Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01136

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,168,863	+		MPMX19_01135	0.32	-1.9
1,168,863	+		MPMX19_01135	0.32	-0.4
1,168,863	+		MPMX19_01135	0.32	-1.1
1,168,863	+		MPMX19_01135	0.32	-0.3
1,168,863	+		MPMX19_01135	0.32	+1.5
1,168,864	-		MPMX19_01135	0.32	-0.4
1,168,864	-		MPMX19_01135	0.32	-0.9
1,168,864	-		MPMX19_01135	0.32	-2.2
1,168,865	+		MPMX19_01135	0.32	+0.3
1,168,865	+		MPMX19_01135	0.32	-0.9
1,168,865	+		MPMX19_01135	0.32	-1.4
1,168,865	+		MPMX19_01135	0.32	-0.9
1,168,865	+		MPMX19_01135	0.32	-0.1
1,168,865	+		MPMX19_01135	0.32	-0.7
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	+1.1
1,168,865	+		MPMX19_01135	0.32	-0.7
1,168,865	+		MPMX19_01135	0.32	+1.1
1,168,865	+		MPMX19_01135	0.32	-2.3
1,168,865	+		MPMX19_01135	0.32	-2.9
1,168,865	+		MPMX19_01135	0.32	-1.1
1,168,865	+		MPMX19_01135	0.32	-0.4
1,168,865	+		MPMX19_01135	0.32	+0.4
1,168,865	+		MPMX19_01135	0.32	-0.1
1,168,865	+		MPMX19_01135	0.32	-0.8
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	+0.1
1,168,865	+		MPMX19_01135	0.32	-0.3
1,168,865	+		MPMX19_01135	0.32	-1.1
1,168,865	+		MPMX19_01135	0.32	-1.1
1,168,865	+		MPMX19_01135	0.32	-2.0
1,168,866	-		MPMX19_01135	0.32	+0.4
1,168,866	-		MPMX19_01135	0.32	+1.1
1,168,866	-		MPMX19_01135	0.32	-0.1
1,168,866	-		MPMX19_01135	0.32	-0.8
1,168,866	-		MPMX19_01135	0.32	-0.0
1,168,866	-		MPMX19_01135	0.32	-0.9
1,168,866	-		MPMX19_01135	0.32	-0.1
1,168,866	-		MPMX19_01135	0.32	+0.0
1,168,866	-		MPMX19_01135	0.32	-0.6
1,168,866	-		MPMX19_01135	0.32	-0.7
1,168,866	-		MPMX19_01135	0.32	-0.4
1,168,866	-		MPMX19_01135	0.32	+1.1
1,168,866	-		MPMX19_01135	0.32	-0.1
1,168,866	-		MPMX19_01135	0.32	+0.2
1,168,866	-		MPMX19_01135	0.32	-0.5
1,168,866	-		MPMX19_01135	0.32	-1.0
1,168,944	+		MPMX19_01135	0.42	-2.0
1,168,944	+		MPMX19_01135	0.42	-0.7
1,168,944	+		MPMX19_01135	0.42	+1.0
1,168,944	+		MPMX19_01135	0.42	+0.7
1,168,944	+		MPMX19_01135	0.42	-0.0
1,168,944	+		MPMX19_01135	0.42	-1.1
1,168,944	+		MPMX19_01135	0.42	-0.1
1,168,944	+		MPMX19_01135	0.42	-1.6
1,168,944	+		MPMX19_01135	0.42	-0.0
1,168,945	-		MPMX19_01135	0.42	-1.9
1,168,945	-		MPMX19_01135	0.42	+0.0
1,168,945	-		MPMX19_01135	0.42	+0.2
1,168,945	-		MPMX19_01135	0.42	+0.4
1,168,945	-		MPMX19_01135	0.42	+0.2
1,168,945	-		MPMX19_01135	0.42	-1.0
1,168,945	-		MPMX19_01135	0.42	+0.4
1,168,945	-		MPMX19_01135	0.42	-1.6
1,168,945	-		MPMX19_01135	0.42	-0.5
1,168,945	-		MPMX19_01135	0.42	+0.2
1,169,211	-		MPMX19_01135	0.77	-2.1
1,169,327	+				+1.4
1,169,327	+				-1.7
1,169,327	+				-0.4
1,169,327	+				-0.9
1,169,327	+				-2.0
1,169,327	+				-2.1
1,169,327	+				-0.3
1,169,327	+				+0.1
1,169,327	+				-0.1
1,169,327	+				-0.1
1,169,327	+				+0.3
1,169,327	+				-0.5
1,169,327	+				-1.0
1,169,327	+				-1.7
1,169,327	+				+0.4
1,169,327	+				+1.9
1,169,327	+				+0.1
1,169,327	+				+0.9
1,169,327	+				+0.2
1,169,327	+				-0.3
1,169,327	+				-1.0
1,169,327	+				-0.7
1,169,327	+				-0.1
1,169,327	+				-0.4
1,169,327	+				-0.4
1,169,327	+				-1.9
1,169,327	+				-0.5
1,169,327	+				+0.4
1,169,327	+				+0.4
1,169,327	+				+0.1
1,169,327	+				-1.8
1,169,327	+				-0.1
1,169,327	+				-1.0
1,169,327	+				-0.1
1,169,327	+				-0.0
1,169,327	+				+0.0
1,169,327	+				-1.1
1,169,327	+				-1.1
1,169,327	+				-0.1
1,169,327	+				-0.8
1,169,327	+				-0.9
1,169,327	+				-0.1
1,169,327	+				-2.3
1,169,327	+				-0.0
1,169,327	+				-0.8
1,169,328	-				-1.2
1,169,328	-				-3.1
1,169,328	-				-0.5
1,169,328	-				-1.0
1,169,328	-				+0.9
1,169,328	-				-0.1
1,169,328	-				+0.2
1,169,328	-				+1.6
1,169,328	-				-0.7
1,169,328	-				-0.0
1,169,328	-				+0.4
1,169,328	-				-1.7
1,169,328	-				-2.5
1,169,328	-				-1.0
1,169,328	-				+1.2
1,169,328	-				-0.8
1,169,328	-				+0.1
1,169,328	-				-0.9
1,169,328	-				-0.8
1,169,328	-				+0.4
1,169,328	-				-1.3
1,169,328	-				-2.0
1,169,328	-				-1.9
1,169,328	-				+0.0
1,169,328	-				+0.6
1,169,328	-				+0.3
1,169,328	-				+0.6
1,169,328	-				-0.1
1,169,328	-				-0.7
1,169,328	-				+0.3
1,169,328	-				+0.2
1,169,328	-				-1.7
1,169,328	-				-0.8
1,169,328	-				-0.9
1,169,328	-				-0.4
1,169,328	-				+0.0
1,169,328	-				+1.4
1,169,328	-				-1.1
1,169,328	-				-1.5
1,169,328	-				-0.4
1,169,328	-				-0.7
1,169,328	-				-0.4
1,169,328	-				+2.4
1,169,328	-				+0.6
1,169,328	-				-0.5
1,169,328	-				-0.4
1,169,328	-				+0.0
1,169,348	+				+2.0
1,169,348	+				+0.3
1,169,348	+				-0.0
1,169,348	+				+0.7
1,169,349	-				-1.0
1,169,349	-				-0.0
1,169,349	-				-1.6
1,169,349	-				+1.0
1,169,461	+				-0.1
1,169,469	+				+0.6
1,169,469	+				-2.5
1,169,469	+				+0.5
1,169,470	-				-1.0
1,169,470	-				-0.1
1,169,470	-				-1.5
1,169,471	+				-0.4
1,169,471	+				-1.4
1,169,471	+				-1.7
1,169,471	+				+1.2
1,169,471	+				-0.0
1,169,471	+				-0.6
1,169,471	+				-0.9
1,169,471	+				-0.1
1,169,471	+				+0.9
1,169,471	+				-0.6
1,169,471	+				-2.1
1,169,471	+				-0.5
1,169,471	+				+1.4
1,169,471	+				-0.6
1,169,471	+				+0.7
1,169,472	-				-0.3
1,169,472	-				-1.1
1,169,472	-				+0.7
1,169,472	-				-1.5
1,169,472	-				-0.3
1,169,628	+		MPMX19_01136	0.17	-0.4
1,169,628	+		MPMX19_01136	0.17	-0.9
1,169,628	+		MPMX19_01136	0.17	-1.3
1,169,628	+		MPMX19_01136	0.17	-0.8
1,169,629	-		MPMX19_01136	0.17	-1.4
1,169,629	-		MPMX19_01136	0.17	-0.1
1,169,629	-		MPMX19_01136	0.17	+0.3
1,169,629	-		MPMX19_01136	0.17	+0.6
1,169,629	-		MPMX19_01136	0.17	-1.3
1,169,629	-		MPMX19_01136	0.17	-1.1
1,169,629	-		MPMX19_01136	0.17	+0.5
1,169,689	+		MPMX19_01136	0.24	+0.4
1,169,689	+		MPMX19_01136	0.24	-0.9
1,169,689	+		MPMX19_01136	0.24	-0.1
1,169,689	+		MPMX19_01136	0.24	+0.8
1,169,689	+		MPMX19_01136	0.24	+0.6
1,169,689	+		MPMX19_01136	0.24	-0.0
1,169,689	+		MPMX19_01136	0.24	+0.4
1,169,690	-		MPMX19_01136	0.24	-1.0
1,169,690	-		MPMX19_01136	0.24	-1.9
1,169,690	-		MPMX19_01136	0.24	-2.6
1,169,690	-		MPMX19_01136	0.24	+1.1
1,169,690	-		MPMX19_01136	0.24	+0.4
1,169,690	-		MPMX19_01136	0.24	+0.1
1,169,690	-		MPMX19_01136	0.24	+1.2
1,169,690	-		MPMX19_01136	0.24	+1.9
1,169,785	+		MPMX19_01136	0.35	-0.3
1,169,785	+		MPMX19_01136	0.35	-0.6
1,169,785	+		MPMX19_01136	0.35	+1.0
1,169,785	+		MPMX19_01136	0.35	-0.6
1,169,785	+		MPMX19_01136	0.35	-1.6
1,169,785	+		MPMX19_01136	0.35	+1.8
1,169,785	+		MPMX19_01136	0.35	+0.0
1,169,785	+		MPMX19_01136	0.35	+0.6
1,169,785	+		MPMX19_01136	0.35	-0.5
1,169,785	+		MPMX19_01136	0.35	-0.3
1,169,786	-		MPMX19_01136	0.35	-0.7
1,169,786	-		MPMX19_01136	0.35	-1.3
1,169,786	-		MPMX19_01136	0.35	+0.2
1,169,798	+		MPMX19_01136	0.37	-0.4
1,169,799	-		MPMX19_01136	0.37	-1.6
1,169,799	-		MPMX19_01136	0.37	-1.9
1,169,896	+		MPMX19_01136	0.48	-0.8
1,169,896	+		MPMX19_01136	0.48	-2.0
1,169,896	+		MPMX19_01136	0.48	-0.2
1,169,896	+		MPMX19_01136	0.48	-0.4
1,169,896	+		MPMX19_01136	0.48	-0.7
1,169,896	+		MPMX19_01136	0.48	-0.4
1,169,897	-		MPMX19_01136	0.48	-0.6
1,169,897	-		MPMX19_01136	0.48	+0.1
1,169,897	-		MPMX19_01136	0.48	-1.0
1,169,897	-		MPMX19_01136	0.48	+1.2
1,169,897	-		MPMX19_01136	0.48	-2.1
1,169,897	-		MPMX19_01136	0.48	-0.1
1,169,897	-		MPMX19_01136	0.48	+0.0
1,169,897	-		MPMX19_01136	0.48	+0.6
1,169,897	-		MPMX19_01136	0.48	+0.2
1,169,897	-		MPMX19_01136	0.48	+0.4
1,169,897	-		MPMX19_01136	0.48	-0.3
1,169,897	-		MPMX19_01136	0.48	+0.0
1,169,897	-		MPMX19_01136	0.48	-0.7
1,169,897	-		MPMX19_01136	0.48	+0.1
1,169,995	+		MPMX19_01136	0.60	-1.1
1,169,995	+		MPMX19_01136	0.60	+0.2
1,169,995	+		MPMX19_01136	0.60	+0.1
1,169,995	+		MPMX19_01136	0.60	-2.1
1,169,995	+		MPMX19_01136	0.60	+1.7
1,169,995	+		MPMX19_01136	0.60	-0.3
1,169,995	+		MPMX19_01136	0.60	-0.1
1,169,995	+		MPMX19_01136	0.60	+0.1
1,169,995	+		MPMX19_01136	0.60	+1.1
1,169,995	+		MPMX19_01136	0.60	+0.8
1,169,995	+		MPMX19_01136	0.60	+1.4
1,169,995	+		MPMX19_01136	0.60	-0.5
1,169,996	-		MPMX19_01136	0.60	+0.6
1,169,996	-		MPMX19_01136	0.60	+0.3
1,169,996	-		MPMX19_01136	0.60	+1.7
1,169,996	-		MPMX19_01136	0.60	-0.7
1,169,996	-		MPMX19_01136	0.60	-0.4
1,169,996	-		MPMX19_01136	0.60	-0.4
1,169,996	-		MPMX19_01136	0.60	-0.9
1,169,996	-		MPMX19_01136	0.60	-1.6
1,169,996	-		MPMX19_01136	0.60	-1.4
1,169,996	-		MPMX19_01136	0.60	+0.5
1,169,996	-		MPMX19_01136	0.60	-1.2
1,169,996	-		MPMX19_01136	0.60	-0.9
1,169,996	-		MPMX19_01136	0.60	-0.9
1,169,996	-		MPMX19_01136	0.60	+0.9
1,169,996	-		MPMX19_01136	0.60	-0.7
1,169,996	-		MPMX19_01136	0.60	+0.2
1,169,996	-		MPMX19_01136	0.60	-1.6
1,170,334	+				+0.6
1,170,335	-				-2.4
1,170,403	+				+0.7
1,170,470	-				+0.1
1,170,475	-				+0.3
1,170,516	+				-0.3
1,170,516	+				-0.6
1,170,517	-				-2.1
1,170,517	-				-1.0
1,170,517	-				+0.9
1,170,522	+				+0.3
1,170,522	+				-0.3
1,170,571	+				-0.6
1,170,571	+				-0.1
1,170,572	-				-0.4
1,170,572	-				-0.1
1,170,572	-				+1.0
1,170,572	-				-0.8
1,170,572	-				+0.1
1,170,572	-				-0.4
1,170,584	-				+0.9
1,170,584	-				+0.1
1,170,619	+				-1.1
1,170,619	+				+0.4
1,170,619	+				-2.0
1,170,619	+				+0.1
1,170,619	+				-2.0
1,170,620	-				-0.0
1,170,620	-				+0.1
1,170,620	-				-0.1
1,170,620	-				-0.4
1,170,620	-				-1.4
1,170,620	-				+0.1
1,170,620	-				+0.1
1,170,620	-				-0.7
1,170,623	+				-0.4
1,170,623	+				+1.5
1,170,624	-				-0.3
1,170,624	-				-0.6
1,170,624	-				-1.6
1,170,624	-				+0.2
1,170,624	-				-0.9
1,170,624	-				+0.3
1,170,626	-				+0.0
1,170,642	-				-0.8
1,170,642	-				+0.5
1,170,642	-				-1.7
1,170,651	+				-1.1
1,170,673	+				-0.1
1,170,673	+				-0.1
1,170,673	+				+1.0
1,170,673	+				+0.1
1,170,686	+				+1.2
1,170,686	+				-0.3
1,170,686	+				-1.4
1,170,687	-				-0.4
1,170,687	-				-1.0
1,170,687	-				-2.0
1,170,687	-				-1.0
1,170,687	-				-1.9
1,170,687	-				-0.1
1,170,687	-				-0.6
1,170,713	+		MPMX19_01137	0.12	+0.2
1,170,714	-		MPMX19_01137	0.12	-0.4
1,170,714	-		MPMX19_01137	0.12	-0.6
1,170,729	-		MPMX19_01137	0.13	-0.4
1,170,729	-		MPMX19_01137	0.13	+1.4
1,170,774	+		MPMX19_01137	0.17	-0.3
1,170,775	-		MPMX19_01137	0.17	-0.6
1,170,775	-		MPMX19_01137	0.17	-0.7
1,170,775	-		MPMX19_01137	0.17	-1.4
1,170,803	+		MPMX19_01137	0.20	-0.5
1,170,803	+		MPMX19_01137	0.20	-0.1
1,170,803	+		MPMX19_01137	0.20	-0.1
1,170,803	+		MPMX19_01137	0.20	-1.7
1,170,803	+		MPMX19_01137	0.20	+1.2
1,170,803	+		MPMX19_01137	0.20	-0.1
1,170,803	+		MPMX19_01137	0.20	-3.0
1,170,803	+		MPMX19_01137	0.20	-0.2
1,170,804	-		MPMX19_01137	0.20	+1.4
1,170,804	-		MPMX19_01137	0.20	-1.0
1,170,804	-		MPMX19_01137	0.20	+0.2
1,170,931	+		MPMX19_01137	0.30	-0.3
1,170,931	+		MPMX19_01137	0.30	+0.2
1,170,931	+		MPMX19_01137	0.30	-1.3
1,170,931	+		MPMX19_01137	0.30	-0.6
1,170,931	+		MPMX19_01137	0.30	+1.4
1,170,931	+		MPMX19_01137	0.30	-0.9
1,170,931	+		MPMX19_01137	0.30	-0.1
1,170,932	-		MPMX19_01137	0.30	-0.4
1,170,932	-		MPMX19_01137	0.30	-0.0
1,170,932	-		MPMX19_01137	0.30	+0.1
1,170,944	+		MPMX19_01137	0.31	-0.7
1,170,945	-		MPMX19_01137	0.32	-0.1
1,170,945	-		MPMX19_01137	0.32	-0.6
1,170,945	-		MPMX19_01137	0.32	-2.5
1,170,958	+		MPMX19_01137	0.33	-2.4
1,170,958	+		MPMX19_01137	0.33	+0.3
1,171,039	+		MPMX19_01137	0.40	-2.6
1,171,054	+		MPMX19_01137	0.41	+1.0
1,171,054	+		MPMX19_01137	0.41	+0.1
1,171,054	+		MPMX19_01137	0.41	-0.7
1,171,055	-		MPMX19_01137	0.41	-1.1
1,171,055	-		MPMX19_01137	0.41	+0.8
1,171,055	-		MPMX19_01137	0.41	-0.1
1,171,064	+		MPMX19_01137	0.42	+0.1
1,171,064	+		MPMX19_01137	0.42	-0.4
1,171,064	+		MPMX19_01137	0.42	+0.7
1,171,064	+		MPMX19_01137	0.42	-2.3
1,171,064	+		MPMX19_01137	0.42	-0.4
1,171,065	-		MPMX19_01137	0.42	-1.9
1,171,065	-		MPMX19_01137	0.42	-0.2
1,171,065	-		MPMX19_01137	0.42	+0.4
1,171,065	-		MPMX19_01137	0.42	+0.3
1,171,073	-		MPMX19_01137	0.42	+0.3
1,171,073	-		MPMX19_01137	0.42	-0.5
1,171,085	+		MPMX19_01137	0.43	-1.0
1,171,086	-		MPMX19_01137	0.43	-1.0
1,171,086	-		MPMX19_01137	0.43	+0.2
1,171,100	+		MPMX19_01137	0.45	+1.4
1,171,100	+		MPMX19_01137	0.45	+0.6
1,171,100	+		MPMX19_01137	0.45	-1.5
1,171,100	+		MPMX19_01137	0.45	+0.9
1,171,100	+		MPMX19_01137	0.45	-0.3
1,171,100	+		MPMX19_01137	0.45	-1.0
1,171,100	+		MPMX19_01137	0.45	-0.3
1,171,101	-		MPMX19_01137	0.45	+0.0
1,171,101	-		MPMX19_01137	0.45	-0.3
1,171,101	-		MPMX19_01137	0.45	+0.4
1,171,101	-		MPMX19_01137	0.45	+0.5
1,171,101	-		MPMX19_01137	0.45	-1.1
1,171,101	-		MPMX19_01137	0.45	-0.2
1,171,106	+		MPMX19_01137	0.45	-1.3
1,171,106	+		MPMX19_01137	0.45	+0.7
1,171,106	+		MPMX19_01137	0.45	-0.3
1,171,107	-		MPMX19_01137	0.45	-1.7
1,171,145	+		MPMX19_01137	0.48	-2.6
1,171,145	+		MPMX19_01137	0.48	+0.1
1,171,145	+		MPMX19_01137	0.48	-1.0
1,171,145	+		MPMX19_01137	0.48	+0.4
1,171,145	+		MPMX19_01137	0.48	-2.0
1,171,145	+		MPMX19_01137	0.48	-0.6
1,171,145	+		MPMX19_01137	0.48	-0.9
1,171,145	+		MPMX19_01137	0.48	-0.8
1,171,146	-		MPMX19_01137	0.49	-0.3
1,171,146	-		MPMX19_01137	0.49	+0.3
1,171,146	-		MPMX19_01137	0.49	+0.4
1,171,146	-		MPMX19_01137	0.49	-0.0
1,171,146	-		MPMX19_01137	0.49	+2.4
1,171,146	-		MPMX19_01137	0.49	-0.5
1,171,165	+		MPMX19_01137	0.50	+0.3
1,171,165	+		MPMX19_01137	0.50	-1.1
1,171,166	-		MPMX19_01137	0.50	-0.3
1,171,166	-		MPMX19_01137	0.50	+0.2
1,171,166	-		MPMX19_01137	0.50	-0.4
1,171,208	+		MPMX19_01137	0.54	+0.1
1,171,208	+		MPMX19_01137	0.54	+0.7
1,171,208	+		MPMX19_01137	0.54	-0.4
1,171,209	-		MPMX19_01137	0.54	-0.1
1,171,209	-		MPMX19_01137	0.54	-0.1
1,171,209	-		MPMX19_01137	0.54	-1.0
1,171,209	-		MPMX19_01137	0.54	-2.0
1,171,209	-		MPMX19_01137	0.54	+1.7
1,171,209	-		MPMX19_01137	0.54	+1.0
1,171,274	+		MPMX19_01137	0.59	+0.3
1,171,275	-		MPMX19_01137	0.59	+1.0
1,171,275	-		MPMX19_01137	0.59	-0.3
1,171,275	-		MPMX19_01137	0.59	-1.1
1,171,275	-		MPMX19_01137	0.59	-0.0
1,171,275	-		MPMX19_01137	0.59	-0.6
1,171,275	-		MPMX19_01137	0.59	-0.4
1,171,328	+		MPMX19_01137	0.64	-0.3
1,171,328	+		MPMX19_01137	0.64	-1.0
1,171,328	+		MPMX19_01137	0.64	-2.3
1,171,328	+		MPMX19_01137	0.64	+1.3
1,171,328	+		MPMX19_01137	0.64	-1.1
1,171,328	+		MPMX19_01137	0.64	-1.4
1,171,328	+		MPMX19_01137	0.64	+0.0
1,171,328	+		MPMX19_01137	0.64	-0.3
1,171,329	-		MPMX19_01137	0.64	-0.3
1,171,329	-		MPMX19_01137	0.64	-0.9
1,171,329	-		MPMX19_01137	0.64	+0.4
1,171,329	-		MPMX19_01137	0.64	-1.6