+0.7
2,464,608	+		MPMX19_02339	0.50	-0.9
2,464,608	+		MPMX19_02339	0.50	-0.4
2,464,608	+		MPMX19_02339	0.50	-0.4
2,464,608	+		MPMX19_02339	0.50	-1.5
2,464,608	+		MPMX19_02339	0.50	-0.3
2,464,608	+		MPMX19_02339	0.50	-1.6
2,464,609	-		MPMX19_02339	0.50	-0.4
2,464,609	-		MPMX19_02339	0.50	-0.8
2,464,609	-		MPMX19_02339	0.50	+1.1
2,464,609	-		MPMX19_02339	0.50	+0.4
2,464,609	-		MPMX19_02339	0.50	-0.5
2,464,609	-		MPMX19_02339	0.50	-0.3
2,464,609	-		MPMX19_02339	0.50	-2.7
2,464,609	-		MPMX19_02339	0.50	+0.6
2,464,609	-		MPMX19_02339	0.50	-1.9
2,464,609	-		MPMX19_02339	0.50	+0.1
2,464,633	+		MPMX19_02339	0.57	-1.5
2,464,633	+		MPMX19_02339	0.57	+0.0
2,464,634	-		MPMX19_02339	0.57	+0.7
2,464,634	-		MPMX19_02339	0.57	-1.1
2,464,643	+		MPMX19_02339	0.59	+1.7
2,464,643	+		MPMX19_02339	0.59	+0.1
2,464,643	+		MPMX19_02339	0.59	-0.1
2,464,644	-		MPMX19_02339	0.60	-0.6
2,464,652	+		MPMX19_02339	0.62	-1.6
2,464,652	+		MPMX19_02339	0.62	+0.1
2,464,652	+		MPMX19_02339	0.62	-0.9
2,464,652	+		MPMX19_02339	0.62	-0.1
2,464,652	+		MPMX19_02339	0.62	-2.1
2,464,652	+		MPMX19_02339	0.62	-0.3
2,464,652	+		MPMX19_02339	0.62	-1.0
2,464,652	+		MPMX19_02339	0.62	-1.6
2,464,652	+		MPMX19_02339	0.62	+1.1
2,464,652	+		MPMX19_02339	0.62	-1.9
2,464,653	-		MPMX19_02339	0.62	-0.3
2,464,653	-		MPMX19_02339	0.62	+0.9
2,464,653	-		MPMX19_02339	0.62	-0.3
2,464,653	-		MPMX19_02339	0.62	-0.1
2,464,703	+		MPMX19_02339	0.76	-1.3
2,464,703	+		MPMX19_02339	0.76	-0.5
2,464,703	+		MPMX19_02339	0.76	-0.9
2,464,703	+		MPMX19_02339	0.76	-1.3
2,464,740	-		MPMX19_02339	0.86	+0.1
2,464,740	-		MPMX19_02339	0.86	+1.1
2,464,740	-		MPMX19_02339	0.86	-0.4
2,464,749	+		MPMX19_02339	0.88	-0.5
2,464,749	+		MPMX19_02339	0.88	-1.8
2,464,749	+		MPMX19_02339	0.88	+0.7
2,464,749	+		MPMX19_02339	0.88	+0.1
2,464,749	+		MPMX19_02339	0.88	-1.5
2,464,749	+		MPMX19_02339	0.88	+0.1
2,464,749	+		MPMX19_02339	0.88	+0.2
2,464,749	+		MPMX19_02339	0.88	-1.1
2,464,749	+		MPMX19_02339	0.88	-1.1
2,464,749	+		MPMX19_02339	0.88	-0.0
2,464,749	+		MPMX19_02339	0.88	+1.3
2,464,749	+		MPMX19_02339	0.88	-0.9
2,464,749	+		MPMX19_02339	0.88	+0.9
2,464,749	+		MPMX19_02339	0.88	-1.5
2,464,749	+		MPMX19_02339	0.88	-0.8
2,464,750	-		MPMX19_02339	0.88	-2.1
2,464,750	-		MPMX19_02339	0.88	+0.4
2,464,750	-		MPMX19_02339	0.88	+1.4
2,464,750	-		MPMX19_02339	0.88	-1.8
2,464,750	-		MPMX19_02339	0.88	-0.4
2,464,750	-		MPMX19_02339	0.88	-0.6
2,464,750	-		MPMX19_02339	0.88	+0.4
2,464,750	-		MPMX19_02339	0.88	-0.3
2,464,750	-		MPMX19_02339	0.88	-0.3
2,464,750	-		MPMX19_02339	0.88	+2.9
2,464,750	-		MPMX19_02339	0.88	+0.1
2,464,750	-		MPMX19_02339	0.88	+1.0
2,464,750	-		MPMX19_02339	0.88	+0.4
2,464,750	-		MPMX19_02339	0.88	-1.9
2,464,754	+		MPMX19_02339	0.89	-0.4
2,464,754	+		MPMX19_02339	0.89	-1.1
2,464,754	+		MPMX19_02339	0.89	-1.1
2,464,754	+		MPMX19_02339	0.89	+0.8
2,464,754	+		MPMX19_02339	0.89	-1.8
2,464,754	+		MPMX19_02339	0.89	-0.3
2,464,754	+		MPMX19_02339	0.89	-0.5
2,464,754	+		MPMX19_02339	0.89	-0.6
2,464,754	+		MPMX19_02339	0.89	-2.5
2,464,755	-		MPMX19_02339	0.90	-0.8
2,464,755	-		MPMX19_02339	0.90	-0.0
2,464,755	-		MPMX19_02339	0.90	-1.8
2,464,755	-		MPMX19_02339	0.90	-0.5
2,464,755	-		MPMX19_02339	0.90	-0.9
2,464,755	-		MPMX19_02339	0.90	-1.6
2,464,755	-		MPMX19_02339	0.90	+0.3
2,464,755	-		MPMX19_02339	0.90	-1.5
2,464,755	-		MPMX19_02339	0.90	+0.1
2,464,800	+				+0.1
2,464,800	+				-0.4
2,464,800	+				+0.5
2,464,801	-				-0.9
2,464,846	+				-1.7
2,464,846	+				+0.1
2,464,846	+				+0.7
2,464,846	+				+0.1
2,464,847	-				-2.2
2,464,847	-				-0.8
2,464,847	-				-0.5
2,464,847	-				-0.2
2,464,850	+				-0.6
2,464,850	+				-1.9
2,464,850	+				-1.1
2,464,850	+				-0.3
2,464,851	-				-0.7
2,464,851	-				-1.1
2,464,867	+				-0.4
2,464,868	-				-2.4
2,464,868	-				+0.2
2,464,868	-				-1.4
2,464,868	-				-1.7
2,465,051	+				+0.1
2,465,052	-				-1.3
2,465,118	+				-0.9
2,465,118	+				+0.1
2,465,118	+				-1.5
2,465,118	+				-0.1
2,465,118	+				-0.3
2,465,118	+				-0.9
2,465,118	+				-0.5
2,465,119	-				-0.5
2,465,119	-				-0.9
2,465,119	-				-0.1
2,465,119	-				-0.4
2,465,119	-				+0.5
2,465,119	-				+1.3
2,465,119	-				+0.9
2,465,119	-				+1.7
2,465,119	-				-0.9
2,465,119	-				-0.9
2,465,119	-				-0.1
2,465,119	-				-0.4
2,465,125	+				-0.0
2,465,125	+				-0.3
2,465,125	+				-2.4
2,465,125	+				+1.1
2,465,125	+				-0.7
2,465,125	+				-2.1
2,465,125	+				-1.6
2,465,125	+				+0.7
2,465,125	+				+0.1
2,465,125	+				+0.8
2,465,125	+				-0.1
2,465,126	-				+0.9
2,465,126	-				-0.6
2,465,126	-				-1.1
2,465,126	-				-0.6
2,465,126	-				-0.4
2,465,126	-				-1.6
2,465,126	-				+0.8
2,465,126	-				-2.2
2,465,181	+				+0.4
2,465,181	+				+0.5
2,465,181	+				+0.5
2,465,181	+				+0.2
2,465,181	+				-0.6
2,465,182	-				+1.0
2,465,182	-				-1.3
2,465,182	-				-0.2
2,465,182	-				+0.7
2,465,192	+				+0.1
2,465,193	-				-0.2
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2,465,193	-				-0.4
2,465,242	-				-0.3
2,465,277	+				-0.8
2,465,277	+				+0.9
2,465,277	+				-1.8
2,465,277	+				+0.1
2,465,277	+				+0.5
2,465,277	+				-1.1
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2,465,278	-				+1.2
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2,465,278	-				+0.2
2,465,278	-				-1.6
2,465,278	-				-1.1
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2,465,449	+				-1.9
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2,465,450	-				-1.1
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2,465,450	-				-2.1
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2,465,450	-				-0.3
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2,465,450	-				-1.2
2,465,450	-				+0.0
2,465,450	-				-1.5
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2,465,451	+				+0.2
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2,465,452	-				-0.3
2,465,452	-				+0.7
2,465,452	-				-0.6
2,465,452	-				-0.9
2,465,452	-				+1.5
2,465,452	-				+0.1
2,465,452	-				+0.4
2,465,452	-				-1.1
2,465,452	-				-0.6
2,465,507	+				+0.1
2,465,507	+				+0.5
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2,465,671	+		MPMX19_02340	0.12	+0.2
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2,465,671	+		MPMX19_02340	0.12	+0.1
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2,465,671	+		MPMX19_02340	0.12	+0.1
2,465,671	+		MPMX19_02340	0.12	-0.8
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2,465,672	-		MPMX19_02340	0.12	-0.2
2,465,672	-		MPMX19_02340	0.12	-0.6
2,465,672	-		MPMX19_02340	0.12	-0.9
2,465,672	-		MPMX19_02340	0.12	-1.5
2,465,672	-		MPMX19_02340	0.12	-0.2
2,465,672	-		MPMX19_02340	0.12	+0.6